RNA–Protein interactions for RNA: ENST00000525670.5

SVIP-202, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-202ENST00000525670 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.15□□□□□ -1.42
SVIP-202ENST00000525670 CROTQ9UKG9 612 aa6.15□□□□□ -1.42
SVIP-202ENST00000525670 WASF3Q9UPY6 502 aa6.15□□□□□ -1.42
SVIP-202ENST00000525670 PPP2R3BQ9Y5P8 575 aa6.15□□□□□ -1.42
SVIP-202ENST00000525670 ATRNL1Q5VV63 1379 aa6.15□□□□□ -1.43
SVIP-202ENST00000525670 RPAP1Q9BWH6 1393 aaPredicted RBP6.15□□□□□ -1.43
SVIP-202ENST00000525670 A0A0D9SFI3 127 aa6.14□□□□□ -1.43
SVIP-202ENST00000525670 C1QTNF3-AMACRE9PGA6 284 aa6.14□□□□□ -1.43
SVIP-202ENST00000525670 KLF4O43474 513 aa6.14□□□□□ -1.43
SVIP-202ENST00000525670 LAMTOR5O43504 91 aa6.14□□□□□ -1.43
SVIP-202ENST00000525670 GLRX3O76003 335 aaKnown RBP6.14□□□□□ -1.43
SVIP-202ENST00000525670 APPP05067 770 aa6.14□□□□□ -1.43
SVIP-202ENST00000525670 FGFR1P11362 822 aa6.14□□□□□ -1.43
SVIP-202ENST00000525670 GSPT1P15170 499 aaKnown RBP6.14□□□□□ -1.43
SVIP-202ENST00000525670 ECE1P42892 770 aa6.14□□□□□ -1.43
SVIP-202ENST00000525670 RRP1BQ14684 758 aaKnown RBP6.14□□□□□ -1.43
SVIP-202ENST00000525670 FAM83AQ86UY5 434 aa6.14□□□□□ -1.43
SVIP-202ENST00000525670 KBTBD3Q8NAB2 608 aa6.14□□□□□ -1.43
SVIP-202ENST00000525670 CHST13Q8NET6 341 aa6.14□□□□□ -1.43
SVIP-202ENST00000525670 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.14□□□□□ -1.43
SVIP-202ENST00000525670 DCAF4Q8WV16 495 aa6.14□□□□□ -1.43
SVIP-202ENST00000525670 OSBP2Q969R2 916 aa6.14□□□□□ -1.43
SVIP-202ENST00000525670 DYNLL2Q96FJ2 89 aa6.14□□□□□ -1.43
SVIP-202ENST00000525670 CCDC136Q96JN2 1154 aa6.14□□□□□ -1.43
SVIP-202ENST00000525670 FAM227BQ96M60 508 aa6.14□□□□□ -1.43
SVIP-202ENST00000525670 C8orf49Q96NF6 230 aa6.14□□□□□ -1.43
SVIP-202ENST00000525670 RIOK1Q9BRS2 568 aaKnown RBP6.14□□□□□ -1.43
SVIP-202ENST00000525670 ZNF341Q9BYN7 854 aa6.14□□□□□ -1.43
SVIP-202ENST00000525670 KRTAP3-1Q9BYR8 98 aa6.14□□□□□ -1.43
SVIP-202ENST00000525670 CRNKL1Q9BZJ0 848 aaKnown RBP6.14□□□□□ -1.43
SVIP-202ENST00000525670 TMPRSS5Q9H3S3 457 aa6.14□□□□□ -1.43
SVIP-202ENST00000525670 DNAJC18Q9H819 358 aa6.14□□□□□ -1.43
SVIP-202ENST00000525670 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.14□□□□□ -1.43
SVIP-202ENST00000525670 MCM9Q9NXL9 1143 aa6.14□□□□□ -1.43
SVIP-202ENST00000525670 SLC4A4Q9Y6R1 1079 aa6.14□□□□□ -1.43
SVIP-202ENST00000525670 CASP8AP2Q9UKL3 1982 aa6.14□□□□□ -1.43
SVIP-202ENST00000525670 TTC41PQ6P2S7 1318 aa6.14□□□□□ -1.43
SVIP-202ENST00000525670 PHIPQ8WWQ0 1821 aa6.13□□□□□ -1.43
SVIP-202ENST00000525670 PTPRFP10586 1907 aa6.13□□□□□ -1.43
SVIP-202ENST00000525670 CCL15-CCL14A0A0B4J2E2 113 aa6.13□□□□□ -1.43
SVIP-202ENST00000525670 TRIM75PA6NK02 468 aa6.13□□□□□ -1.43
SVIP-202ENST00000525670 MPHOSPH10O00566 681 aaKnown RBP6.13□□□□□ -1.43
SVIP-202ENST00000525670 SLC27A2O14975 620 aa6.13□□□□□ -1.43
SVIP-202ENST00000525670 RNF113AO15541 343 aaKnown RBP6.13□□□□□ -1.43
SVIP-202ENST00000525670 GPAA1O43292 621 aa6.13□□□□□ -1.43
SVIP-202ENST00000525670 ENTPD3O75355 529 aa6.13□□□□□ -1.43
SVIP-202ENST00000525670 HLA-DOAP06340 250 aa6.13□□□□□ -1.43
SVIP-202ENST00000525670 TDO2P48775 406 aa6.13□□□□□ -1.43
SVIP-202ENST00000525670 LBX1P52954 281 aa6.13□□□□□ -1.43
SVIP-202ENST00000525670 NOGQ13253 232 aa6.13□□□□□ -1.43
SVIP-202ENST00000525670 CCL15Q16663 113 aa6.13□□□□□ -1.43
SVIP-202ENST00000525670 PKN3Q6P5Z2 889 aa6.13□□□□□ -1.43
SVIP-202ENST00000525670 TMC5Q6UXY8 1006 aa6.13□□□□□ -1.43
SVIP-202ENST00000525670 LBX2Q6XYB7 198 aa6.13□□□□□ -1.43
SVIP-202ENST00000525670 GADL1Q6ZQY3 521 aa6.13□□□□□ -1.43
SVIP-202ENST00000525670 OTOP3Q7RTS5 596 aa6.13□□□□□ -1.43
SVIP-202ENST00000525670 LIMS2Q7Z4I7 341 aa6.13□□□□□ -1.43
SVIP-202ENST00000525670 ZNF589Q86UQ0 364 aaPredicted RBP6.13□□□□□ -1.43
SVIP-202ENST00000525670 ANKRD13AQ8IZ07 590 aa6.13□□□□□ -1.43
SVIP-202ENST00000525670 CLEC4DQ8WXI8 215 aa6.13□□□□□ -1.43
SVIP-202ENST00000525670 ZCCHC14Q8WYQ9 949 aaKnown RBP6.13□□□□□ -1.43
SVIP-202ENST00000525670 ZFYVE21Q9BQ24 234 aa6.13□□□□□ -1.43
SVIP-202ENST00000525670 AARSD1Q9BTE6 412 aaKnown RBP6.13□□□□□ -1.43
SVIP-202ENST00000525670 IDI2Q9BXS1 227 aa6.13□□□□□ -1.43
SVIP-202ENST00000525670 PPP4R1LQ9P1A2 415 aa6.13□□□□□ -1.43
SVIP-202ENST00000525670 PPARGC1AQ9UBK2 798 aaKnown RBP6.13□□□□□ -1.43
SVIP-202ENST00000525670 FTSJ1Q9UET6 329 aa6.13□□□□□ -1.43
SVIP-202ENST00000525670 NUB1Q9Y5A7 615 aa6.13□□□□□ -1.43
SVIP-202ENST00000525670 PRODHO43272 600 aa6.12□□□□□ -1.43
SVIP-202ENST00000525670 PRDM1O75626 825 aa6.12□□□□□ -1.43
SVIP-202ENST00000525670 PABPC1P11940 636 aaKnown RBP6.12□□□□□ -1.43
SVIP-202ENST00000525670 ZNF20P17024 532 aa6.12□□□□□ -1.43
SVIP-202ENST00000525670 MMP14P50281 582 aa6.12□□□□□ -1.43
SVIP-202ENST00000525670 PLCD1P51178 756 aa6.12□□□□□ -1.43
SVIP-202ENST00000525670 FKBP1BP68106 108 aa6.12□□□□□ -1.43
SVIP-202ENST00000525670 KIZQ2M2Z5 673 aa6.12□□□□□ -1.43
SVIP-202ENST00000525670 VPS53Q5VIR6 699 aa6.12□□□□□ -1.43
SVIP-202ENST00000525670 ZSCAN25Q6NSZ9 544 aa6.12□□□□□ -1.43
SVIP-202ENST00000525670 TRMT10BQ6PF06 316 aaKnown RBP6.12□□□□□ -1.43
SVIP-202ENST00000525670 CWC27Q6UX04 472 aaKnown RBP6.12□□□□□ -1.43
SVIP-202ENST00000525670 PROSER1Q86XN7 944 aa6.12□□□□□ -1.43
SVIP-202ENST00000525670 KLHL36Q8N4N3 616 aa6.12□□□□□ -1.43
SVIP-202ENST00000525670 ST13P5Q8NFI4 369 aaPredicted RBP6.12□□□□□ -1.43
SVIP-202ENST00000525670 APPBP2Q92624 585 aa6.12□□□□□ -1.43
SVIP-202ENST00000525670 R3HDMLQ9H3Y0 253 aa6.12□□□□□ -1.43
SVIP-202ENST00000525670 ARHGEF4Q9NR80 690 aa6.12□□□□□ -1.43
SVIP-202ENST00000525670 CENPFP49454 3210 aa6.11□□□□□ -1.43
SVIP-202ENST00000525670 COL2A1P02458 1487 aaPredicted RBP6.11□□□□□ -1.43
SVIP-202ENST00000525670 NPEPPSL1A6NEC2 478 aa6.11□□□□□ -1.43
SVIP-202ENST00000525670 GH2P01242 217 aa6.11□□□□□ -1.43
SVIP-202ENST00000525670 HSPA8P11142 646 aaKnown RBP6.11□□□□□ -1.43
SVIP-202ENST00000525670 HAND2P61296 217 aa6.11□□□□□ -1.43
SVIP-202ENST00000525670 PPP2CBP62714 309 aa6.11□□□□□ -1.43
SVIP-202ENST00000525670 PPP2CAP67775 309 aa6.11□□□□□ -1.43
SVIP-202ENST00000525670 GRIN1Q05586 938 aa6.11□□□□□ -1.43
SVIP-202ENST00000525670 SPIRE1Q08AE8 756 aa6.11□□□□□ -1.43
SVIP-202ENST00000525670 NFATC3Q12968 1075 aa6.11□□□□□ -1.43
SVIP-202ENST00000525670 UBE3CQ15386 1083 aa6.11□□□□□ -1.43
SVIP-202ENST00000525670 TTC22Q5TAA0 569 aa6.11□□□□□ -1.43
SVIP-202ENST00000525670 FKBP1CQ5VVH2 108 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms