RNA–Protein interactions for RNA: ENST00000526271.2

CPSF1-201, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-201ENST00000526271 MCM7P33993 719 aa15.75■□□□□ 0.11
CPSF1-201ENST00000526271 CCR2P41597 374 aa15.75■□□□□ 0.11
CPSF1-201ENST00000526271 NCBP1Q09161 790 aaKnown RBP15.75■□□□□ 0.11
CPSF1-201ENST00000526271 PRPF4BQ13523 1007 aaKnown RBP15.75■□□□□ 0.11
CPSF1-201ENST00000526271 MLF2Q15773 248 aaPredicted RBP15.75■□□□□ 0.11
CPSF1-201ENST00000526271 UPP1Q16831 310 aa15.75■□□□□ 0.11
CPSF1-201ENST00000526271 SLC44A4Q53GD3 710 aa15.75■□□□□ 0.11
CPSF1-201ENST00000526271 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.75■□□□□ 0.11
CPSF1-201ENST00000526271 HACE1Q8IYU2 909 aa15.75■□□□□ 0.11
CPSF1-201ENST00000526271 DAW1Q8N136 415 aa15.75■□□□□ 0.11
CPSF1-201ENST00000526271 POLR3CQ9BUI4 534 aaPredicted RBP15.75■□□□□ 0.11
CPSF1-201ENST00000526271 SEMA4AQ9H3S1 761 aa15.75■□□□□ 0.11
CPSF1-201ENST00000526271 PTPRHQ9HD43 1115 aa15.75■□□□□ 0.11
CPSF1-201ENST00000526271 TUFT1Q9NNX1 390 aa15.75■□□□□ 0.11
CPSF1-201ENST00000526271 LTB4R2Q9NPC1 389 aa15.75■□□□□ 0.11
CPSF1-201ENST00000526271 DLL3Q9NYJ7 618 aa15.75■□□□□ 0.11
CPSF1-201ENST00000526271 CDY1Q9Y6F8 540 aa15.75■□□□□ 0.11
CPSF1-201ENST00000526271 ZFP37Q9Y6Q3 630 aaPredicted RBP15.75■□□□□ 0.11
CPSF1-201ENST00000526271 N4BP3O15049 544 aa15.74■□□□□ 0.11
CPSF1-201ENST00000526271 MOSPD3O75425 235 aa15.74■□□□□ 0.11
CPSF1-201ENST00000526271 CEBPBP17676 345 aa15.74■□□□□ 0.11
CPSF1-201ENST00000526271 TGM1P22735 817 aa15.74■□□□□ 0.11
CPSF1-201ENST00000526271 GUCY1B3Q02153 619 aa15.74■□□□□ 0.11
CPSF1-201ENST00000526271 CREMQ03060 361 aa15.74■□□□□ 0.11
CPSF1-201ENST00000526271 NBR1Q14596 966 aa15.74■□□□□ 0.11
CPSF1-201ENST00000526271 XKR4Q5GH76 650 aa15.74■□□□□ 0.11
CPSF1-201ENST00000526271 PRSS36Q5K4E3 855 aa15.74■□□□□ 0.11
CPSF1-201ENST00000526271 TANGO2Q6ICL3 276 aa15.74■□□□□ 0.11
CPSF1-201ENST00000526271 ELMSAN1Q6PJG2 1045 aa15.74■□□□□ 0.11
CPSF1-201ENST00000526271 TSSK4Q6SA08 328 aa15.74■□□□□ 0.11
CPSF1-201ENST00000526271 ALKAL1Q6UXT8 129 aa15.74■□□□□ 0.11
CPSF1-201ENST00000526271 MCPH1Q8NEM0 835 aa15.74■□□□□ 0.11
CPSF1-201ENST00000526271 KCNG4Q8TDN1 519 aa15.74■□□□□ 0.11
CPSF1-201ENST00000526271 TCEAL4Q96EI5 215 aa15.74■□□□□ 0.11
CPSF1-201ENST00000526271 POLIQ9UNA4 740 aa15.74■□□□□ 0.11
CPSF1-201ENST00000526271 CHD8Q9HCK8 2581 aa15.73■□□□□ 0.11
CPSF1-201ENST00000526271 WDR27A2RRH5 827 aa15.73■□□□□ 0.11
CPSF1-201ENST00000526271 SEC24AO95486 1093 aa15.73■□□□□ 0.11
CPSF1-201ENST00000526271 TDGF1P13385 188 aa15.73■□□□□ 0.11
CPSF1-201ENST00000526271 LIG1P18858 919 aa15.73■□□□□ 0.11
CPSF1-201ENST00000526271 RPA1P27694 616 aa15.73■□□□□ 0.11
CPSF1-201ENST00000526271 RBM25P49756 843 aaKnown RBP15.73■□□□□ 0.11
CPSF1-201ENST00000526271 ROR1Q01973 937 aa15.73■□□□□ 0.11
CPSF1-201ENST00000526271 MAPK7Q13164 816 aa15.73■□□□□ 0.11
CPSF1-201ENST00000526271 MAPK6Q16659 721 aa15.73■□□□□ 0.11
CPSF1-201ENST00000526271 LIN9Q5TKA1 542 aa15.73■□□□□ 0.11
CPSF1-201ENST00000526271 CLDN23Q96B33 292 aa15.73■□□□□ 0.11
CPSF1-201ENST00000526271 MCRS1Q96EZ8 462 aa15.73■□□□□ 0.11
CPSF1-201ENST00000526271 BACE2Q9Y5Z0 518 aa15.73■□□□□ 0.11
CPSF1-201ENST00000526271 ANK1P16157 1881 aa15.72■□□□□ 0.11
CPSF1-201ENST00000526271 SMIM28A0A1B0GU29 152 aa15.72■□□□□ 0.11
CPSF1-201ENST00000526271 FAM170BA6NMN3 283 aa15.72■□□□□ 0.11
CPSF1-201ENST00000526271 LILRB5O75023 590 aa15.72■□□□□ 0.11
CPSF1-201ENST00000526271 ABLIM3O94929 683 aa15.72■□□□□ 0.11
CPSF1-201ENST00000526271 VNN2O95498 520 aa15.72■□□□□ 0.11
CPSF1-201ENST00000526271 RHOP08100 348 aa15.72■□□□□ 0.11
CPSF1-201ENST00000526271 NAMPTP43490 491 aa15.72■□□□□ 0.11
CPSF1-201ENST00000526271 ANAPC15P60006 121 aa15.72■□□□□ 0.11
CPSF1-201ENST00000526271 ZNF174Q15697 407 aa15.72■□□□□ 0.11
CPSF1-201ENST00000526271 PABPC1LQ4VXU2 614 aaKnown RBP15.72■□□□□ 0.11
CPSF1-201ENST00000526271 WDR44Q5JSH3 913 aa15.72■□□□□ 0.11
CPSF1-201ENST00000526271 ZBTB8OSQ8IWT0 167 aa15.72■□□□□ 0.11
CPSF1-201ENST00000526271 ZBTB44Q8NCP5 570 aa15.72■□□□□ 0.11
CPSF1-201ENST00000526271 WASF1Q92558 559 aa15.72■□□□□ 0.11
CPSF1-201ENST00000526271 ZSWIM3Q96MP5 696 aa15.72■□□□□ 0.11
CPSF1-201ENST00000526271 NACC1Q96RE7 527 aa15.72■□□□□ 0.11
CPSF1-201ENST00000526271 CDT1Q9H211 546 aa15.72■□□□□ 0.11
CPSF1-201ENST00000526271 MAP1BP46821 2468 aaKnown RBP15.71■□□□□ 0.11
CPSF1-201ENST00000526271 ARHGEF37A1IGU5 675 aa15.71■□□□□ 0.11
CPSF1-201ENST00000526271 B3GAT3O94766 335 aa15.71■□□□□ 0.11
CPSF1-201ENST00000526271 SEC24BO95487 1268 aa15.71■□□□□ 0.11
CPSF1-201ENST00000526271 RFX1P22670 979 aa15.71■□□□□ 0.11
CPSF1-201ENST00000526271 HOXC13P31276 330 aa15.71■□□□□ 0.11
CPSF1-201ENST00000526271 PRKCQQ04759 706 aa15.71■□□□□ 0.11
CPSF1-201ENST00000526271 MRPL58Q14197 206 aaKnown RBP15.71■□□□□ 0.11
CPSF1-201ENST00000526271 UBXN2BQ14CS0 331 aa15.71■□□□□ 0.11
CPSF1-201ENST00000526271 IL17AQ16552 155 aa15.71■□□□□ 0.11
CPSF1-201ENST00000526271 UVSSAQ2YD98 709 aa15.71■□□□□ 0.11
CPSF1-201ENST00000526271 ATF7IP2Q5U623 682 aa15.71■□□□□ 0.11
CPSF1-201ENST00000526271 SLC8B1Q6J4K2 584 aa15.71■□□□□ 0.11
CPSF1-201ENST00000526271 MTSS1LQ765P7 747 aa15.71■□□□□ 0.11
CPSF1-201ENST00000526271 KCNK18Q7Z418 384 aa15.71■□□□□ 0.11
CPSF1-201ENST00000526271 RUBCNQ92622 972 aa15.71■□□□□ 0.11
CPSF1-201ENST00000526271 C2orf40Q9H1Z8 148 aa15.71■□□□□ 0.11
CPSF1-201ENST00000526271 AVENQ9NQS1 362 aaPredicted RBP15.71■□□□□ 0.11
CPSF1-201ENST00000526271 HEBP1Q9NRV9 189 aa15.71■□□□□ 0.11
CPSF1-201ENST00000526271 SPATA6Q9NWH7 488 aaPredicted RBP15.71■□□□□ 0.11
CPSF1-201ENST00000526271 KCNH3Q9ULD8 1083 aa15.71■□□□□ 0.11
CPSF1-201ENST00000526271 PP2D1A8MPX8 630 aa15.7■□□□□ 0.1
CPSF1-201ENST00000526271 ECI2O75521 394 aa15.7■□□□□ 0.1
CPSF1-201ENST00000526271 OR52Z1P0C646 297 aa15.7■□□□□ 0.1
CPSF1-201ENST00000526271 PROZP22891 400 aa15.7■□□□□ 0.1
CPSF1-201ENST00000526271 TOB1P50616 345 aaPredicted RBP15.7■□□□□ 0.1
CPSF1-201ENST00000526271 ELAVL2Q12926 359 aaKnown RBP15.7■□□□□ 0.1
CPSF1-201ENST00000526271 ZNF528Q3MIS6 628 aa15.7■□□□□ 0.1
CPSF1-201ENST00000526271 VARS2Q5ST30 1063 aaKnown RBP15.7■□□□□ 0.1
CPSF1-201ENST00000526271 TPRG1Q6ZUI0 275 aa15.7■□□□□ 0.1
CPSF1-201ENST00000526271 C18orf25Q96B23 403 aaPredicted RBP15.7■□□□□ 0.1
CPSF1-201ENST00000526271 RSPRY1Q96DX4 576 aa15.7■□□□□ 0.1
CPSF1-201ENST00000526271 ZBTB45Q96K62 511 aaPredicted RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms