RNA–Protein interactions for RNA: ENST00000528739.5

CAPN1-216, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 341 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-216ENST00000528739 GAP43P17677 238 aa15.59■□□□□ 0.09
CAPN1-216ENST00000528739 MTHFRP42898 656 aa15.59■□□□□ 0.09
CAPN1-216ENST00000528739 DNM1Q05193 864 aaKnown RBP15.59■□□□□ 0.09
CAPN1-216ENST00000528739 PPP2R3AQ06190 1150 aa15.59■□□□□ 0.09
CAPN1-216ENST00000528739 BECN1Q14457 450 aa15.59■□□□□ 0.09
CAPN1-216ENST00000528739 NAB2Q15742 525 aa15.59■□□□□ 0.09
CAPN1-216ENST00000528739 KYAT1Q16773 422 aa15.59■□□□□ 0.09
CAPN1-216ENST00000528739 SYCP3Q8IZU3 236 aa15.59■□□□□ 0.09
CAPN1-216ENST00000528739 NOC3LQ8WTT2 800 aaKnown RBP15.59■□□□□ 0.09
CAPN1-216ENST00000528739 KIF12Q96FN5 646 aa15.59■□□□□ 0.09
CAPN1-216ENST00000528739 DDX27Q96GQ7 796 aaKnown RBP15.59■□□□□ 0.09
CAPN1-216ENST00000528739 NECTIN4Q96NY8 510 aa15.59■□□□□ 0.09
CAPN1-216ENST00000528739 LRRC27Q9C0I9 530 aa15.59■□□□□ 0.09
CAPN1-216ENST00000528739 SFXN1Q9H9B4 322 aa15.59■□□□□ 0.09
CAPN1-216ENST00000528739 CHST7Q9NS84 486 aa15.59■□□□□ 0.09
CAPN1-216ENST00000528739 PANK4Q9NVE7 773 aa15.59■□□□□ 0.09
CAPN1-216ENST00000528739 MORC2Q9Y6X9 1032 aaPredicted RBP15.59■□□□□ 0.09
CAPN1-216ENST00000528739 A0A087X0B3 334 aa15.58■□□□□ 0.08
CAPN1-216ENST00000528739 C19orf67A6NJJ6 358 aa15.58■□□□□ 0.08
CAPN1-216ENST00000528739 I3L4J1 428 aa15.58■□□□□ 0.08
CAPN1-216ENST00000528739 ABLIM1O14639 778 aa15.58■□□□□ 0.08
CAPN1-216ENST00000528739 TNFSF9P41273 254 aa15.58■□□□□ 0.08
CAPN1-216ENST00000528739 BRCC3P46736 316 aa15.58■□□□□ 0.08
CAPN1-216ENST00000528739 GTF2BQ00403 316 aa15.58■□□□□ 0.08
CAPN1-216ENST00000528739 AMPD3Q01432 767 aa15.58■□□□□ 0.08
CAPN1-216ENST00000528739 PSMD5Q16401 504 aa15.58■□□□□ 0.08
CAPN1-216ENST00000528739 UPP1Q16831 310 aa15.58■□□□□ 0.08
CAPN1-216ENST00000528739 SLC10A6Q3KNW5 377 aa15.58■□□□□ 0.08
CAPN1-216ENST00000528739 RTP2Q5QGT7 225 aa15.58■□□□□ 0.08
CAPN1-216ENST00000528739 ATL3Q6DD88 541 aa15.58■□□□□ 0.08
CAPN1-216ENST00000528739 ADALQ6DHV7 355 aa15.58■□□□□ 0.08
CAPN1-216ENST00000528739 ALKAL1Q6UXT8 129 aa15.58■□□□□ 0.08
CAPN1-216ENST00000528739 ZNF720Q7Z2F6 126 aa15.58■□□□□ 0.08
CAPN1-216ENST00000528739 RNF135Q8IUD6 432 aa15.58■□□□□ 0.08
CAPN1-216ENST00000528739 CCDC65Q8IXS2 484 aa15.58■□□□□ 0.08
CAPN1-216ENST00000528739 RNF168Q8IYW5 571 aaPredicted RBP15.58■□□□□ 0.08
CAPN1-216ENST00000528739 IQUBQ8NA54 791 aa15.58■□□□□ 0.08
CAPN1-216ENST00000528739 SUSD6Q92537 303 aa15.58■□□□□ 0.08
CAPN1-216ENST00000528739 C18orf25Q96B23 403 aaPredicted RBP15.58■□□□□ 0.08
CAPN1-216ENST00000528739 ZMAT2Q96NC0 199 aaKnown RBP15.58■□□□□ 0.08
CAPN1-216ENST00000528739 PIDD1Q9HB75 910 aa15.58■□□□□ 0.08
CAPN1-216ENST00000528739 RXFP1Q9HBX9 757 aa15.58■□□□□ 0.08
CAPN1-216ENST00000528739 CNTN3Q9P232 1028 aa15.58■□□□□ 0.08
CAPN1-216ENST00000528739 SEL1LQ9UBV2 794 aa15.58■□□□□ 0.08
CAPN1-216ENST00000528739 EXOC7Q9UPT5 735 aa15.58■□□□□ 0.08
CAPN1-216ENST00000528739 NR2E1Q9Y466 385 aa15.58■□□□□ 0.08
CAPN1-216ENST00000528739 TDRD15B5MCY1 1934 aaKnown RBP15.57■□□□□ 0.08
CAPN1-216ENST00000528739 CCDC195A0A1B0GUA6 201 aa15.57■□□□□ 0.08
CAPN1-216ENST00000528739 FAM86C2PA6NEL3 165 aa15.57■□□□□ 0.08
CAPN1-216ENST00000528739 PI4K2BG5E9Z4 385 aa15.57■□□□□ 0.08
CAPN1-216ENST00000528739 OGTO15294 1046 aa15.57■□□□□ 0.08
CAPN1-216ENST00000528739 DCXO43602 365 aa15.57■□□□□ 0.08
CAPN1-216ENST00000528739 KCNE1P15382 129 aa15.57■□□□□ 0.08
CAPN1-216ENST00000528739 MCM4P33991 863 aa15.57■□□□□ 0.08
CAPN1-216ENST00000528739 SOX4Q06945 474 aaPredicted RBP15.57■□□□□ 0.08
CAPN1-216ENST00000528739 SLFN12LQ6IEE8 588 aa15.57■□□□□ 0.08
CAPN1-216ENST00000528739 PDXDC1Q6P996 788 aa15.57■□□□□ 0.08
CAPN1-216ENST00000528739 SHC4Q6S5L8 630 aa15.57■□□□□ 0.08
CAPN1-216ENST00000528739 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.57■□□□□ 0.08
CAPN1-216ENST00000528739 MAP4K3Q8IVH8 894 aa15.57■□□□□ 0.08
CAPN1-216ENST00000528739 POMGNT1Q8WZA1 660 aa15.57■□□□□ 0.08
CAPN1-216ENST00000528739 ACCSQ96QU6 501 aa15.57■□□□□ 0.08
CAPN1-216ENST00000528739 HAPLN2Q9GZV7 340 aa15.57■□□□□ 0.08
CAPN1-216ENST00000528739 POMKQ9H5K3 350 aa15.57■□□□□ 0.08
CAPN1-216ENST00000528739 PLEKHA5Q9HAU0 1116 aa15.57■□□□□ 0.08
CAPN1-216ENST00000528739 FNIP2Q9P278 1114 aa15.57■□□□□ 0.08
CAPN1-216ENST00000528739 MUTYHQ9UIF7 546 aa15.57■□□□□ 0.08
CAPN1-216ENST00000528739 PCDHA7Q9UN72 937 aa15.57■□□□□ 0.08
CAPN1-216ENST00000528739 PCDHB13Q9Y5F0 798 aa15.57■□□□□ 0.08
CAPN1-216ENST00000528739 BRWD1Q9NSI6 2320 aa15.56■□□□□ 0.08
CAPN1-216ENST00000528739 LACTBL1A8MY62 500 aa15.56■□□□□ 0.08
CAPN1-216ENST00000528739 ANKRD63C9JTQ0 380 aa15.56■□□□□ 0.08
CAPN1-216ENST00000528739 POLR2DO15514 142 aaKnown RBP15.56■□□□□ 0.08
CAPN1-216ENST00000528739 TGM5O43548 720 aa15.56■□□□□ 0.08
CAPN1-216ENST00000528739 XPOTO43592 962 aaKnown RBP15.56■□□□□ 0.08
CAPN1-216ENST00000528739 TKTP29401 623 aaKnown RBP15.56■□□□□ 0.08
CAPN1-216ENST00000528739 RPL9P32969 192 aaKnown RBP15.56■□□□□ 0.08
CAPN1-216ENST00000528739 ACOT2P49753 483 aa15.56■□□□□ 0.08
CAPN1-216ENST00000528739 ARPP19P56211 112 aa15.56■□□□□ 0.08
CAPN1-216ENST00000528739 ASIC1P78348 528 aa15.56■□□□□ 0.08
CAPN1-216ENST00000528739 XKR4Q5GH76 650 aa15.56■□□□□ 0.08
CAPN1-216ENST00000528739 TMEM31Q5JXX7 168 aa15.56■□□□□ 0.08
CAPN1-216ENST00000528739 ZBTB41Q5SVQ8 909 aa15.56■□□□□ 0.08
CAPN1-216ENST00000528739 DNAJC19Q96DA6 116 aa15.56■□□□□ 0.08
CAPN1-216ENST00000528739 FIZ1Q96SL8 496 aa15.56■□□□□ 0.08
CAPN1-216ENST00000528739 AGO2Q9UKV8 859 aaKnown RBP15.56■□□□□ 0.08
CAPN1-216ENST00000528739 A0A0B4J269 797 aa15.55■□□□□ 0.08
CAPN1-216ENST00000528739 LOC730098B7Z3J9 87 aa15.55■□□□□ 0.08
CAPN1-216ENST00000528739 TISP43B9A030 160 aa15.55■□□□□ 0.08
CAPN1-216ENST00000528739 TMEM189-UBE2V1I3L0A0 370 aa15.55■□□□□ 0.08
CAPN1-216ENST00000528739 RFPL2O75678 378 aa15.55■□□□□ 0.08
CAPN1-216ENST00000528739 EFEMP2O95967 443 aa15.55■□□□□ 0.08
CAPN1-216ENST00000528739 PIGRP01833 764 aa15.55■□□□□ 0.08
CAPN1-216ENST00000528739 IGFBP6P24592 240 aaPredicted RBP15.55■□□□□ 0.08
CAPN1-216ENST00000528739 POSTNQ15063 836 aa15.55■□□□□ 0.08
CAPN1-216ENST00000528739 LIN9Q5TKA1 542 aa15.55■□□□□ 0.08
CAPN1-216ENST00000528739 CEP57L1Q8IYX8 460 aa15.55■□□□□ 0.08
CAPN1-216ENST00000528739 KREMEN2Q8NCW0 462 aa15.55■□□□□ 0.08
CAPN1-216ENST00000528739 LNX1Q8TBB1 728 aaPredicted RBP15.55■□□□□ 0.08
CAPN1-216ENST00000528739 PIK3R5Q8WYR1 880 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms