RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 CEP89Q96ST8 783 aa6.25□□□□□ -1.41
CSDE1-212ENST00000529046 QRSL1Q9H0R6 528 aaKnown RBP6.25□□□□□ -1.41
CSDE1-212ENST00000529046 IFT122Q9HBG6 1241 aa6.25□□□□□ -1.41
CSDE1-212ENST00000529046 USP18Q9UMW8 372 aa6.25□□□□□ -1.41
CSDE1-212ENST00000529046 BCL9LQ86UU0 1499 aa6.25□□□□□ -1.41
CSDE1-212ENST00000529046 IFT172Q9UG01 1749 aa6.25□□□□□ -1.41
CSDE1-212ENST00000529046 DLC1Q96QB1 1528 aa6.25□□□□□ -1.41
CSDE1-212ENST00000529046 SBNO1A3KN83 1393 aa6.24□□□□□ -1.41
CSDE1-212ENST00000529046 FSBPO95073 299 aa6.24□□□□□ -1.41
CSDE1-212ENST00000529046 MT-CO1P00395 513 aa6.24□□□□□ -1.41
CSDE1-212ENST00000529046 MYBL2P10244 700 aa6.24□□□□□ -1.41
CSDE1-212ENST00000529046 MSX2P35548 267 aaPredicted RBP6.24□□□□□ -1.41
CSDE1-212ENST00000529046 WASP42768 502 aa6.24□□□□□ -1.41
CSDE1-212ENST00000529046 ADCY7P51828 1080 aa6.24□□□□□ -1.41
CSDE1-212ENST00000529046 CD69Q07108 199 aa6.24□□□□□ -1.41
CSDE1-212ENST00000529046 MBNL2Q5VZF2 373 aaKnown RBP6.24□□□□□ -1.41
CSDE1-212ENST00000529046 CRIP3Q6Q6R5 217 aa6.24□□□□□ -1.41
CSDE1-212ENST00000529046 Q6ZSN1 163 aa6.24□□□□□ -1.41
CSDE1-212ENST00000529046 GLB1L2Q8IW92 636 aa6.24□□□□□ -1.41
CSDE1-212ENST00000529046 PIK3C3Q8NEB9 887 aa6.24□□□□□ -1.41
CSDE1-212ENST00000529046 SLC7A6OSQ96CW6 309 aaPredicted RBP6.24□□□□□ -1.41
CSDE1-212ENST00000529046 ZNF747Q9BV97 191 aa6.24□□□□□ -1.41
CSDE1-212ENST00000529046 PLA2G3Q9NZ20 509 aa6.24□□□□□ -1.41
CSDE1-212ENST00000529046 DPP7Q9UHL4 492 aa6.24□□□□□ -1.41
CSDE1-212ENST00000529046 EDARQ9UNE0 448 aa6.24□□□□□ -1.41
CSDE1-212ENST00000529046 SLIT2O94813 1529 aa6.24□□□□□ -1.41
CSDE1-212ENST00000529046 ANKARQ7Z5J8 1434 aa6.24□□□□□ -1.41
CSDE1-212ENST00000529046 PLEKHH1Q9ULM0 1364 aa6.23□□□□□ -1.41
CSDE1-212ENST00000529046 E2F8A0AVK6 867 aa6.23□□□□□ -1.41
CSDE1-212ENST00000529046 KLHL33A6NCF5 533 aa6.23□□□□□ -1.41
CSDE1-212ENST00000529046 HNRNPLP14866 589 aaKnown RBP eCLIP6.23□□□□□ -1.415e-8■□□□□ 8.7
CSDE1-212ENST00000529046 FOXL1Q12952 345 aa6.23□□□□□ -1.41
CSDE1-212ENST00000529046 GRM7Q14831 915 aa6.23□□□□□ -1.41
CSDE1-212ENST00000529046 ODF1Q14990 250 aa6.23□□□□□ -1.41
CSDE1-212ENST00000529046 PTPN21Q16825 1174 aa6.23□□□□□ -1.41
CSDE1-212ENST00000529046 GAGE13Q4V321 117 aa6.23□□□□□ -1.41
CSDE1-212ENST00000529046 C19orf54Q5BKX5 351 aa6.23□□□□□ -1.41
CSDE1-212ENST00000529046 ODR4Q5SWX8 454 aa6.23□□□□□ -1.41
CSDE1-212ENST00000529046 PGM2L1Q6PCE3 622 aa6.23□□□□□ -1.41
CSDE1-212ENST00000529046 BTNL9Q6UXG8 535 aa6.23□□□□□ -1.41
CSDE1-212ENST00000529046 TAS1R1Q7RTX1 841 aa6.23□□□□□ -1.41
CSDE1-212ENST00000529046 KRT28Q7Z3Y7 464 aa6.23□□□□□ -1.41
CSDE1-212ENST00000529046 UNC5CLQ8IV45 518 aa6.23□□□□□ -1.41
CSDE1-212ENST00000529046 AMOTL1Q8IY63 956 aa6.23□□□□□ -1.41
CSDE1-212ENST00000529046 HOXB13Q92826 284 aaPredicted RBP6.23□□□□□ -1.41
CSDE1-212ENST00000529046 GCDHQ92947 438 aaPredicted RBP6.23□□□□□ -1.41
CSDE1-212ENST00000529046 FATE1Q969F0 183 aa6.23□□□□□ -1.41
CSDE1-212ENST00000529046 METTL14Q9HCE5 456 aaKnown RBP6.23□□□□□ -1.41
CSDE1-212ENST00000529046 MKS1Q9NXB0 559 aa6.23□□□□□ -1.41
CSDE1-212ENST00000529046 STK26Q9P289 416 aa6.23□□□□□ -1.41
CSDE1-212ENST00000529046 DNAI1Q9UI46 699 aa6.23□□□□□ -1.41
CSDE1-212ENST00000529046 KIF1AQ12756 1690 aa6.23□□□□□ -1.41
CSDE1-212ENST00000529046 ARHGEF10O15013 1369 aa6.22□□□□□ -1.41
CSDE1-212ENST00000529046 EIF3AQ14152 1382 aaKnown RBP6.22□□□□□ -1.41
CSDE1-212ENST00000529046 ZRANB2O95218 330 aaKnown RBP eCLIP6.22□□□□□ -1.41
CSDE1-212ENST00000529046 FSHBP01225 129 aa6.22□□□□□ -1.41
CSDE1-212ENST00000529046 AMHP03971 560 aa6.22□□□□□ -1.41
CSDE1-212ENST00000529046 RECQLP46063 649 aaPredicted RBP6.22□□□□□ -1.41
CSDE1-212ENST00000529046 NRG3P56975 720 aa6.22□□□□□ -1.41
CSDE1-212ENST00000529046 ATP2C1P98194 919 aaPredicted RBP6.22□□□□□ -1.41
CSDE1-212ENST00000529046 PPP3CAQ08209 521 aa6.22□□□□□ -1.41
CSDE1-212ENST00000529046 MALLQ13021 153 aa6.22□□□□□ -1.41
CSDE1-212ENST00000529046 RIN1Q13671 783 aa6.22□□□□□ -1.41
CSDE1-212ENST00000529046 NFE2Q16621 373 aaPredicted RBP6.22□□□□□ -1.41
CSDE1-212ENST00000529046 NRN1LQ496H8 165 aa6.22□□□□□ -1.41
CSDE1-212ENST00000529046 USP39Q53GS9 565 aaKnown RBP6.22□□□□□ -1.41
CSDE1-212ENST00000529046 GJC2Q5T442 439 aaPredicted RBP6.22□□□□□ -1.41
CSDE1-212ENST00000529046 MAMDC4Q6UXC1 1216 aa6.22□□□□□ -1.41
CSDE1-212ENST00000529046 CMTR2Q8IYT2 770 aaKnown RBP6.22□□□□□ -1.41
CSDE1-212ENST00000529046 ZNF808Q8N4W9 903 aaPredicted RBP6.22□□□□□ -1.41
CSDE1-212ENST00000529046 RABGGTAQ92696 567 aa6.22□□□□□ -1.41
CSDE1-212ENST00000529046 TMEM176AQ96HP8 235 aa6.22□□□□□ -1.41
CSDE1-212ENST00000529046 TEKT5Q96M29 485 aa6.22□□□□□ -1.41
CSDE1-212ENST00000529046 SLC6A15Q9H2J7 730 aa6.22□□□□□ -1.41
CSDE1-212ENST00000529046 SRRDQ9UH36 339 aa6.22□□□□□ -1.41
CSDE1-212ENST00000529046 TUBD1Q9UJT1 453 aa6.22□□□□□ -1.41
CSDE1-212ENST00000529046 RBM8AQ9Y5S9 174 aaKnown RBP6.22□□□□□ -1.41
CSDE1-212ENST00000529046 FMN2Q9NZ56 1722 aa6.22□□□□□ -1.41
CSDE1-212ENST00000529046 AKAP10O43572 662 aa6.21□□□□□ -1.42
CSDE1-212ENST00000529046 AKAP8O43823 692 aaKnown RBP6.21□□□□□ -1.42
CSDE1-212ENST00000529046 S100BP04271 92 aaPredicted RBP6.21□□□□□ -1.42
CSDE1-212ENST00000529046 C5AR1P21730 350 aa6.21□□□□□ -1.42
CSDE1-212ENST00000529046 XPAP23025 273 aaPredicted RBP6.21□□□□□ -1.42
CSDE1-212ENST00000529046 GDF5P43026 501 aa6.21□□□□□ -1.42
CSDE1-212ENST00000529046 KIR2DL3P43628 341 aa6.21□□□□□ -1.42
CSDE1-212ENST00000529046 WNT3AP56704 352 aa6.21□□□□□ -1.42
CSDE1-212ENST00000529046 HHEXQ03014 270 aa6.21□□□□□ -1.42
CSDE1-212ENST00000529046 PIN1Q13526 163 aaPredicted RBP6.21□□□□□ -1.42
CSDE1-212ENST00000529046 VPS72Q15906 364 aa6.21□□□□□ -1.42
CSDE1-212ENST00000529046 RNF207Q6ZRF8 634 aa6.21□□□□□ -1.42
CSDE1-212ENST00000529046 ADGRE4PQ86SQ3 457 aa6.21□□□□□ -1.42
CSDE1-212ENST00000529046 ZBTB46Q86UZ6 589 aa6.21□□□□□ -1.42
CSDE1-212ENST00000529046 RAVER1Q8IY67 606 aaKnown RBP6.21□□□□□ -1.42
CSDE1-212ENST00000529046 D2HGDHQ8N465 521 aa6.21□□□□□ -1.42
CSDE1-212ENST00000529046 CPA6Q8N4T0 437 aa6.21□□□□□ -1.42
CSDE1-212ENST00000529046 PLA2G15Q8NCC3 412 aa6.21□□□□□ -1.42
CSDE1-212ENST00000529046 GLB1L3Q8NCI6 653 aaPredicted RBP6.21□□□□□ -1.42
CSDE1-212ENST00000529046 SLC16A11Q8NCK7 471 aa6.21□□□□□ -1.42
CSDE1-212ENST00000529046 HOOK2Q96ED9 719 aa6.21□□□□□ -1.42
CSDE1-212ENST00000529046 PRAM1Q96QH2 718 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms