RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 ACOT2P49753 483 aa18.98■□□□□ 0.63
LTBP3-210ENST00000528516 DNAJC3Q13217 504 aa18.98■□□□□ 0.63
LTBP3-210ENST00000528516 GADL1Q6ZQY3 521 aa18.98■□□□□ 0.63
LTBP3-210ENST00000528516 AMIGO3Q86WK7 504 aa18.98■□□□□ 0.63
LTBP3-210ENST00000528516 VCX3BQ9H321 246 aa18.98■□□□□ 0.63
LTBP3-210ENST00000528516 ERVK-5Q9HDB9 667 aa18.98■□□□□ 0.63
LTBP3-210ENST00000528516 VCX3AQ9NNX9 186 aa18.98■□□□□ 0.63
LTBP3-210ENST00000528516 PPP1R9AQ9ULJ8 1098 aa18.98■□□□□ 0.63
LTBP3-210ENST00000528516 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.98■□□□□ 0.63
LTBP3-210ENST00000528516 CBX6O95503 412 aa18.98■□□□□ 0.63
LTBP3-210ENST00000528516 SETSIPP0DME0 302 aa18.98■□□□□ 0.63
LTBP3-210ENST00000528516 NPR1P16066 1061 aa18.98■□□□□ 0.63
LTBP3-210ENST00000528516 RPL21P46778 160 aaKnown RBP18.98■□□□□ 0.63
LTBP3-210ENST00000528516 PDIA5Q14554 519 aa18.98■□□□□ 0.63
LTBP3-210ENST00000528516 SWSAP1Q6NVH7 229 aa18.98■□□□□ 0.63
LTBP3-210ENST00000528516 SLC7A3Q8WY07 619 aa18.98■□□□□ 0.63
LTBP3-210ENST00000528516 NUP85Q9BW27 656 aa18.98■□□□□ 0.63
LTBP3-210ENST00000528516 PRR12Q9ULL5 1215 aa18.98■□□□□ 0.63
LTBP3-210ENST00000528516 RIPK2O43353 540 aa18.98■□□□□ 0.63
LTBP3-210ENST00000528516 ATP9AO75110 1047 aa18.98■□□□□ 0.63
LTBP3-210ENST00000528516 SPAG7O75391 227 aa18.98■□□□□ 0.63
LTBP3-210ENST00000528516 CA4P22748 312 aa18.98■□□□□ 0.63
LTBP3-210ENST00000528516 VAMP7P51809 220 aa18.98■□□□□ 0.63
LTBP3-210ENST00000528516 CACNA2D1P54289 1103 aa18.98■□□□□ 0.63
LTBP3-210ENST00000528516 YARSP54577 528 aaKnown RBP18.98■□□□□ 0.63
LTBP3-210ENST00000528516 C6orf163Q5TEZ5 329 aa18.98■□□□□ 0.63
LTBP3-210ENST00000528516 CEP128Q6ZU80 1094 aa18.98■□□□□ 0.63
LTBP3-210ENST00000528516 LDHDQ86WU2 507 aa18.98■□□□□ 0.63
LTBP3-210ENST00000528516 CCDC110Q8TBZ0 833 aa18.98■□□□□ 0.63
LTBP3-210ENST00000528516 FBXO41Q8TF61 875 aa18.98■□□□□ 0.63
LTBP3-210ENST00000528516 FAM84AQ96KN4 292 aa18.98■□□□□ 0.63
LTBP3-210ENST00000528516 ACP6Q9NPH0 428 aa18.98■□□□□ 0.63
LTBP3-210ENST00000528516 DDTLA6NHG4 134 aaPredicted RBP18.97■□□□□ 0.63
LTBP3-210ENST00000528516 H7C0C1 242 aa18.97■□□□□ 0.63
LTBP3-210ENST00000528516 ATP5OP48047 213 aa18.97■□□□□ 0.63
LTBP3-210ENST00000528516 DHX34Q14147 1143 aaKnown RBP18.97■□□□□ 0.63
LTBP3-210ENST00000528516 DUPD1Q68J44 220 aa18.97■□□□□ 0.63
LTBP3-210ENST00000528516 HAUS6Q7Z4H7 955 aa18.97■□□□□ 0.63
LTBP3-210ENST00000528516 FAM13CQ8NE31 585 aa18.97■□□□□ 0.63
LTBP3-210ENST00000528516 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.97■□□□□ 0.63
LTBP3-210ENST00000528516 CPA5Q8WXQ8 436 aa18.97■□□□□ 0.63
LTBP3-210ENST00000528516 AGBL1Q96MI9 1066 aa18.97■□□□□ 0.63
LTBP3-210ENST00000528516 ANKRD27Q96NW4 1050 aa18.97■□□□□ 0.63
LTBP3-210ENST00000528516 DDX4Q9NQI0 724 aaKnown RBP18.97■□□□□ 0.63
LTBP3-210ENST00000528516 AIPL1Q9NZN9 384 aa18.97■□□□□ 0.63
LTBP3-210ENST00000528516 GPR75-ASB3A0A0A6YYF3 556 aa18.97■□□□□ 0.63
LTBP3-210ENST00000528516 K7ERI5 159 aa18.97■□□□□ 0.63
LTBP3-210ENST00000528516 RCN1Q15293 331 aa18.97■□□□□ 0.63
LTBP3-210ENST00000528516 CEP55Q53EZ4 464 aa18.97■□□□□ 0.63
LTBP3-210ENST00000528516 ZNF513Q8N8E2 541 aaPredicted RBP18.97■□□□□ 0.63
LTBP3-210ENST00000528516 LRRC57Q8N9N7 239 aa18.97■□□□□ 0.63
LTBP3-210ENST00000528516 ATP8B4Q8TF62 1192 aa18.97■□□□□ 0.63
LTBP3-210ENST00000528516 AHDC1Q5TGY3 1603 aaPredicted RBP18.97■□□□□ 0.63
LTBP3-210ENST00000528516 ARFGEF2Q9Y6D5 1785 aa18.97■□□□□ 0.63
LTBP3-210ENST00000528516 CLDN3O15551 220 aa18.97■□□□□ 0.63
LTBP3-210ENST00000528516 AKAP3O75969 853 aa18.97■□□□□ 0.63
LTBP3-210ENST00000528516 NPTXRO95502 500 aa18.97■□□□□ 0.63
LTBP3-210ENST00000528516 PRELPP51888 382 aa18.97■□□□□ 0.63
LTBP3-210ENST00000528516 ACSF2Q96CM8 615 aaPredicted RBP18.97■□□□□ 0.63
LTBP3-210ENST00000528516 IWS1Q96ST2 819 aa18.97■□□□□ 0.63
LTBP3-210ENST00000528516 GABBR1Q9UBS5 961 aa18.97■□□□□ 0.63
LTBP3-210ENST00000528516 GOLGA8RI6L899 631 aa18.96■□□□□ 0.63
LTBP3-210ENST00000528516 MAP3K13O43283 966 aa18.96■□□□□ 0.63
LTBP3-210ENST00000528516 TMEM39BQ9GZU3 492 aa18.96■□□□□ 0.63
LTBP3-210ENST00000528516 WDR35Q9P2L0 1181 aa18.96■□□□□ 0.63
LTBP3-210ENST00000528516 ATP5HO75947 161 aa18.96■□□□□ 0.63
LTBP3-210ENST00000528516 TPBGLP0DKB5 382 aa18.96■□□□□ 0.63
LTBP3-210ENST00000528516 EAPPQ56P03 285 aaPredicted RBP18.96■□□□□ 0.63
LTBP3-210ENST00000528516 ECHDC2Q86YB7 292 aa18.96■□□□□ 0.63
LTBP3-210ENST00000528516 POP1Q99575 1024 aaKnown RBP18.96■□□□□ 0.63
LTBP3-210ENST00000528516 DDX50Q9BQ39 737 aaKnown RBP18.96■□□□□ 0.63
LTBP3-210ENST00000528516 SEPT10Q9P0V9 454 aa18.96■□□□□ 0.63
LTBP3-210ENST00000528516 EXOC1LA0A1B0GW35 172 aa18.96■□□□□ 0.63
LTBP3-210ENST00000528516 BAG2O95816 211 aa18.96■□□□□ 0.63
LTBP3-210ENST00000528516 KRT1P04264 644 aa18.96■□□□□ 0.63
LTBP3-210ENST00000528516 SOX10P56693 466 aa18.96■□□□□ 0.63
LTBP3-210ENST00000528516 SLC5A9Q2M3M2 681 aa18.96■□□□□ 0.63
LTBP3-210ENST00000528516 TRIM59Q8IWR1 403 aa18.96■□□□□ 0.63
LTBP3-210ENST00000528516 RBBP8NLQ8NC74 664 aaPredicted RBP18.96■□□□□ 0.63
LTBP3-210ENST00000528516 ZNF564Q8TBZ8 553 aaPredicted RBP18.96■□□□□ 0.63
LTBP3-210ENST00000528516 RBM41Q96IZ5 413 aaKnown RBP18.96■□□□□ 0.63
LTBP3-210ENST00000528516 TBC1D10AQ9BXI6 508 aa18.96■□□□□ 0.63
LTBP3-210ENST00000528516 KIAA1683Q9H0B3 1180 aa18.96■□□□□ 0.63
LTBP3-210ENST00000528516 ADAMTS7Q9UKP4 1686 aa18.96■□□□□ 0.63
LTBP3-210ENST00000528516 KIAA0391O15091 583 aaKnown RBP18.95■□□□□ 0.62
LTBP3-210ENST00000528516 CLUL1Q15846 466 aa18.95■□□□□ 0.62
LTBP3-210ENST00000528516 SCFD1Q8WVM8 642 aa18.95■□□□□ 0.62
LTBP3-210ENST00000528516 FAM20AQ96MK3 541 aa18.95■□□□□ 0.62
LTBP3-210ENST00000528516 PNMA5Q96PV4 448 aa18.95■□□□□ 0.62
LTBP3-210ENST00000528516 RTFDC1Q9BY42 306 aaPredicted RBP18.95■□□□□ 0.62
LTBP3-210ENST00000528516 DCTN4Q9UJW0 460 aa18.95■□□□□ 0.62
LTBP3-210ENST00000528516 SLIT2O94813 1529 aa18.95■□□□□ 0.62
LTBP3-210ENST00000528516 PODXLO00592 558 aa18.95■□□□□ 0.62
LTBP3-210ENST00000528516 TXNDC9O14530 226 aa18.95■□□□□ 0.62
LTBP3-210ENST00000528516 VHLP40337 213 aa18.95■□□□□ 0.62
LTBP3-210ENST00000528516 GPC5P78333 572 aa18.95■□□□□ 0.62
LTBP3-210ENST00000528516 CDR2Q01850 454 aa18.95■□□□□ 0.62
LTBP3-210ENST00000528516 KYNUQ16719 465 aa18.95■□□□□ 0.62
LTBP3-210ENST00000528516 CFAP157Q5JU67 520 aa18.95■□□□□ 0.62
LTBP3-210ENST00000528516 SNX30Q5VWJ9 437 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms