RNA–Protein interactions for RNA: ENST00000525435.1

CCS-202, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-202ENST00000525435 ENPEPQ07075 957 aa13.44□□□□□ -0.26
CCS-202ENST00000525435 SNRNP35Q16560 246 aaKnown RBP13.44□□□□□ -0.26
CCS-202ENST00000525435 CT47A1Q5JQC4 288 aaPredicted RBP13.44□□□□□ -0.26
CCS-202ENST00000525435 Q7L0L9 218 aa13.44□□□□□ -0.26
CCS-202ENST00000525435 DDX53Q86TM3 631 aaKnown RBP13.44□□□□□ -0.26
CCS-202ENST00000525435 GPR65Q8IYL9 337 aa13.44□□□□□ -0.26
CCS-202ENST00000525435 MLKLQ8NB16 471 aa13.44□□□□□ -0.26
CCS-202ENST00000525435 CACTINQ8WUQ7 758 aaKnown RBP13.44□□□□□ -0.26
CCS-202ENST00000525435 SAAL1Q96ER3 474 aa13.44□□□□□ -0.26
CCS-202ENST00000525435 TMEM169Q96HH4 297 aa13.44□□□□□ -0.26
CCS-202ENST00000525435 GAS2L1Q99501 681 aaPredicted RBP13.44□□□□□ -0.26
CCS-202ENST00000525435 PRDM12Q9H4Q4 367 aa13.44□□□□□ -0.26
CCS-202ENST00000525435 RBAKQ9NYW8 714 aaPredicted RBP13.44□□□□□ -0.26
CCS-202ENST00000525435 DNAJB4Q9UDY4 337 aa13.44□□□□□ -0.26
CCS-202ENST00000525435 MTUS1Q9ULD2 1270 aa13.44□□□□□ -0.26
CCS-202ENST00000525435 MAPK8IP1Q9UQF2 711 aa13.44□□□□□ -0.26
CCS-202ENST00000525435 EPOPA6NHQ4 379 aa13.43□□□□□ -0.26
CCS-202ENST00000525435 PPP1R3GB7ZBB8 358 aa13.43□□□□□ -0.26
CCS-202ENST00000525435 CLIC2O15247 247 aa13.43□□□□□ -0.26
CCS-202ENST00000525435 EXOC3O60645 756 aa13.43□□□□□ -0.26
CCS-202ENST00000525435 BMP6P22004 513 aa13.43□□□□□ -0.26
CCS-202ENST00000525435 LRPAP1P30533 357 aa13.43□□□□□ -0.26
CCS-202ENST00000525435 OR1G1P47890 313 aa13.43□□□□□ -0.26
CCS-202ENST00000525435 MCCD1P59942 119 aaPredicted RBP13.43□□□□□ -0.26
CCS-202ENST00000525435 ELAVL2Q12926 359 aaKnown RBP13.43□□□□□ -0.26
CCS-202ENST00000525435 UPP1Q16831 310 aa13.43□□□□□ -0.26
CCS-202ENST00000525435 FNDC1Q4ZHG4 1894 aaPredicted RBP13.43□□□□□ -0.26
CCS-202ENST00000525435 ZCWPW2Q504Y3 356 aa13.43□□□□□ -0.26
CCS-202ENST00000525435 SPATA1Q5VX52 437 aa13.43□□□□□ -0.26
CCS-202ENST00000525435 RBM43Q6ZSC3 357 aaKnown RBP13.43□□□□□ -0.26
CCS-202ENST00000525435 SPRED2Q7Z698 418 aa13.43□□□□□ -0.26
CCS-202ENST00000525435 SMYD4Q8IYR2 804 aaPredicted RBP13.43□□□□□ -0.26
CCS-202ENST00000525435 BEST2Q8NFU1 509 aa13.43□□□□□ -0.26
CCS-202ENST00000525435 MRPL38Q96DV4 380 aaKnown RBP13.43□□□□□ -0.26
CCS-202ENST00000525435 KIF12Q96FN5 646 aa13.43□□□□□ -0.26
CCS-202ENST00000525435 MFSD14AQ96MC6 490 aa13.43□□□□□ -0.26
CCS-202ENST00000525435 GUCD1Q96NT3 240 aa13.43□□□□□ -0.26
CCS-202ENST00000525435 TSG101Q99816 390 aa13.43□□□□□ -0.26
CCS-202ENST00000525435 CXCL16Q9H2A7 254 aa13.43□□□□□ -0.26
CCS-202ENST00000525435 NGRNQ9NPE2 291 aaKnown RBP13.43□□□□□ -0.26
CCS-202ENST00000525435 HCSTQ9UBK5 93 aa13.43□□□□□ -0.26
CCS-202ENST00000525435 FRMD4BQ9Y2L6 1034 aa13.43□□□□□ -0.26
CCS-202ENST00000525435 BICDL2A1A5D9 508 aa13.42□□□□□ -0.26
CCS-202ENST00000525435 GOLGA8IPA6NC78 632 aa13.42□□□□□ -0.26
CCS-202ENST00000525435 GOLGA8JA6NMD2 632 aa13.42□□□□□ -0.26
CCS-202ENST00000525435 GRM6O15303 877 aa13.42□□□□□ -0.26
CCS-202ENST00000525435 TRAPPC3O43617 180 aa13.42□□□□□ -0.26
CCS-202ENST00000525435 B4GALT3O60512 393 aa13.42□□□□□ -0.26
CCS-202ENST00000525435 EFEMP2O95967 443 aa13.42□□□□□ -0.26
CCS-202ENST00000525435 CCNE1P24864 410 aa13.42□□□□□ -0.26
CCS-202ENST00000525435 CYP2J2P51589 502 aa13.42□□□□□ -0.26
CCS-202ENST00000525435 FKBP3Q00688 224 aaKnown RBP13.42□□□□□ -0.26
CCS-202ENST00000525435 ADAM9Q13443 819 aa13.42□□□□□ -0.26
CCS-202ENST00000525435 TMEM132DQ14C87 1099 aa13.42□□□□□ -0.26
CCS-202ENST00000525435 PSMD6Q15008 389 aa13.42□□□□□ -0.26
CCS-202ENST00000525435 GLRA4Q5JXX5 417 aa13.42□□□□□ -0.26
CCS-202ENST00000525435 USP37Q86T82 979 aa13.42□□□□□ -0.26
CCS-202ENST00000525435 CBWD2Q8IUF1 395 aa13.42□□□□□ -0.26
CCS-202ENST00000525435 POF1BQ8WVV4 589 aa13.42□□□□□ -0.26
CCS-202ENST00000525435 SYAP1Q96A49 352 aaPredicted RBP13.42□□□□□ -0.26
CCS-202ENST00000525435 FAM212AQ96EL1 285 aa13.42□□□□□ -0.26
CCS-202ENST00000525435 FAM161BQ96MY7 647 aa13.42□□□□□ -0.26
CCS-202ENST00000525435 MKNK1Q9BUB5 465 aa13.42□□□□□ -0.26
CCS-202ENST00000525435 ALG13Q9NP73 1137 aaKnown RBP13.42□□□□□ -0.26
CCS-202ENST00000525435 SSX2IPQ9Y2D8 614 aa13.42□□□□□ -0.26
CCS-202ENST00000525435 CHD7Q9P2D1 2997 aa13.41□□□□□ -0.26
CCS-202ENST00000525435 NT5C1B-RDH14C9J2C7 533 aa13.41□□□□□ -0.26
CCS-202ENST00000525435 RFXAPO00287 272 aa13.41□□□□□ -0.26
CCS-202ENST00000525435 BIN1O00499 593 aa13.41□□□□□ -0.26
CCS-202ENST00000525435 IKBKBO14920 756 aa13.41□□□□□ -0.26
CCS-202ENST00000525435 CETN3O15182 167 aa13.41□□□□□ -0.26
CCS-202ENST00000525435 TADA2AO75478 443 aa13.41□□□□□ -0.26
CCS-202ENST00000525435 B3GAT3O94766 335 aa13.41□□□□□ -0.26
CCS-202ENST00000525435 NR2F2P24468 414 aa13.41□□□□□ -0.26
CCS-202ENST00000525435 PBX3P40426 434 aa13.41□□□□□ -0.26
CCS-202ENST00000525435 AP3M2P53677 418 aa13.41□□□□□ -0.26
CCS-202ENST00000525435 CLDN10P78369 228 aa13.41□□□□□ -0.26
CCS-202ENST00000525435 SOX4Q06945 474 aaPredicted RBP13.41□□□□□ -0.26
CCS-202ENST00000525435 CYP24A1Q07973 514 aa13.41□□□□□ -0.26
CCS-202ENST00000525435 CAMK1Q14012 370 aa13.41□□□□□ -0.26
CCS-202ENST00000525435 ADGRE1Q14246 886 aa13.41□□□□□ -0.26
CCS-202ENST00000525435 DUOXA2Q1HG44 320 aa13.41□□□□□ -0.26
CCS-202ENST00000525435 SKOR2Q2VWA4 1001 aaPredicted RBP13.41□□□□□ -0.26
CCS-202ENST00000525435 CCDC183Q5T5S1 534 aa13.41□□□□□ -0.26
CCS-202ENST00000525435 ISM2Q6H9L7 571 aa13.41□□□□□ -0.26
CCS-202ENST00000525435 JADE1Q6IE81 842 aa13.41□□□□□ -0.26
CCS-202ENST00000525435 ZC3H3Q8IXZ2 948 aaKnown RBP13.41□□□□□ -0.26
CCS-202ENST00000525435 ZSWIM2Q8NEG5 633 aa13.41□□□□□ -0.26
CCS-202ENST00000525435 TMC2Q8TDI7 906 aa13.41□□□□□ -0.26
CCS-202ENST00000525435 FNBP1Q96RU3 617 aa13.41□□□□□ -0.26
CCS-202ENST00000525435 TLR9Q9NR96 1032 aa13.41□□□□□ -0.26
CCS-202ENST00000525435 MARCH5Q9NX47 278 aa13.41□□□□□ -0.26
CCS-202ENST00000525435 ADAM28Q9UKQ2 775 aa13.41□□□□□ -0.26
CCS-202ENST00000525435 PRG3Q9Y2Y8 225 aaPredicted RBP13.41□□□□□ -0.26
CCS-202ENST00000525435 IRAK3Q9Y616 596 aa13.41□□□□□ -0.26
CCS-202ENST00000525435 MTCH2Q9Y6C9 303 aa13.41□□□□□ -0.26
CCS-202ENST00000525435 COL6A3P12111 3177 aa13.4□□□□□ -0.26
CCS-202ENST00000525435 ANO9A1A5B4 782 aa13.4□□□□□ -0.26
CCS-202ENST00000525435 CASTOR2A6NHX0 329 aa13.4□□□□□ -0.26
CCS-202ENST00000525435 PODXLO00592 558 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms