RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 I3L4J1 428 aa24.54■■□□□ 1.52
TRAPPC4-208ENST00000527680 UVSSAQ2YD98 709 aa24.54■■□□□ 1.52
TRAPPC4-208ENST00000527680 DTWD2Q8NBA8 298 aa24.54■■□□□ 1.52
TRAPPC4-208ENST00000527680 GPR152Q8TDT2 470 aa24.54■■□□□ 1.52
TRAPPC4-208ENST00000527680 DDX27Q96GQ7 796 aaKnown RBP24.54■■□□□ 1.52
TRAPPC4-208ENST00000527680 ACAP3Q96P50 834 aa24.54■■□□□ 1.52
TRAPPC4-208ENST00000527680 EIF4ENIF1Q9NRA8 985 aaKnown RBP24.54■■□□□ 1.52
TRAPPC4-208ENST00000527680 SLC38A7Q9NVC3 462 aa24.54■■□□□ 1.52
TRAPPC4-208ENST00000527680 CDH7Q9ULB5 785 aa24.54■■□□□ 1.52
TRAPPC4-208ENST00000527680 CDY1Q9Y6F8 540 aa24.54■■□□□ 1.52
TRAPPC4-208ENST00000527680 NUMBLQ9Y6R0 609 aa24.54■■□□□ 1.52
TRAPPC4-208ENST00000527680 ANHXE9PGG2 379 aa24.53■■□□□ 1.52
TRAPPC4-208ENST00000527680 SLC16A4O15374 487 aa24.53■■□□□ 1.52
TRAPPC4-208ENST00000527680 HARSP12081 509 aaKnown RBP24.53■■□□□ 1.52
TRAPPC4-208ENST00000527680 TKTP29401 623 aaKnown RBP24.53■■□□□ 1.52
TRAPPC4-208ENST00000527680 BRCC3P46736 316 aa24.53■■□□□ 1.52
TRAPPC4-208ENST00000527680 RAD51AP2Q09MP3 1159 aa24.53■■□□□ 1.52
TRAPPC4-208ENST00000527680 STRN3Q13033 797 aa24.53■■□□□ 1.52
TRAPPC4-208ENST00000527680 C8orf34Q49A92 452 aa24.53■■□□□ 1.52
TRAPPC4-208ENST00000527680 RILPL1Q5EBL4 403 aa24.53■■□□□ 1.52
TRAPPC4-208ENST00000527680 ANKS3Q6ZW76 656 aa24.53■■□□□ 1.52
TRAPPC4-208ENST00000527680 C1orf186Q6ZWK4 172 aa24.53■■□□□ 1.52
TRAPPC4-208ENST00000527680 CCDC105Q8IYK2 499 aa24.53■■□□□ 1.52
TRAPPC4-208ENST00000527680 DAW1Q8N136 415 aa24.53■■□□□ 1.52
TRAPPC4-208ENST00000527680 PLIN2Q99541 437 aa24.53■■□□□ 1.52
TRAPPC4-208ENST00000527680 C17orf75Q9HAS0 396 aa24.53■■□□□ 1.52
TRAPPC4-208ENST00000527680 MTRRQ9UBK8 725 aa24.53■■□□□ 1.52
TRAPPC4-208ENST00000527680 KCNG1Q9UIX4 513 aa24.53■■□□□ 1.52
TRAPPC4-208ENST00000527680 VWA8A3KMH1 1905 aa24.53■■□□□ 1.52
TRAPPC4-208ENST00000527680 PROB1E7EW31 1015 aa24.52■■□□□ 1.52
TRAPPC4-208ENST00000527680 H3BQV1 296 aa24.52■■□□□ 1.52
TRAPPC4-208ENST00000527680 HOXA9P31269 272 aa24.52■■□□□ 1.52
TRAPPC4-208ENST00000527680 NBL1P41271 181 aa24.52■■□□□ 1.52
TRAPPC4-208ENST00000527680 HTR4Q13639 388 aa24.52■■□□□ 1.52
TRAPPC4-208ENST00000527680 RABEP1Q15276 862 aa24.52■■□□□ 1.52
TRAPPC4-208ENST00000527680 KCNK18Q7Z418 384 aa24.52■■□□□ 1.52
TRAPPC4-208ENST00000527680 CDK5RAP3Q96JB5 506 aa24.52■■□□□ 1.52
TRAPPC4-208ENST00000527680 MMTAG2Q9BU76 263 aaKnown RBP24.52■■□□□ 1.52
TRAPPC4-208ENST00000527680 TBC1D17Q9HA65 648 aa24.52■■□□□ 1.52
TRAPPC4-208ENST00000527680 PTPRHQ9HD43 1115 aa24.52■■□□□ 1.52
TRAPPC4-208ENST00000527680 ARHGAP28Q9P2N2 729 aa24.52■■□□□ 1.52
TRAPPC4-208ENST00000527680 PTPRZ1P23471 2315 aaPredicted RBP24.51■■□□□ 1.51
TRAPPC4-208ENST00000527680 MCF2P10911 925 aa24.51■■□□□ 1.51
TRAPPC4-208ENST00000527680 ELF1P32519 619 aa24.51■■□□□ 1.51
TRAPPC4-208ENST00000527680 SMTNP53814 917 aa24.51■■□□□ 1.51
TRAPPC4-208ENST00000527680 ANGPT1Q15389 498 aa24.51■■□□□ 1.51
TRAPPC4-208ENST00000527680 PARM1Q6UWI2 310 aa24.51■■□□□ 1.51
TRAPPC4-208ENST00000527680 MPZL3Q6UWV2 235 aa24.51■■□□□ 1.51
TRAPPC4-208ENST00000527680 CD300LGQ6UXG3 332 aa24.51■■□□□ 1.51
TRAPPC4-208ENST00000527680 ALKAL1Q6UXT8 129 aa24.51■■□□□ 1.51
TRAPPC4-208ENST00000527680 RSPO2Q6UXX9 243 aaPredicted RBP24.51■■□□□ 1.51
TRAPPC4-208ENST00000527680 TAS1R3Q7RTX0 852 aa24.51■■□□□ 1.51
TRAPPC4-208ENST00000527680 FRMD5Q7Z6J6 570 aa24.51■■□□□ 1.51
TRAPPC4-208ENST00000527680 FGF13Q92913 245 aa24.51■■□□□ 1.51
TRAPPC4-208ENST00000527680 RPP25Q9BUL9 199 aaKnown RBP24.51■■□□□ 1.51
TRAPPC4-208ENST00000527680 TIPINQ9BVW5 301 aa24.51■■□□□ 1.51
TRAPPC4-208ENST00000527680 NUB1Q9Y5A7 615 aa24.51■■□□□ 1.51
TRAPPC4-208ENST00000527680 BACE2Q9Y5Z0 518 aa24.51■■□□□ 1.51
TRAPPC4-208ENST00000527680 PODXLO00592 558 aa24.5■■□□□ 1.51
TRAPPC4-208ENST00000527680 CENPBP07199 599 aaPredicted RBP24.5■■□□□ 1.51
TRAPPC4-208ENST00000527680 MATR3P43243 847 aaKnown RBP eCLIP24.5■■□□□ 1.51
TRAPPC4-208ENST00000527680 ARPP19P56211 112 aa24.5■■□□□ 1.51
TRAPPC4-208ENST00000527680 SOX4Q06945 474 aaPredicted RBP24.5■■□□□ 1.51
TRAPPC4-208ENST00000527680 SPECC1Q5M775 1068 aa24.5■■□□□ 1.51
TRAPPC4-208ENST00000527680 ASCL5Q7RTU5 278 aa24.5■■□□□ 1.51
TRAPPC4-208ENST00000527680 C3orf58Q8NDZ4 430 aa24.5■■□□□ 1.51
TRAPPC4-208ENST00000527680 ITFG1Q8TB96 612 aa24.5■■□□□ 1.51
TRAPPC4-208ENST00000527680 FGF14Q92915 247 aa24.5■■□□□ 1.51
TRAPPC4-208ENST00000527680 NKD2Q969F2 451 aaPredicted RBP24.5■■□□□ 1.51
TRAPPC4-208ENST00000527680 ZBTB45Q96K62 511 aaPredicted RBP24.5■■□□□ 1.51
TRAPPC4-208ENST00000527680 HCFC1R1Q9NWW0 138 aa24.5■■□□□ 1.51
TRAPPC4-208ENST00000527680 VWA3AA6NCI4 1184 aa24.49■■□□□ 1.51
TRAPPC4-208ENST00000527680 GUCY2CP25092 1073 aa24.49■■□□□ 1.51
TRAPPC4-208ENST00000527680 GPC5P78333 572 aa24.49■■□□□ 1.51
TRAPPC4-208ENST00000527680 ATP2C1P98194 919 aaPredicted RBP24.49■■□□□ 1.51
TRAPPC4-208ENST00000527680 MAPK7Q13164 816 aa24.49■■□□□ 1.51
TRAPPC4-208ENST00000527680 PABPC1LQ4VXU2 614 aaKnown RBP24.49■■□□□ 1.51
TRAPPC4-208ENST00000527680 XKR4Q5GH76 650 aa24.49■■□□□ 1.51
TRAPPC4-208ENST00000527680 MTSS1LQ765P7 747 aa24.49■■□□□ 1.51
TRAPPC4-208ENST00000527680 ZMAT2Q96NC0 199 aaKnown RBP24.49■■□□□ 1.51
TRAPPC4-208ENST00000527680 NTPCRQ9BSD7 190 aaKnown RBP24.49■■□□□ 1.51
TRAPPC4-208ENST00000527680 ARHGEF3Q9NR81 526 aa24.49■■□□□ 1.51
TRAPPC4-208ENST00000527680 SLC2A4RGQ9NR83 387 aa24.49■■□□□ 1.51
TRAPPC4-208ENST00000527680 ANKFY1Q9P2R3 1169 aa24.49■■□□□ 1.51
TRAPPC4-208ENST00000527680 DNMT3BQ9UBC3 853 aaKnown RBP24.49■■□□□ 1.51
TRAPPC4-208ENST00000527680 SIT1Q9Y3P8 196 aa24.49■■□□□ 1.51
TRAPPC4-208ENST00000527680 PRRG1O14668 218 aa24.48■■□□□ 1.51
TRAPPC4-208ENST00000527680 PLS3P13797 630 aa24.48■■□□□ 1.51
TRAPPC4-208ENST00000527680 RPL9P32969 192 aaKnown RBP24.48■■□□□ 1.51
TRAPPC4-208ENST00000527680 VARS2Q5ST30 1063 aaKnown RBP24.48■■□□□ 1.51
TRAPPC4-208ENST00000527680 RTL10Q7L3V2 364 aa24.48■■□□□ 1.51
TRAPPC4-208ENST00000527680 ZNF461Q8TAF7 563 aa24.48■■□□□ 1.51
TRAPPC4-208ENST00000527680 TMX3Q96JJ7 454 aa24.48■■□□□ 1.51
TRAPPC4-208ENST00000527680 SNX27Q96L92 541 aa24.48■■□□□ 1.51
TRAPPC4-208ENST00000527680 MRPS23Q9Y3D9 190 aaKnown RBP24.48■■□□□ 1.51
TRAPPC4-208ENST00000527680 USP34Q70CQ2 3546 aa24.48■■□□□ 1.51
TRAPPC4-208ENST00000527680 MYH11P35749 1972 aa24.47■■□□□ 1.51
TRAPPC4-208ENST00000527680 PRR23AA6NEV1 266 aa24.47■■□□□ 1.51
TRAPPC4-208ENST00000527680 LRG1P02750 347 aa24.47■■□□□ 1.51
TRAPPC4-208ENST00000527680 DCNP07585 359 aaKnown RBP24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms