RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 FZD5Q13467 585 aa12.07□□□□□ -0.48
NEDD8-204ENST00000526430 LPAL2Q16609 132 aa12.07□□□□□ -0.48
NEDD8-204ENST00000526430 NOMO2Q5JPE7 1267 aa12.07□□□□□ -0.48
NEDD8-204ENST00000526430 PLA2G4FQ68DD2 849 aa12.07□□□□□ -0.48
NEDD8-204ENST00000526430 PARM1Q6UWI2 310 aa12.07□□□□□ -0.48
NEDD8-204ENST00000526430 KRI1Q8N9T8 703 aaKnown RBP12.07□□□□□ -0.48
NEDD8-204ENST00000526430 PIGOQ8TEQ8 1089 aa12.07□□□□□ -0.48
NEDD8-204ENST00000526430 AK8Q96MA6 479 aa12.07□□□□□ -0.48
NEDD8-204ENST00000526430 PLIN2Q99541 437 aa12.07□□□□□ -0.48
NEDD8-204ENST00000526430 PRKD2Q9BZL6 878 aa12.07□□□□□ -0.48
NEDD8-204ENST00000526430 PIDD1Q9HB75 910 aa12.07□□□□□ -0.48
NEDD8-204ENST00000526430 CHST12Q9NRB3 414 aa12.07□□□□□ -0.48
NEDD8-204ENST00000526430 BLOC1S4Q9NUP1 217 aa12.07□□□□□ -0.48
NEDD8-204ENST00000526430 DNAJB4Q9UDY4 337 aa12.07□□□□□ -0.48
NEDD8-204ENST00000526430 MRPS17Q9Y2R5 130 aaKnown RBP12.07□□□□□ -0.48
NEDD8-204ENST00000526430 EML5Q05BV3 1969 aa12.07□□□□□ -0.48
NEDD8-204ENST00000526430 LOC400499M0QZD8 3231 aa12.06□□□□□ -0.48
NEDD8-204ENST00000526430 DDX11L8A8MPP1 907 aa12.06□□□□□ -0.48
NEDD8-204ENST00000526430 E9PMD0 336 aa12.06□□□□□ -0.48
NEDD8-204ENST00000526430 MAGEB2O15479 319 aa12.06□□□□□ -0.48
NEDD8-204ENST00000526430 CUTAO60888 179 aa12.06□□□□□ -0.48
NEDD8-204ENST00000526430 SSBP05455 408 aaKnown RBP eCLIP12.06□□□□□ -0.48
NEDD8-204ENST00000526430 SKIP12755 728 aa12.06□□□□□ -0.48
NEDD8-204ENST00000526430 DARSP14868 501 aaKnown RBP12.06□□□□□ -0.48
NEDD8-204ENST00000526430 CD72P21854 359 aa12.06□□□□□ -0.48
NEDD8-204ENST00000526430 YWHABP31946 246 aaKnown RBP12.06□□□□□ -0.48
NEDD8-204ENST00000526430 CCT6AP40227 531 aaKnown RBP12.06□□□□□ -0.48
NEDD8-204ENST00000526430 RARRES1P49788 294 aa12.06□□□□□ -0.48
NEDD8-204ENST00000526430 RNASELQ05823 741 aaKnown RBP12.06□□□□□ -0.48
NEDD8-204ENST00000526430 ADCY1Q08828 1119 aa12.06□□□□□ -0.48
NEDD8-204ENST00000526430 DRP2Q13474 957 aa12.06□□□□□ -0.48
NEDD8-204ENST00000526430 METTL13Q8N6R0 699 aa12.06□□□□□ -0.48
NEDD8-204ENST00000526430 SNX29Q8TEQ0 813 aa12.06□□□□□ -0.48
NEDD8-204ENST00000526430 SPATA32Q96LK8 384 aa12.06□□□□□ -0.48
NEDD8-204ENST00000526430 MAP7D2Q96T17 732 aa12.06□□□□□ -0.48
NEDD8-204ENST00000526430 TMEM121BQ9BXQ6 578 aaPredicted RBP12.06□□□□□ -0.48
NEDD8-204ENST00000526430 CHRDQ9H2X0 955 aa12.06□□□□□ -0.48
NEDD8-204ENST00000526430 RXFP1Q9HBX9 757 aa12.06□□□□□ -0.48
NEDD8-204ENST00000526430 XPNPEP1Q9NQW7 623 aa12.06□□□□□ -0.48
NEDD8-204ENST00000526430 NRBP2Q9NSY0 501 aa12.06□□□□□ -0.48
NEDD8-204ENST00000526430 CDH7Q9ULB5 785 aa12.06□□□□□ -0.48
NEDD8-204ENST00000526430 KIAA1024Q9UPX6 916 aa12.06□□□□□ -0.48
NEDD8-204ENST00000526430 ATP6V1DQ9Y5K8 247 aa12.06□□□□□ -0.48
NEDD8-204ENST00000526430 ARID2Q68CP9 1835 aa12.06□□□□□ -0.48
NEDD8-204ENST00000526430 SMG1Q96Q15 3661 aaKnown RBP12.05□□□□□ -0.48
NEDD8-204ENST00000526430 FAM237AA0A1B0GTK4 181 aa12.05□□□□□ -0.48
NEDD8-204ENST00000526430 B4GALT3O60512 393 aa12.05□□□□□ -0.48
NEDD8-204ENST00000526430 MAFO75444 373 aaPredicted RBP12.05□□□□□ -0.48
NEDD8-204ENST00000526430 FSHRP23945 695 aa12.05□□□□□ -0.48
NEDD8-204ENST00000526430 CNR2P34972 360 aa12.05□□□□□ -0.48
NEDD8-204ENST00000526430 CLCN3P51790 818 aa12.05□□□□□ -0.48
NEDD8-204ENST00000526430 KARSQ15046 597 aaKnown RBP12.05□□□□□ -0.48
NEDD8-204ENST00000526430 E2F4Q16254 413 aa12.05□□□□□ -0.48
NEDD8-204ENST00000526430 RESP18Q5W5W9 173 aa12.05□□□□□ -0.48
NEDD8-204ENST00000526430 KRT79Q5XKE5 535 aa12.05□□□□□ -0.48
NEDD8-204ENST00000526430 ADALQ6DHV7 355 aa12.05□□□□□ -0.48
NEDD8-204ENST00000526430 ZNF852Q6ZMS4 543 aa12.05□□□□□ -0.48
NEDD8-204ENST00000526430 PRR23BQ6ZRT6 265 aa12.05□□□□□ -0.48
NEDD8-204ENST00000526430 TPRG1Q6ZUI0 275 aa12.05□□□□□ -0.48
NEDD8-204ENST00000526430 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.05□□□□□ -0.48
NEDD8-204ENST00000526430 RNF168Q8IYW5 571 aaPredicted RBP12.05□□□□□ -0.48
NEDD8-204ENST00000526430 TMEM175Q9BSA9 504 aa12.05□□□□□ -0.48
NEDD8-204ENST00000526430 HERC2P3Q9BVR0 1158 aa12.05□□□□□ -0.48
NEDD8-204ENST00000526430 PANK2Q9BZ23 570 aa12.05□□□□□ -0.48
NEDD8-204ENST00000526430 SCAND2PQ9GZW5 306 aaPredicted RBP12.05□□□□□ -0.48
NEDD8-204ENST00000526430 DHX33Q9H6R0 707 aaKnown RBP12.05□□□□□ -0.48
NEDD8-204ENST00000526430 ANKEF1Q9NU02 776 aa12.05□□□□□ -0.48
NEDD8-204ENST00000526430 DDX19AQ9NUU7 478 aaKnown RBP12.05□□□□□ -0.48
NEDD8-204ENST00000526430 AKT3Q9Y243 479 aa12.05□□□□□ -0.48
NEDD8-204ENST00000526430 HPSEQ9Y251 543 aa12.05□□□□□ -0.48
NEDD8-204ENST00000526430 NAV2Q8IVL1 2488 aa12.05□□□□□ -0.48
NEDD8-204ENST00000526430 NUP205Q92621 2012 aa12.04□□□□□ -0.48
NEDD8-204ENST00000526430 SRRM3A6NNA2 597 aaPredicted RBP12.04□□□□□ -0.48
NEDD8-204ENST00000526430 TAF4O00268 1085 aa12.04□□□□□ -0.48
NEDD8-204ENST00000526430 SLC26A4O43511 780 aa12.04□□□□□ -0.48
NEDD8-204ENST00000526430 ZNF623O75123 536 aa12.04□□□□□ -0.48
NEDD8-204ENST00000526430 GADD45BO75293 160 aaPredicted RBP12.04□□□□□ -0.48
NEDD8-204ENST00000526430 OFD1O75665 1012 aa12.04□□□□□ -0.48
NEDD8-204ENST00000526430 KCNK5O95279 499 aa12.04□□□□□ -0.48
NEDD8-204ENST00000526430 EFEMP2O95967 443 aa12.04□□□□□ -0.48
NEDD8-204ENST00000526430 CMA1P23946 247 aa12.04□□□□□ -0.48
NEDD8-204ENST00000526430 TMOD1P28289 359 aa12.04□□□□□ -0.48
NEDD8-204ENST00000526430 GLUD2P49448 558 aa12.04□□□□□ -0.48
NEDD8-204ENST00000526430 RAB27AP51159 221 aa12.04□□□□□ -0.48
NEDD8-204ENST00000526430 GPC3P51654 580 aa12.04□□□□□ -0.48
NEDD8-204ENST00000526430 CCR3P51677 355 aa12.04□□□□□ -0.48
NEDD8-204ENST00000526430 RING1Q06587 406 aa12.04□□□□□ -0.48
NEDD8-204ENST00000526430 SIM2Q14190 667 aaPredicted RBP12.04□□□□□ -0.48
NEDD8-204ENST00000526430 MTERF2Q49AM1 385 aa12.04□□□□□ -0.48
NEDD8-204ENST00000526430 ARSHQ5FYA8 562 aa12.04□□□□□ -0.48
NEDD8-204ENST00000526430 ZNF280BQ86YH2 543 aa12.04□□□□□ -0.48
NEDD8-204ENST00000526430 CKAP2LQ8IYA6 745 aa12.04□□□□□ -0.48
NEDD8-204ENST00000526430 ZNF687Q8N1G0 1237 aa12.04□□□□□ -0.48
NEDD8-204ENST00000526430 ERMNQ8TAM6 284 aa12.04□□□□□ -0.48
NEDD8-204ENST00000526430 FAM167AQ96KS9 214 aa12.04□□□□□ -0.48
NEDD8-204ENST00000526430 NACC1Q96RE7 527 aa12.04□□□□□ -0.48
NEDD8-204ENST00000526430 MTRQ99707 1265 aa12.04□□□□□ -0.48
NEDD8-204ENST00000526430 RAB34Q9BZG1 259 aa12.04□□□□□ -0.48
NEDD8-204ENST00000526430 TCEAL9Q9UHQ7 104 aa12.04□□□□□ -0.48
NEDD8-204ENST00000526430 LHX6Q9UPM6 363 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms