RNA–Protein interactions for RNA: ENST00000525936.1

EXOSC4-202, Transcript of exosome component 4, humanhuman

TSL 3 BASIC

Gene EXOSC4, Length 606 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-202ENST00000525936 EFHBQ8N7U6 833 aa21.54■■□□□ 1.04
EXOSC4-202ENST00000525936 POMGNT1Q8WZA1 660 aa21.54■■□□□ 1.04
EXOSC4-202ENST00000525936 RABGGTAQ92696 567 aa21.54■■□□□ 1.04
EXOSC4-202ENST00000525936 PPP2R3CQ969Q6 453 aa21.54■■□□□ 1.04
EXOSC4-202ENST00000525936 UROC1Q96N76 676 aa21.54■■□□□ 1.04
EXOSC4-202ENST00000525936 GPR62Q9BZJ7 368 aa21.54■■□□□ 1.04
EXOSC4-202ENST00000525936 ENTPD7Q9NQZ7 604 aa21.54■■□□□ 1.04
EXOSC4-202ENST00000525936 LACTBL1A8MY62 500 aa21.53■■□□□ 1.04
EXOSC4-202ENST00000525936 TGFB1I1O43294 461 aa21.53■■□□□ 1.04
EXOSC4-202ENST00000525936 CXCL14O95715 111 aa21.53■■□□□ 1.04
EXOSC4-202ENST00000525936 PRR29P0C7W0 189 aa21.53■■□□□ 1.04
EXOSC4-202ENST00000525936 IGFBP6P24592 240 aaPredicted RBP21.53■■□□□ 1.04
EXOSC4-202ENST00000525936 ACOT2P49753 483 aa21.53■■□□□ 1.04
EXOSC4-202ENST00000525936 FAM160A1Q05DH4 1040 aa21.53■■□□□ 1.04
EXOSC4-202ENST00000525936 STK4Q13043 487 aa21.53■■□□□ 1.04
EXOSC4-202ENST00000525936 DUSP6Q16828 381 aa21.53■■□□□ 1.04
EXOSC4-202ENST00000525936 KMT5BQ4FZB7 885 aa21.53■■□□□ 1.04
EXOSC4-202ENST00000525936 KIAA0319Q5VV43 1072 aa21.53■■□□□ 1.04
EXOSC4-202ENST00000525936 KANK3Q6NY19 840 aa21.53■■□□□ 1.04
EXOSC4-202ENST00000525936 DCLRE1AQ6PJP8 1040 aa21.53■■□□□ 1.04
EXOSC4-202ENST00000525936 SYCP3Q8IZU3 236 aa21.53■■□□□ 1.04
EXOSC4-202ENST00000525936 ATXN2LQ8WWM7 1075 aaKnown RBP21.53■■□□□ 1.04
EXOSC4-202ENST00000525936 C18orf25Q96B23 403 aaPredicted RBP21.53■■□□□ 1.04
EXOSC4-202ENST00000525936 CDCA3Q99618 268 aaPredicted RBP21.53■■□□□ 1.04
EXOSC4-202ENST00000525936 TLE6Q9H808 572 aa21.53■■□□□ 1.04
EXOSC4-202ENST00000525936 UBE2ZQ9H832 354 aaPredicted RBP21.53■■□□□ 1.04
EXOSC4-202ENST00000525936 RPF1Q9H9Y2 349 aaKnown RBP21.53■■□□□ 1.04
EXOSC4-202ENST00000525936 SLC39A2Q9NP94 309 aa21.53■■□□□ 1.04
EXOSC4-202ENST00000525936 THEGQ9P2T0 379 aa21.53■■□□□ 1.04
EXOSC4-202ENST00000525936 UBE4BO95155 1302 aa21.53■■□□□ 1.04
EXOSC4-202ENST00000525936 TADA2AO75478 443 aa21.52■■□□□ 1.04
EXOSC4-202ENST00000525936 KIF4AO95239 1232 aa21.52■■□□□ 1.04
EXOSC4-202ENST00000525936 RPN1P04843 607 aaKnown RBP21.52■■□□□ 1.04
EXOSC4-202ENST00000525936 NRIP1P48552 1158 aa21.52■■□□□ 1.04
EXOSC4-202ENST00000525936 CLCNKBP51801 687 aa21.52■■□□□ 1.04
EXOSC4-202ENST00000525936 PTPN14Q15678 1187 aa21.52■■□□□ 1.04
EXOSC4-202ENST00000525936 FUT10Q6P4F1 479 aa21.52■■□□□ 1.04
EXOSC4-202ENST00000525936 RBM23Q86U06 439 aaKnown RBP21.52■■□□□ 1.04
EXOSC4-202ENST00000525936 CD302Q8IX05 232 aa21.52■■□□□ 1.04
EXOSC4-202ENST00000525936 GPR65Q8IYL9 337 aa21.52■■□□□ 1.04
EXOSC4-202ENST00000525936 KIAA0895Q8NCT3 520 aa21.52■■□□□ 1.04
EXOSC4-202ENST00000525936 DDX27Q96GQ7 796 aaKnown RBP21.52■■□□□ 1.04
EXOSC4-202ENST00000525936 TIGD1Q96MW7 591 aa21.52■■□□□ 1.04
EXOSC4-202ENST00000525936 CBWD1Q9BRT8 395 aa21.52■■□□□ 1.04
EXOSC4-202ENST00000525936 HERC2P3Q9BVR0 1158 aa21.52■■□□□ 1.04
EXOSC4-202ENST00000525936 GOLGA2P5Q9HBQ8 144 aa21.52■■□□□ 1.04
EXOSC4-202ENST00000525936 PDCD11Q14690 1871 aaKnown RBP21.52■■□□□ 1.03
EXOSC4-202ENST00000525936 PER2O15055 1255 aa21.51■■□□□ 1.03
EXOSC4-202ENST00000525936 GADD45BO75293 160 aaPredicted RBP21.51■■□□□ 1.03
EXOSC4-202ENST00000525936 RHOBTB3O94955 611 aa21.51■■□□□ 1.03
EXOSC4-202ENST00000525936 CYP3A5P20815 502 aa21.51■■□□□ 1.03
EXOSC4-202ENST00000525936 RPL9P32969 192 aaKnown RBP21.51■■□□□ 1.03
EXOSC4-202ENST00000525936 SNRPFP62306 86 aaKnown RBP21.51■■□□□ 1.03
EXOSC4-202ENST00000525936 TFF2Q03403 129 aa21.51■■□□□ 1.03
EXOSC4-202ENST00000525936 BMS1Q14692 1282 aaKnown RBP21.51■■□□□ 1.03
EXOSC4-202ENST00000525936 TMEM184AQ6ZMB5 413 aa21.51■■□□□ 1.03
EXOSC4-202ENST00000525936 CLEC17AQ6ZS10 378 aa21.51■■□□□ 1.03
EXOSC4-202ENST00000525936 ZSWIM2Q8NEG5 633 aa21.51■■□□□ 1.03
EXOSC4-202ENST00000525936 AUTS2Q8WXX7 1259 aa21.51■■□□□ 1.03
EXOSC4-202ENST00000525936 IGFLR1Q9H665 355 aa21.51■■□□□ 1.03
EXOSC4-202ENST00000525936 ASB7Q9H672 318 aa21.51■■□□□ 1.03
EXOSC4-202ENST00000525936 TSHZ2Q9NRE2 1034 aa21.51■■□□□ 1.03
EXOSC4-202ENST00000525936 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.51■■□□□ 1.03
EXOSC4-202ENST00000525936 FSD2A1L4K1 749 aa21.5■■□□□ 1.03
EXOSC4-202ENST00000525936 KIAA0391O15091 583 aaKnown RBP21.5■■□□□ 1.03
EXOSC4-202ENST00000525936 LINC01565O15544 149 aa21.5■■□□□ 1.03
EXOSC4-202ENST00000525936 GLP2RO95838 553 aa21.5■■□□□ 1.03
EXOSC4-202ENST00000525936 DSG1Q02413 1049 aa21.5■■□□□ 1.03
EXOSC4-202ENST00000525936 PPP2R3AQ06190 1150 aa21.5■■□□□ 1.03
EXOSC4-202ENST00000525936 ELOA2Q8IYF1 753 aaPredicted RBP21.5■■□□□ 1.03
EXOSC4-202ENST00000525936 C3orf58Q8NDZ4 430 aa21.5■■□□□ 1.03
EXOSC4-202ENST00000525936 VN1R2Q8NFZ6 395 aa21.5■■□□□ 1.03
EXOSC4-202ENST00000525936 IPO9Q96P70 1041 aaKnown RBP21.5■■□□□ 1.03
EXOSC4-202ENST00000525936 EXOC1Q9NV70 894 aa21.5■■□□□ 1.03
EXOSC4-202ENST00000525936 DERAQ9Y315 318 aa21.5■■□□□ 1.03
EXOSC4-202ENST00000525936 SF3B1O75533 1304 aaKnown RBP eCLIP21.5■■□□□ 1.031e-7■■■■■ 72.4
EXOSC4-202ENST00000525936 EXTL3O43909 919 aa21.49■■□□□ 1.03
EXOSC4-202ENST00000525936 CLASP2O75122 1294 aaKnown RBP21.49■■□□□ 1.03
EXOSC4-202ENST00000525936 B3GAT3O94766 335 aa21.49■■□□□ 1.03
EXOSC4-202ENST00000525936 LDHAP00338 332 aaKnown RBP21.49■■□□□ 1.03
EXOSC4-202ENST00000525936 LRPAP1P30533 357 aa21.49■■□□□ 1.03
EXOSC4-202ENST00000525936 MRPS5P82675 430 aaKnown RBP21.49■■□□□ 1.03
EXOSC4-202ENST00000525936 SPAG1Q07617 926 aa21.49■■□□□ 1.03
EXOSC4-202ENST00000525936 DLX2Q07687 328 aaPredicted RBP21.49■■□□□ 1.03
EXOSC4-202ENST00000525936 KCNB1Q14721 858 aa21.49■■□□□ 1.03
EXOSC4-202ENST00000525936 KNOP1Q1ED39 458 aaKnown RBP21.49■■□□□ 1.03
EXOSC4-202ENST00000525936 USP41Q3LFD5 358 aa21.49■■□□□ 1.03
EXOSC4-202ENST00000525936 SPATA20Q8TB22 786 aa21.49■■□□□ 1.03
EXOSC4-202ENST00000525936 TMEM174Q8WUU8 243 aa21.49■■□□□ 1.03
EXOSC4-202ENST00000525936 KIF12Q96FN5 646 aa21.49■■□□□ 1.03
EXOSC4-202ENST00000525936 FBXL18Q96ME1 805 aa21.49■■□□□ 1.03
EXOSC4-202ENST00000525936 ASB2Q96Q27 587 aa21.49■■□□□ 1.03
EXOSC4-202ENST00000525936 RXFP1Q9HBX9 757 aa21.49■■□□□ 1.03
EXOSC4-202ENST00000525936 AGPAT3Q9NRZ7 376 aa21.49■■□□□ 1.03
EXOSC4-202ENST00000525936 CLDND1Q9NY35 253 aa21.49■■□□□ 1.03
EXOSC4-202ENST00000525936 CLEC1BQ9P126 229 aa21.49■■□□□ 1.03
EXOSC4-202ENST00000525936 TUBGCP4Q9UGJ1 667 aa21.49■■□□□ 1.03
EXOSC4-202ENST00000525936 C2CD2Q9Y426 696 aa21.49■■□□□ 1.03
EXOSC4-202ENST00000525936 ANK1P16157 1881 aa21.48■■□□□ 1.03
EXOSC4-202ENST00000525936 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms