RNA–Protein interactions for RNA: ENST00000528621.5

CTNND1-219, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,907 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-219ENST00000528621 RASGRP2Q7LDG7 609 aa8.96□□□□□ -0.98
CTNND1-219ENST00000528621 SZRD1Q7Z422 152 aa8.96□□□□□ -0.98
CTNND1-219ENST00000528621 LCA5Q86VQ0 697 aa8.96□□□□□ -0.98
CTNND1-219ENST00000528621 NUDCD3Q8IVD9 361 aa8.96□□□□□ -0.98
CTNND1-219ENST00000528621 TRIML2Q8N7C3 387 aa8.96□□□□□ -0.98
CTNND1-219ENST00000528621 RNF149Q8NC42 400 aa8.96□□□□□ -0.98
CTNND1-219ENST00000528621 ASIC4Q96FT7 647 aa8.96□□□□□ -0.98
CTNND1-219ENST00000528621 MKNK1Q9BUB5 465 aa8.96□□□□□ -0.98
CTNND1-219ENST00000528621 GPBP1L1Q9HC44 474 aaPredicted RBP8.96□□□□□ -0.98
CTNND1-219ENST00000528621 STOML1Q9UBI4 398 aa8.96□□□□□ -0.98
CTNND1-219ENST00000528621 NRXN1Q9ULB1 1477 aa8.96□□□□□ -0.98
CTNND1-219ENST00000528621 AGLP35573 1532 aa8.96□□□□□ -0.98
CTNND1-219ENST00000528621 PRPF4O43172 522 aaKnown RBP eCLIP8.96□□□□□ -0.984e-8■□□□□ 10.4
CTNND1-219ENST00000528621 E2F6O75461 281 aa8.96□□□□□ -0.98
CTNND1-219ENST00000528621 CAMTA2O94983 1202 aa8.96□□□□□ -0.98
CTNND1-219ENST00000528621 PEX19P40855 299 aa8.96□□□□□ -0.98
CTNND1-219ENST00000528621 PRAMEP78395 509 aa8.96□□□□□ -0.98
CTNND1-219ENST00000528621 TMEM132DQ14C87 1099 aa8.96□□□□□ -0.98
CTNND1-219ENST00000528621 MORF4L2Q15014 288 aa8.96□□□□□ -0.98
CTNND1-219ENST00000528621 P3H1Q32P28 736 aa8.96□□□□□ -0.98
CTNND1-219ENST00000528621 STOX1Q6ZVD7 989 aa8.96□□□□□ -0.98
CTNND1-219ENST00000528621 RPAINQ86UA6 219 aa8.96□□□□□ -0.98
CTNND1-219ENST00000528621 GLYCTKQ8IVS8 523 aa8.96□□□□□ -0.98
CTNND1-219ENST00000528621 PDLIM2Q96JY6 352 aa8.96□□□□□ -0.98
CTNND1-219ENST00000528621 ZNF668Q96K58 619 aaPredicted RBP8.96□□□□□ -0.98
CTNND1-219ENST00000528621 TRIM9Q9C026 710 aa8.96□□□□□ -0.98
CTNND1-219ENST00000528621 NDFIP2Q9NV92 336 aa8.96□□□□□ -0.98
CTNND1-219ENST00000528621 ZNF70Q9UC06 446 aaPredicted RBP8.96□□□□□ -0.98
CTNND1-219ENST00000528621 ZBBXA8MT70 800 aa8.96□□□□□ -0.98
CTNND1-219ENST00000528621 NBPF26B4DH59 902 aa8.96□□□□□ -0.98
CTNND1-219ENST00000528621 PYGLP06737 847 aa8.96□□□□□ -0.98
CTNND1-219ENST00000528621 AARSP49588 968 aaKnown RBP eCLIP8.96□□□□□ -0.983e-6■□□□□ 10.9
CTNND1-219ENST00000528621 SCARF1Q14162 830 aa8.96□□□□□ -0.98
CTNND1-219ENST00000528621 YAF2Q8IY57 180 aa8.96□□□□□ -0.98
CTNND1-219ENST00000528621 NBPF15Q8N660 670 aa8.96□□□□□ -0.98
CTNND1-219ENST00000528621 N4BP2L2Q92802 583 aaPredicted RBP8.96□□□□□ -0.98
CTNND1-219ENST00000528621 PARK7Q99497 189 aaKnown RBP8.96□□□□□ -0.98
CTNND1-219ENST00000528621 RIT2Q99578 217 aa8.96□□□□□ -0.98
CTNND1-219ENST00000528621 STX18Q9P2W9 335 aaKnown RBP8.96□□□□□ -0.98
CTNND1-219ENST00000528621 TJP2Q9UDY2 1190 aa8.96□□□□□ -0.98
CTNND1-219ENST00000528621 IQGAP1P46940 1657 aa8.96□□□□□ -0.98
CTNND1-219ENST00000528621 PFDN1O60925 122 aa8.95□□□□□ -0.98
CTNND1-219ENST00000528621 ABCE1P61221 599 aaKnown RBP8.95□□□□□ -0.98
CTNND1-219ENST00000528621 EMC2Q15006 297 aa8.95□□□□□ -0.98
CTNND1-219ENST00000528621 SV2CQ496J9 727 aa8.95□□□□□ -0.98
CTNND1-219ENST00000528621 AGBL2Q5U5Z8 902 aa8.95□□□□□ -0.98
CTNND1-219ENST00000528621 TBC1D19Q8N5T2 526 aa8.95□□□□□ -0.98
CTNND1-219ENST00000528621 ASPSCR1Q9BZE9 553 aa8.95□□□□□ -0.98
CTNND1-219ENST00000528621 SNX12Q9UMY4 172 aa8.95□□□□□ -0.98
CTNND1-219ENST00000528621 UBA6A0AVT1 1052 aaPredicted RBP8.95□□□□□ -0.98
CTNND1-219ENST00000528621 KCNN4O15554 427 aa8.95□□□□□ -0.98
CTNND1-219ENST00000528621 FMO5P49326 533 aa8.95□□□□□ -0.98
CTNND1-219ENST00000528621 SNAPC2Q13487 334 aa8.95□□□□□ -0.98
CTNND1-219ENST00000528621 TERF2Q15554 542 aa8.95□□□□□ -0.98
CTNND1-219ENST00000528621 HIF1AQ16665 826 aa8.95□□□□□ -0.98
CTNND1-219ENST00000528621 FAM47EQ6ZV65 393 aa8.95□□□□□ -0.98
CTNND1-219ENST00000528621 LINC00116Q8NCU8 138 aa8.95□□□□□ -0.98
CTNND1-219ENST00000528621 SLC35G2Q8TBE7 412 aa8.95□□□□□ -0.98
CTNND1-219ENST00000528621 REEP2Q9BRK0 252 aa8.95□□□□□ -0.98
CTNND1-219ENST00000528621 DDX47Q9H0S4 455 aaKnown RBP8.95□□□□□ -0.98
CTNND1-219ENST00000528621 KDM4CQ9H3R0 1056 aa8.95□□□□□ -0.98
CTNND1-219ENST00000528621 COG4Q9H9E3 785 aa8.95□□□□□ -0.98
CTNND1-219ENST00000528621 DYRK4Q9NR20 520 aa8.95□□□□□ -0.98
CTNND1-219ENST00000528621 USP27XA6NNY8 438 aa8.95□□□□□ -0.98
CTNND1-219ENST00000528621 GAS2O43903 313 aaKnown RBP8.95□□□□□ -0.98
CTNND1-219ENST00000528621 EXTL3O43909 919 aa8.95□□□□□ -0.98
CTNND1-219ENST00000528621 CDC42EP5Q6NZY7 148 aa8.95□□□□□ -0.98
CTNND1-219ENST00000528621 ARHGAP18Q8N392 663 aa8.95□□□□□ -0.98
CTNND1-219ENST00000528621 RIBC1Q8N443 379 aaPredicted RBP8.95□□□□□ -0.98
CTNND1-219ENST00000528621 CCNYL1Q8N7R7 359 aa8.95□□□□□ -0.98
CTNND1-219ENST00000528621 ZNF280CQ8ND82 737 aa8.95□□□□□ -0.98
CTNND1-219ENST00000528621 RNPC3Q96LT9 517 aaKnown RBP8.95□□□□□ -0.98
CTNND1-219ENST00000528621 MOV10L1Q9BXT6 1211 aaKnown RBP8.95□□□□□ -0.98
CTNND1-219ENST00000528621 WWP1Q9H0M0 922 aa8.95□□□□□ -0.98
CTNND1-219ENST00000528621 DIAPH2O60879 1101 aa8.95□□□□□ -0.98
CTNND1-219ENST00000528621 CYBBP04839 570 aa8.95□□□□□ -0.98
CTNND1-219ENST00000528621 BRAFP15056 766 aa8.95□□□□□ -0.98
CTNND1-219ENST00000528621 NR1I3Q14994 352 aa8.95□□□□□ -0.98
CTNND1-219ENST00000528621 NAB2Q15742 525 aa8.95□□□□□ -0.98
CTNND1-219ENST00000528621 DDIASQ8IXT1 998 aa8.95□□□□□ -0.98
CTNND1-219ENST00000528621 TEX13BQ9BXU2 312 aa8.95□□□□□ -0.98
CTNND1-219ENST00000528621 ANKEF1Q9NU02 776 aa8.95□□□□□ -0.98
CTNND1-219ENST00000528621 AFF4Q9UHB7 1163 aaKnown RBP8.95□□□□□ -0.98
CTNND1-219ENST00000528621 SPATA31A1Q5TZJ5 1347 aa8.95□□□□□ -0.98
CTNND1-219ENST00000528621 KBTBD13C9JR72 458 aa8.95□□□□□ -0.98
CTNND1-219ENST00000528621 FAM151AQ8WW52 585 aa8.95□□□□□ -0.98
CTNND1-219ENST00000528621 C18orf8Q96DM3 657 aa8.95□□□□□ -0.98
CTNND1-219ENST00000528621 ARHGEF26Q96DR7 871 aa8.95□□□□□ -0.98
CTNND1-219ENST00000528621 TUBE1Q9UJT0 475 aa8.95□□□□□ -0.98
CTNND1-219ENST00000528621 DIP2BQ9P265 1576 aa8.94□□□□□ -0.98
CTNND1-219ENST00000528621 STK25O00506 426 aa8.94□□□□□ -0.98
CTNND1-219ENST00000528621 TNPO2O14787 897 aaKnown RBP8.94□□□□□ -0.98
CTNND1-219ENST00000528621 KCNQ2O43526 872 aa8.94□□□□□ -0.98
CTNND1-219ENST00000528621 DNAJC6O75061 913 aa8.94□□□□□ -0.98
CTNND1-219ENST00000528621 MYBP10242 640 aa8.94□□□□□ -0.98
CTNND1-219ENST00000528621 CHRNA5P30532 468 aa8.94□□□□□ -0.98
CTNND1-219ENST00000528621 UGP2Q16851 508 aa8.94□□□□□ -0.98
CTNND1-219ENST00000528621 LMBRD2Q68DH5 695 aaPredicted RBP8.94□□□□□ -0.98
CTNND1-219ENST00000528621 ANKS3Q6ZW76 656 aa8.94□□□□□ -0.98
CTNND1-219ENST00000528621 HIPK4Q8NE63 616 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms