RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 ACAP3Q96P50 834 aa11.43□□□□□ -0.58
PRPF40B-204ENST00000527253 CCSER1Q9C0I3 900 aa11.43□□□□□ -0.58
PRPF40B-204ENST00000527253 CNTN3Q9P232 1028 aa11.43□□□□□ -0.58
PRPF40B-204ENST00000527253 USTQ9Y2C2 406 aa11.43□□□□□ -0.58
PRPF40B-204ENST00000527253 ARIH1Q9Y4X5 557 aaPredicted RBP11.43□□□□□ -0.58
PRPF40B-204ENST00000527253 SPDYE4A6NLX3 237 aa11.42□□□□□ -0.58
PRPF40B-204ENST00000527253 K7ELQ4 463 aaPredicted RBP11.42□□□□□ -0.58
PRPF40B-204ENST00000527253 PDGFBP01127 241 aaPredicted RBP11.42□□□□□ -0.58
PRPF40B-204ENST00000527253 TKTP29401 623 aaKnown RBP11.42□□□□□ -0.58
PRPF40B-204ENST00000527253 SMTNP53814 917 aa11.42□□□□□ -0.58
PRPF40B-204ENST00000527253 YARSP54577 528 aaKnown RBP11.42□□□□□ -0.58
PRPF40B-204ENST00000527253 CEBPZQ03701 1054 aaKnown RBP11.42□□□□□ -0.58
PRPF40B-204ENST00000527253 MCL1Q07820 350 aa11.42□□□□□ -0.58
PRPF40B-204ENST00000527253 STRN3Q13033 797 aa11.42□□□□□ -0.58
PRPF40B-204ENST00000527253 PSMD5Q16401 504 aa11.42□□□□□ -0.58
PRPF40B-204ENST00000527253 ZBTB41Q5SVQ8 909 aa11.42□□□□□ -0.58
PRPF40B-204ENST00000527253 ZPBP2Q6X784 338 aa11.42□□□□□ -0.58
PRPF40B-204ENST00000527253 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.42□□□□□ -0.58
PRPF40B-204ENST00000527253 APBB1IPQ7Z5R6 666 aaPredicted RBP11.42□□□□□ -0.58
PRPF40B-204ENST00000527253 TDRD5Q8NAT2 981 aaKnown RBP11.42□□□□□ -0.58
PRPF40B-204ENST00000527253 PBXIP1Q96AQ6 731 aa11.42□□□□□ -0.58
PRPF40B-204ENST00000527253 UROC1Q96N76 676 aa11.42□□□□□ -0.58
PRPF40B-204ENST00000527253 USP28Q96RU2 1077 aa11.42□□□□□ -0.58
PRPF40B-204ENST00000527253 RHOBTB2Q9BYZ6 727 aa11.42□□□□□ -0.58
PRPF40B-204ENST00000527253 PLEKHA4Q9H4M7 779 aa11.42□□□□□ -0.58
PRPF40B-204ENST00000527253 WDR6Q9NNW5 1121 aaKnown RBP11.42□□□□□ -0.58
PRPF40B-204ENST00000527253 ANKFY1Q9P2R3 1169 aa11.42□□□□□ -0.58
PRPF40B-204ENST00000527253 DAXXQ9UER7 740 aaPredicted RBP11.42□□□□□ -0.58
PRPF40B-204ENST00000527253 FBXW11Q9UKB1 542 aa11.42□□□□□ -0.58
PRPF40B-204ENST00000527253 ODF2LQ9ULJ1 636 aa11.42□□□□□ -0.58
PRPF40B-204ENST00000527253 SRPRBQ9Y5M8 271 aaKnown RBP11.42□□□□□ -0.58
PRPF40B-204ENST00000527253 DOCK8Q8NF50 2099 aa11.41□□□□□ -0.58
PRPF40B-204ENST00000527253 PODXLO00592 558 aa11.41□□□□□ -0.58
PRPF40B-204ENST00000527253 FAM189A1O60320 539 aa11.41□□□□□ -0.58
PRPF40B-204ENST00000527253 ZMYND10O75800 440 aa11.41□□□□□ -0.58
PRPF40B-204ENST00000527253 NMT1P30419 496 aaKnown RBP11.41□□□□□ -0.58
PRPF40B-204ENST00000527253 DDIT3P35638 169 aa11.41□□□□□ -0.58
PRPF40B-204ENST00000527253 TNFSF9P41273 254 aa11.41□□□□□ -0.58
PRPF40B-204ENST00000527253 CREMQ03060 361 aa11.41□□□□□ -0.58
PRPF40B-204ENST00000527253 SPAG1Q07617 926 aa11.41□□□□□ -0.58
PRPF40B-204ENST00000527253 ELAVL2Q12926 359 aaKnown RBP11.41□□□□□ -0.58
PRPF40B-204ENST00000527253 NOLC1Q14978 699 aaKnown RBP eCLIP11.41□□□□□ -0.58
PRPF40B-204ENST00000527253 IER5LQ5T953 404 aa11.41□□□□□ -0.58
PRPF40B-204ENST00000527253 SLC39A4Q6P5W5 647 aa11.41□□□□□ -0.58
PRPF40B-204ENST00000527253 CCDC149Q6ZUS6 474 aa11.41□□□□□ -0.58
PRPF40B-204ENST00000527253 MYCT1Q8N699 235 aa11.41□□□□□ -0.58
PRPF40B-204ENST00000527253 SMG7Q92540 1137 aaKnown RBP11.41□□□□□ -0.58
PRPF40B-204ENST00000527253 LARP4BQ92615 738 aaKnown RBP11.41□□□□□ -0.58
PRPF40B-204ENST00000527253 FAM122AQ96E09 287 aa11.41□□□□□ -0.58
PRPF40B-204ENST00000527253 DDX27Q96GQ7 796 aaKnown RBP11.41□□□□□ -0.58
PRPF40B-204ENST00000527253 MFSD14AQ96MC6 490 aa11.41□□□□□ -0.58
PRPF40B-204ENST00000527253 MYADMQ96S97 322 aa11.41□□□□□ -0.58
PRPF40B-204ENST00000527253 PRKD2Q9BZL6 878 aa11.41□□□□□ -0.58
PRPF40B-204ENST00000527253 IKZF4Q9H2S9 585 aa11.41□□□□□ -0.58
PRPF40B-204ENST00000527253 TOPORSQ9NS56 1045 aaPredicted RBP11.41□□□□□ -0.58
PRPF40B-204ENST00000527253 ZDHHC7Q9NXF8 308 aa11.41□□□□□ -0.58
PRPF40B-204ENST00000527253 LARSQ9P2J5 1176 aaKnown RBP11.41□□□□□ -0.58
PRPF40B-204ENST00000527253 MTRRQ9UBK8 725 aa11.41□□□□□ -0.58
PRPF40B-204ENST00000527253 KCNG1Q9UIX4 513 aa11.41□□□□□ -0.58
PRPF40B-204ENST00000527253 TBX20Q9UMR3 447 aa11.41□□□□□ -0.58
PRPF40B-204ENST00000527253 SORCS3Q9UPU3 1222 aa11.41□□□□□ -0.58
PRPF40B-204ENST00000527253 CITO14578 2027 aa11.41□□□□□ -0.58
PRPF40B-204ENST00000527253 CLUHO75153 1309 aa11.4□□□□□ -0.58
PRPF40B-204ENST00000527253 PIEZO1Q92508 2521 aa11.4□□□□□ -0.58
PRPF40B-204ENST00000527253 A0A087X0B3 334 aa11.4□□□□□ -0.58
PRPF40B-204ENST00000527253 TISP43B9A030 160 aa11.4□□□□□ -0.58
PRPF40B-204ENST00000527253 K7ENM7 598 aa11.4□□□□□ -0.58
PRPF40B-204ENST00000527253 CLDN3O15551 220 aa11.4□□□□□ -0.58
PRPF40B-204ENST00000527253 STX6O43752 255 aa11.4□□□□□ -0.58
PRPF40B-204ENST00000527253 TRAK2O60296 914 aa11.4□□□□□ -0.58
PRPF40B-204ENST00000527253 TBC1D4O60343 1298 aa11.4□□□□□ -0.58
PRPF40B-204ENST00000527253 FAM13AO94988 1023 aa11.4□□□□□ -0.58
PRPF40B-204ENST00000527253 PIGRP01833 764 aa11.4□□□□□ -0.58
PRPF40B-204ENST00000527253 CXCL8P10145 99 aa11.4□□□□□ -0.58
PRPF40B-204ENST00000527253 OR1D2P34982 312 aa11.4□□□□□ -0.58
PRPF40B-204ENST00000527253 VCPP55072 806 aaKnown RBP11.4□□□□□ -0.58
PRPF40B-204ENST00000527253 NTHL1P78549 312 aa11.4□□□□□ -0.58
PRPF40B-204ENST00000527253 MTMR3Q13615 1198 aa11.4□□□□□ -0.58
PRPF40B-204ENST00000527253 RAB33AQ14088 237 aa11.4□□□□□ -0.58
PRPF40B-204ENST00000527253 SLC39A14Q15043 492 aa11.4□□□□□ -0.58
PRPF40B-204ENST00000527253 ZBTB6Q15916 424 aa11.4□□□□□ -0.58
PRPF40B-204ENST00000527253 ZC2HC1CQ53FD0 456 aaPredicted RBP11.4□□□□□ -0.58
PRPF40B-204ENST00000527253 CYP26C1Q6V0L0 522 aa11.4□□□□□ -0.58
PRPF40B-204ENST00000527253 OTOP3Q7RTS5 596 aa11.4□□□□□ -0.58
PRPF40B-204ENST00000527253 PLCD3Q8N3E9 789 aa11.4□□□□□ -0.58
PRPF40B-204ENST00000527253 FBXL6Q8N531 539 aa11.4□□□□□ -0.58
PRPF40B-204ENST00000527253 RSAD2Q8WXG1 361 aa11.4□□□□□ -0.58
PRPF40B-204ENST00000527253 SNX21Q969T3 373 aa11.4□□□□□ -0.58
PRPF40B-204ENST00000527253 PARVGQ9HBI0 331 aa11.4□□□□□ -0.58
PRPF40B-204ENST00000527253 SLC38A7Q9NVC3 462 aa11.4□□□□□ -0.58
PRPF40B-204ENST00000527253 TUBGCP4Q9UGJ1 667 aa11.4□□□□□ -0.58
PRPF40B-204ENST00000527253 DPP7Q9UHL4 492 aa11.4□□□□□ -0.58
PRPF40B-204ENST00000527253 BACE2Q9Y5Z0 518 aa11.4□□□□□ -0.58
PRPF40B-204ENST00000527253 CACNA1HO95180 2353 aa11.4□□□□□ -0.58
PRPF40B-204ENST00000527253 A0A0B4J269 797 aa11.39□□□□□ -0.59
PRPF40B-204ENST00000527253 TTC26A0AVF1 554 aa11.39□□□□□ -0.59
PRPF40B-204ENST00000527253 MYMKA6NI61 221 aa11.39□□□□□ -0.59
PRPF40B-204ENST00000527253 LACTBL1A8MY62 500 aa11.39□□□□□ -0.59
PRPF40B-204ENST00000527253 ANKRD63C9JTQ0 380 aa11.39□□□□□ -0.59
PRPF40B-204ENST00000527253 H0YCG3 227 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms