RNA–Protein interactions for RNA: ENST00000528865.5

CSTF3-208, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 5

Gene CSTF3, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-208ENST00000528865 JPH2Q9BR39 696 aaPredicted RBP8.95□□□□□ -0.98
CSTF3-208ENST00000528865 DCLK3Q9C098 648 aa8.95□□□□□ -0.98
CSTF3-208ENST00000528865 CDC42EP4Q9H3Q1 356 aaKnown RBP8.95□□□□□ -0.98
CSTF3-208ENST00000528865 RAVER2Q9HCJ3 691 aaKnown RBP8.95□□□□□ -0.98
CSTF3-208ENST00000528865 ACP6Q9NPH0 428 aa8.95□□□□□ -0.98
CSTF3-208ENST00000528865 KMT5AQ9NQR1 393 aa8.95□□□□□ -0.98
CSTF3-208ENST00000528865 PXMP2Q9NR77 195 aa8.95□□□□□ -0.98
CSTF3-208ENST00000528865 CHORDC1Q9UHD1 332 aaPredicted RBP8.95□□□□□ -0.98
CSTF3-208ENST00000528865 LGALS13Q9UHV8 139 aa8.95□□□□□ -0.98
CSTF3-208ENST00000528865 CNTN6Q9UQ52 1028 aa8.95□□□□□ -0.98
CSTF3-208ENST00000528865 BCS1LQ9Y276 419 aa8.95□□□□□ -0.98
CSTF3-208ENST00000528865 PCDHA10Q9Y5I2 948 aa8.95□□□□□ -0.98
CSTF3-208ENST00000528865 NFASCO94856 1347 aa8.95□□□□□ -0.98
CSTF3-208ENST00000528865 MYPNQ86TC9 1320 aa8.95□□□□□ -0.98
CSTF3-208ENST00000528865 TMEM150BA6NC51 233 aa8.94□□□□□ -0.98
CSTF3-208ENST00000528865 CLDN3O15551 220 aa8.94□□□□□ -0.98
CSTF3-208ENST00000528865 EXTL3O43909 919 aa8.94□□□□□ -0.98
CSTF3-208ENST00000528865 MGRN1O60291 552 aa8.94□□□□□ -0.98
CSTF3-208ENST00000528865 ZBED4O75132 1171 aa8.94□□□□□ -0.98
CSTF3-208ENST00000528865 TTC4O95801 387 aa8.94□□□□□ -0.98
CSTF3-208ENST00000528865 PIGRP01833 764 aa8.94□□□□□ -0.98
CSTF3-208ENST00000528865 FGFR4P22455 802 aa8.94□□□□□ -0.98
CSTF3-208ENST00000528865 MAPK4P31152 587 aa8.94□□□□□ -0.98
CSTF3-208ENST00000528865 MNAT1P51948 309 aa8.94□□□□□ -0.98
CSTF3-208ENST00000528865 KLF1Q13351 362 aaPredicted RBP8.94□□□□□ -0.98
CSTF3-208ENST00000528865 PPP1R7Q15435 360 aa8.94□□□□□ -0.98
CSTF3-208ENST00000528865 CCNG2Q16589 344 aa8.94□□□□□ -0.98
CSTF3-208ENST00000528865 CCDC142Q17RM4 750 aa8.94□□□□□ -0.98
CSTF3-208ENST00000528865 ZACNQ401N2 412 aa8.94□□□□□ -0.98
CSTF3-208ENST00000528865 SGO2Q562F6 1265 aa8.94□□□□□ -0.98
CSTF3-208ENST00000528865 WLSQ5T9L3 541 aa8.94□□□□□ -0.98
CSTF3-208ENST00000528865 TRIM72Q6ZMU5 477 aa8.94□□□□□ -0.98
CSTF3-208ENST00000528865 NLRX1Q86UT6 975 aa8.94□□□□□ -0.98
CSTF3-208ENST00000528865 KATNAL2Q8IYT4 538 aa8.94□□□□□ -0.98
CSTF3-208ENST00000528865 ANKS4BQ8N8V4 417 aa8.94□□□□□ -0.98
CSTF3-208ENST00000528865 MCPH1Q8NEM0 835 aa8.94□□□□□ -0.98
CSTF3-208ENST00000528865 IPO4Q8TEX9 1081 aaKnown RBP8.94□□□□□ -0.98
CSTF3-208ENST00000528865 CKAP2Q8WWK9 683 aa8.94□□□□□ -0.98
CSTF3-208ENST00000528865 CCDC127Q96BQ5 260 aa8.94□□□□□ -0.98
CSTF3-208ENST00000528865 SGSM3Q96HU1 749 aa8.94□□□□□ -0.98
CSTF3-208ENST00000528865 SELENOSQ9BQE4 189 aa8.94□□□□□ -0.98
CSTF3-208ENST00000528865 TACO1Q9BSH4 297 aaKnown RBP8.94□□□□□ -0.98
CSTF3-208ENST00000528865 TRAIPQ9BWF2 469 aa8.94□□□□□ -0.98
CSTF3-208ENST00000528865 ZNF341Q9BYN7 854 aa8.94□□□□□ -0.98
CSTF3-208ENST00000528865 NSRP1Q9H0G5 558 aaKnown RBP8.94□□□□□ -0.98
CSTF3-208ENST00000528865 CHST7Q9NS84 486 aa8.94□□□□□ -0.98
CSTF3-208ENST00000528865 ARHGAP28Q9P2N2 729 aa8.94□□□□□ -0.98
CSTF3-208ENST00000528865 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.94□□□□□ -0.98
CSTF3-208ENST00000528865 SLC12A4Q9UP95 1085 aa8.94□□□□□ -0.98
CSTF3-208ENST00000528865 PCDHB2Q9Y5E7 798 aa8.94□□□□□ -0.98
CSTF3-208ENST00000528865 MROH7Q68CQ1 1323 aa8.94□□□□□ -0.98
CSTF3-208ENST00000528865 CFAP73A6NFT4 308 aa8.93□□□□□ -0.98
CSTF3-208ENST00000528865 PSTPIP1O43586 416 aa8.93□□□□□ -0.98
CSTF3-208ENST00000528865 C21orf2O43822 256 aa8.93□□□□□ -0.98
CSTF3-208ENST00000528865 ZNF862O60290 1169 aa8.93□□□□□ -0.98
CSTF3-208ENST00000528865 SNX3O60493 162 aa8.93□□□□□ -0.98
CSTF3-208ENST00000528865 DGAT1O75907 488 aa8.93□□□□□ -0.98
CSTF3-208ENST00000528865 RAD17O75943 681 aa8.93□□□□□ -0.98
CSTF3-208ENST00000528865 ABHD2P08910 425 aa8.93□□□□□ -0.98
CSTF3-208ENST00000528865 MYCLP12524 364 aaPredicted RBP8.93□□□□□ -0.98
CSTF3-208ENST00000528865 EIF2AK2P19525 551 aaKnown RBP8.93□□□□□ -0.98
CSTF3-208ENST00000528865 ACO1P21399 889 aaKnown RBP8.93□□□□□ -0.98
CSTF3-208ENST00000528865 RRM1P23921 792 aa8.93□□□□□ -0.98
CSTF3-208ENST00000528865 ATP5DP30049 168 aa8.93□□□□□ -0.98
CSTF3-208ENST00000528865 CHKAP35790 457 aa8.93□□□□□ -0.98
CSTF3-208ENST00000528865 KRT17Q04695 432 aa8.93□□□□□ -0.98
CSTF3-208ENST00000528865 RIPK1Q13546 671 aa8.93□□□□□ -0.98
CSTF3-208ENST00000528865 NBPF9Q3BBW0 867 aa8.93□□□□□ -0.98
CSTF3-208ENST00000528865 GALNTL6Q49A17 601 aa8.93□□□□□ -0.98
CSTF3-208ENST00000528865 PREPLQ4J6C6 727 aaPredicted RBP8.93□□□□□ -0.98
CSTF3-208ENST00000528865 PLA2G4FQ68DD2 849 aa8.93□□□□□ -0.98
CSTF3-208ENST00000528865 PLEKHA7Q6IQ23 1121 aa8.93□□□□□ -0.98
CSTF3-208ENST00000528865 CHADLQ6NUI6 762 aa8.93□□□□□ -0.98
CSTF3-208ENST00000528865 CYB5D1Q6P9G0 228 aa8.93□□□□□ -0.98
CSTF3-208ENST00000528865 DRICH1Q6PGQ1 229 aaPredicted RBP8.93□□□□□ -0.98
CSTF3-208ENST00000528865 VSTM1Q6UX27 236 aa8.93□□□□□ -0.98
CSTF3-208ENST00000528865 NSMFQ6X4W1 530 aa8.93□□□□□ -0.98
CSTF3-208ENST00000528865 CEP128Q6ZU80 1094 aa8.93□□□□□ -0.98
CSTF3-208ENST00000528865 MON1BQ7L1V2 547 aa8.93□□□□□ -0.98
CSTF3-208ENST00000528865 TAS1R3Q7RTX0 852 aa8.93□□□□□ -0.98
CSTF3-208ENST00000528865 PHF13Q86YI8 300 aaPredicted RBP8.93□□□□□ -0.98
CSTF3-208ENST00000528865 PARP9Q8IXQ6 854 aa8.93□□□□□ -0.98
CSTF3-208ENST00000528865 CPXCR1Q8N123 301 aa8.93□□□□□ -0.98
CSTF3-208ENST00000528865 EXD1Q8NHP7 514 aa8.93□□□□□ -0.98
CSTF3-208ENST00000528865 C1orf54Q8WWF1 131 aa8.93□□□□□ -0.98
CSTF3-208ENST00000528865 POMGNT1Q8WZA1 660 aa8.93□□□□□ -0.98
CSTF3-208ENST00000528865 ZKSCAN4Q969J2 545 aaPredicted RBP8.93□□□□□ -0.98
CSTF3-208ENST00000528865 FAM212AQ96EL1 285 aa8.93□□□□□ -0.98
CSTF3-208ENST00000528865 TEPSINQ96N21 525 aa8.93□□□□□ -0.98
CSTF3-208ENST00000528865 RMDN3Q96TC7 470 aa8.93□□□□□ -0.98
CSTF3-208ENST00000528865 PRMT1Q99873 361 aaKnown RBP8.93□□□□□ -0.98
CSTF3-208ENST00000528865 HERPUD2Q9BSE4 406 aa8.93□□□□□ -0.98
CSTF3-208ENST00000528865 DDX23Q9BUQ8 820 aaKnown RBP8.93□□□□□ -0.98
CSTF3-208ENST00000528865 VEZTQ9HBM0 779 aa8.93□□□□□ -0.98
CSTF3-208ENST00000528865 XPNPEP1Q9NQW7 623 aa8.93□□□□□ -0.98
CSTF3-208ENST00000528865 TOPORSQ9NS56 1045 aaPredicted RBP8.93□□□□□ -0.98
CSTF3-208ENST00000528865 EURLQ9NYK6 297 aa8.93□□□□□ -0.98
CSTF3-208ENST00000528865 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.93□□□□□ -0.98
CSTF3-208ENST00000528865 ANAPC7Q9UJX3 599 aa8.93□□□□□ -0.98
CSTF3-208ENST00000528865 ZNRF3Q9ULT6 936 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms