RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 METTL14Q9HCE5 456 aaKnown RBP7.47□□□□□ -1.21
PCF11-202ENST00000528336 EIF2B4Q9UI10 523 aaKnown RBP7.47□□□□□ -1.21
PCF11-202ENST00000528336 SORCS3Q9UPU3 1222 aa7.47□□□□□ -1.21
PCF11-202ENST00000528336 SCRIBQ14160 1630 aa7.47□□□□□ -1.21
PCF11-202ENST00000528336 LEFTY2O00292 366 aa7.46□□□□□ -1.22
PCF11-202ENST00000528336 FAM20BO75063 409 aa7.46□□□□□ -1.22
PCF11-202ENST00000528336 OFD1O75665 1012 aa7.46□□□□□ -1.22
PCF11-202ENST00000528336 RFPL1O75677 317 aa7.46□□□□□ -1.22
PCF11-202ENST00000528336 POMCP01189 267 aa7.46□□□□□ -1.22
PCF11-202ENST00000528336 INSRRP14616 1297 aa7.46□□□□□ -1.22
PCF11-202ENST00000528336 APOBEC3AP31941 199 aaPredicted RBP7.46□□□□□ -1.22
PCF11-202ENST00000528336 CHN2P52757 468 aa7.46□□□□□ -1.22
PCF11-202ENST00000528336 NHLH2Q02577 135 aa7.46□□□□□ -1.22
PCF11-202ENST00000528336 PGS1Q32NB8 556 aa7.46□□□□□ -1.22
PCF11-202ENST00000528336 DRICH1Q6PGQ1 229 aaPredicted RBP7.46□□□□□ -1.22
PCF11-202ENST00000528336 SYT12Q8IV01 421 aa7.46□□□□□ -1.22
PCF11-202ENST00000528336 MVB12AQ96EY5 273 aa7.46□□□□□ -1.22
PCF11-202ENST00000528336 MAP3K14Q99558 947 aa7.46□□□□□ -1.22
PCF11-202ENST00000528336 NDC1Q9BTX1 674 aa7.46□□□□□ -1.22
PCF11-202ENST00000528336 UNC13AQ9UPW8 1703 aa7.45□□□□□ -1.22
PCF11-202ENST00000528336 DRGXA6NNA5 263 aa7.45□□□□□ -1.22
PCF11-202ENST00000528336 PRPF3O43395 683 aaKnown RBP7.45□□□□□ -1.22
PCF11-202ENST00000528336 MGAT1P26572 445 aa7.45□□□□□ -1.22
PCF11-202ENST00000528336 RAB39AQ14964 217 aa7.45□□□□□ -1.22
PCF11-202ENST00000528336 UBXN2BQ14CS0 331 aa7.45□□□□□ -1.22
PCF11-202ENST00000528336 ATP2B3Q16720 1220 aa7.45□□□□□ -1.22
PCF11-202ENST00000528336 NAIF1Q69YI7 327 aaPredicted RBP7.45□□□□□ -1.22
PCF11-202ENST00000528336 RNF207Q6ZRF8 634 aa7.45□□□□□ -1.22
PCF11-202ENST00000528336 SEM1Q6ZVN7 128 aa7.45□□□□□ -1.22
PCF11-202ENST00000528336 HTR3DQ70Z44 454 aa7.45□□□□□ -1.22
PCF11-202ENST00000528336 MED25Q71SY5 747 aa7.45□□□□□ -1.22
PCF11-202ENST00000528336 PLXDC1Q8IUK5 500 aa7.45□□□□□ -1.22
PCF11-202ENST00000528336 DCBLD1Q8N8Z6 715 aa7.45□□□□□ -1.22
PCF11-202ENST00000528336 TSR2Q969E8 191 aaKnown RBP7.45□□□□□ -1.22
PCF11-202ENST00000528336 HPS3Q969F9 1004 aa7.45□□□□□ -1.22
PCF11-202ENST00000528336 FAM193BQ96PV7 902 aaPredicted RBP7.45□□□□□ -1.22
PCF11-202ENST00000528336 C11orf54Q9H0W9 315 aaPredicted RBP7.45□□□□□ -1.22
PCF11-202ENST00000528336 AURKAIP1Q9NWT8 199 aaPredicted RBP7.45□□□□□ -1.22
PCF11-202ENST00000528336 PCDHA3Q9Y5H8 950 aa7.45□□□□□ -1.22
PCF11-202ENST00000528336 KRTAP4-8A0A0G2JLE6 195 aa7.44□□□□□ -1.22
PCF11-202ENST00000528336 PLEKHD1A6NEE1 506 aa7.44□□□□□ -1.22
PCF11-202ENST00000528336 TSPAN6O43657 245 aa7.44□□□□□ -1.22
PCF11-202ENST00000528336 SCAF4O95104 1147 aaKnown RBP7.44□□□□□ -1.22
PCF11-202ENST00000528336 HSPA6P17066 643 aa7.44□□□□□ -1.22
PCF11-202ENST00000528336 SLC6A2P23975 617 aa7.44□□□□□ -1.22
PCF11-202ENST00000528336 SMARCA1P28370 1054 aa7.44□□□□□ -1.22
PCF11-202ENST00000528336 RNASE9P60153 205 aaKnown RBP7.44□□□□□ -1.22
PCF11-202ENST00000528336 KRTAP10-2P60368 255 aa7.44□□□□□ -1.22
PCF11-202ENST00000528336 TLE1Q04724 770 aa7.44□□□□□ -1.22
PCF11-202ENST00000528336 NOL8Q76FK4 1167 aaKnown RBP7.44□□□□□ -1.22
PCF11-202ENST00000528336 C3orf20Q8ND61 904 aa7.44□□□□□ -1.22
PCF11-202ENST00000528336 CPT1CQ8TCG5 803 aa7.44□□□□□ -1.22
PCF11-202ENST00000528336 RGMAQ96B86 450 aa7.44□□□□□ -1.22
PCF11-202ENST00000528336 CLIP3Q96DZ5 547 aa7.44□□□□□ -1.22
PCF11-202ENST00000528336 PLEKHG4BQ96PX9 1271 aa7.44□□□□□ -1.22
PCF11-202ENST00000528336 SLC12A5Q9H2X9 1139 aa7.44□□□□□ -1.22
PCF11-202ENST00000528336 GSTO2Q9H4Y5 243 aa7.44□□□□□ -1.22
PCF11-202ENST00000528336 ANLNQ9NQW6 1124 aa7.44□□□□□ -1.22
PCF11-202ENST00000528336 FBXO34Q9NWN3 711 aa7.44□□□□□ -1.22
PCF11-202ENST00000528336 CALCOCO1Q9P1Z2 691 aa7.44□□□□□ -1.22
PCF11-202ENST00000528336 BICRAQ9NZM4 1560 aa7.43□□□□□ -1.22
PCF11-202ENST00000528336 GRM6O15303 877 aa7.43□□□□□ -1.22
PCF11-202ENST00000528336 FTLP02792 175 aaPredicted RBP7.43□□□□□ -1.22
PCF11-202ENST00000528336 AMHP03971 560 aa7.43□□□□□ -1.22
PCF11-202ENST00000528336 ITGB1P05556 798 aa7.43□□□□□ -1.22
PCF11-202ENST00000528336 C1SP09871 688 aa7.43□□□□□ -1.22
PCF11-202ENST00000528336 SBK3P0C264 359 aa7.43□□□□□ -1.22
PCF11-202ENST00000528336 MALP21145 153 aa7.43□□□□□ -1.22
PCF11-202ENST00000528336 LPOP22079 712 aaPredicted RBP7.43□□□□□ -1.22
PCF11-202ENST00000528336 DGCR2P98153 550 aa7.43□□□□□ -1.22
PCF11-202ENST00000528336 SNAPC2Q13487 334 aa7.43□□□□□ -1.22
PCF11-202ENST00000528336 GTF2H3Q13889 308 aa7.43□□□□□ -1.22
PCF11-202ENST00000528336 TOB2Q14106 344 aaPredicted RBP7.43□□□□□ -1.22
PCF11-202ENST00000528336 CCDC157Q569K6 752 aa7.43□□□□□ -1.22
PCF11-202ENST00000528336 RABL3Q5HYI8 236 aa7.43□□□□□ -1.22
PCF11-202ENST00000528336 ATAT1Q5SQI0 421 aa7.43□□□□□ -1.22
PCF11-202ENST00000528336 FAM102BQ5T8I3 360 aa7.43□□□□□ -1.22
PCF11-202ENST00000528336 THEMIS2Q5TEJ8 643 aa7.43□□□□□ -1.22
PCF11-202ENST00000528336 FMNL3Q8IVF7 1028 aa7.43□□□□□ -1.22
PCF11-202ENST00000528336 NMRK2Q9NPI5 230 aa7.43□□□□□ -1.22
PCF11-202ENST00000528336 MAN1C1Q9NR34 630 aa7.43□□□□□ -1.22
PCF11-202ENST00000528336 PARPBPQ9NWS1 579 aa7.43□□□□□ -1.22
PCF11-202ENST00000528336 TRPM5Q9NZQ8 1165 aa7.43□□□□□ -1.22
PCF11-202ENST00000528336 C1QTNF3-AMACRE9PGA6 284 aa7.42□□□□□ -1.22
PCF11-202ENST00000528336 MARCH6O60337 910 aa7.42□□□□□ -1.22
PCF11-202ENST00000528336 RECQL4O94761 1208 aa7.42□□□□□ -1.22
PCF11-202ENST00000528336 CD1AP06126 327 aa7.42□□□□□ -1.22
PCF11-202ENST00000528336 MYBP10242 640 aa7.42□□□□□ -1.22
PCF11-202ENST00000528336 MAP2K6P52564 334 aa7.42□□□□□ -1.22
PCF11-202ENST00000528336 EPM2AIP1Q7L775 607 aaPredicted RBP7.42□□□□□ -1.22
PCF11-202ENST00000528336 SH2D3CQ8N5H7 860 aa7.42□□□□□ -1.22
PCF11-202ENST00000528336 CAMKK1Q8N5S9 505 aa7.42□□□□□ -1.22
PCF11-202ENST00000528336 AIFM3Q96NN9 605 aa7.42□□□□□ -1.22
PCF11-202ENST00000528336 CEP72Q9P209 647 aa7.42□□□□□ -1.22
PCF11-202ENST00000528336 POLHQ9Y253 713 aa7.42□□□□□ -1.22
PCF11-202ENST00000528336 RIPOR2Q9Y4F9 1068 aa7.42□□□□□ -1.22
PCF11-202ENST00000528336 GRXCR1A8MXD5 290 aa7.41□□□□□ -1.22
PCF11-202ENST00000528336 ALDH2P05091 517 aa7.41□□□□□ -1.22
PCF11-202ENST00000528336 MTHFD1P11586 935 aaKnown RBP7.41□□□□□ -1.22
PCF11-202ENST00000528336 ALAS1P13196 640 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms