RNA–Protein interactions for RNA: ENST00000525334.5

TSPAN4-215, Transcript of tetraspanin 4, humanhuman

TSL 3

Gene TSPAN4, Length 860 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-215ENST00000525334 SLC38A7Q9NVC3 462 aa20.2■□□□□ 0.82
TSPAN4-215ENST00000525334 DZANK1Q9NVP4 752 aa20.2■□□□□ 0.82
TSPAN4-215ENST00000525334 TBC1D7Q9P0N9 293 aa20.2■□□□□ 0.82
TSPAN4-215ENST00000525334 RCOR1Q9UKL0 485 aa20.2■□□□□ 0.82
TSPAN4-215ENST00000525334 FRMD3A2A2Y4 597 aa20.19■□□□□ 0.82
TSPAN4-215ENST00000525334 FAM189A1O60320 539 aa20.19■□□□□ 0.82
TSPAN4-215ENST00000525334 PPP1R37O75864 691 aa20.19■□□□□ 0.82
TSPAN4-215ENST00000525334 B3GAT3O94766 335 aa20.19■□□□□ 0.82
TSPAN4-215ENST00000525334 ADH1AP07327 375 aa20.19■□□□□ 0.82
TSPAN4-215ENST00000525334 TNFSF9P41273 254 aa20.19■□□□□ 0.82
TSPAN4-215ENST00000525334 BECN1Q14457 450 aa20.19■□□□□ 0.82
TSPAN4-215ENST00000525334 UPP1Q16831 310 aa20.19■□□□□ 0.82
TSPAN4-215ENST00000525334 RTP2Q5QGT7 225 aa20.19■□□□□ 0.82
TSPAN4-215ENST00000525334 ZBTB41Q5SVQ8 909 aa20.19■□□□□ 0.82
TSPAN4-215ENST00000525334 DCLRE1AQ6PJP8 1040 aa20.19■□□□□ 0.82
TSPAN4-215ENST00000525334 GPR65Q8IYL9 337 aa20.19■□□□□ 0.82
TSPAN4-215ENST00000525334 IQUBQ8NA54 791 aa20.19■□□□□ 0.82
TSPAN4-215ENST00000525334 HVCN1Q96D96 273 aa20.19■□□□□ 0.82
TSPAN4-215ENST00000525334 POP1Q99575 1024 aaKnown RBP20.19■□□□□ 0.82
TSPAN4-215ENST00000525334 STRA6Q9BX79 667 aa20.19■□□□□ 0.82
TSPAN4-215ENST00000525334 OLFML3Q9NRN5 406 aa20.19■□□□□ 0.82
TSPAN4-215ENST00000525334 KBTBD4Q9NVX7 518 aa20.19■□□□□ 0.82
TSPAN4-215ENST00000525334 CDH22Q9UJ99 828 aa20.19■□□□□ 0.82
TSPAN4-215ENST00000525334 PDCD11Q14690 1871 aaKnown RBP20.19■□□□□ 0.82
TSPAN4-215ENST00000525334 A0A0B4J269 797 aa20.18■□□□□ 0.82
TSPAN4-215ENST00000525334 TISP43B9A030 160 aa20.18■□□□□ 0.82
TSPAN4-215ENST00000525334 ANKRD63C9JTQ0 380 aa20.18■□□□□ 0.82
TSPAN4-215ENST00000525334 OGTO15294 1046 aa20.18■□□□□ 0.82
TSPAN4-215ENST00000525334 ELAVL2Q12926 359 aaKnown RBP20.18■□□□□ 0.82
TSPAN4-215ENST00000525334 CBX2Q14781 532 aaPredicted RBP20.18■□□□□ 0.82
TSPAN4-215ENST00000525334 KYAT1Q16773 422 aa20.18■□□□□ 0.82
TSPAN4-215ENST00000525334 HERC4Q5GLZ8 1057 aaPredicted RBP20.18■□□□□ 0.82
TSPAN4-215ENST00000525334 FAM171A1Q5VUB5 890 aa20.18■□□□□ 0.82
TSPAN4-215ENST00000525334 RESP18Q5W5W9 173 aa20.18■□□□□ 0.82
TSPAN4-215ENST00000525334 PRSS55Q6UWB4 352 aaPredicted RBP20.18■□□□□ 0.82
TSPAN4-215ENST00000525334 CD300LGQ6UXG3 332 aa20.18■□□□□ 0.82
TSPAN4-215ENST00000525334 C12orf76Q8N812 135 aaPredicted RBP20.18■□□□□ 0.82
TSPAN4-215ENST00000525334 C3orf58Q8NDZ4 430 aa20.18■□□□□ 0.82
TSPAN4-215ENST00000525334 C18orf25Q96B23 403 aaPredicted RBP20.18■□□□□ 0.82
TSPAN4-215ENST00000525334 FBXL18Q96ME1 805 aa20.18■□□□□ 0.82
TSPAN4-215ENST00000525334 TTPALQ9BTX7 342 aa20.18■□□□□ 0.82
TSPAN4-215ENST00000525334 MSTO1Q9BUK6 570 aa20.18■□□□□ 0.82
TSPAN4-215ENST00000525334 IKZF4Q9H2S9 585 aa20.18■□□□□ 0.82
TSPAN4-215ENST00000525334 ADAM7Q9H2U9 754 aa20.18■□□□□ 0.82
TSPAN4-215ENST00000525334 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.18■□□□□ 0.82
TSPAN4-215ENST00000525334 PANK4Q9NVE7 773 aa20.18■□□□□ 0.82
TSPAN4-215ENST00000525334 FAM13BQ9NYF5 915 aa20.18■□□□□ 0.82
TSPAN4-215ENST00000525334 PLXNA3P51805 1871 aa20.18■□□□□ 0.82
TSPAN4-215ENST00000525334 PODXLO00592 558 aa20.17■□□□□ 0.82
TSPAN4-215ENST00000525334 POLR2DO15514 142 aaKnown RBP20.17■□□□□ 0.82
TSPAN4-215ENST00000525334 GCNT3O95395 438 aa20.17■□□□□ 0.82
TSPAN4-215ENST00000525334 CASP5P51878 434 aa20.17■□□□□ 0.82
TSPAN4-215ENST00000525334 ITIH3Q06033 890 aa20.17■□□□□ 0.82
TSPAN4-215ENST00000525334 RARS2Q5T160 578 aaKnown RBP20.17■□□□□ 0.82
TSPAN4-215ENST00000525334 KANK3Q6NY19 840 aa20.17■□□□□ 0.82
TSPAN4-215ENST00000525334 CEP57Q86XR8 500 aa20.17■□□□□ 0.82
TSPAN4-215ENST00000525334 DDX27Q96GQ7 796 aaKnown RBP20.17■□□□□ 0.82
TSPAN4-215ENST00000525334 PHF7Q9BWX1 381 aaPredicted RBP20.17■□□□□ 0.82
TSPAN4-215ENST00000525334 FGFBP2Q9BYJ0 223 aa20.17■□□□□ 0.82
TSPAN4-215ENST00000525334 TRIM9Q9C026 710 aa20.17■□□□□ 0.82
TSPAN4-215ENST00000525334 LRRC27Q9C0I9 530 aa20.17■□□□□ 0.82
TSPAN4-215ENST00000525334 PLEKHA5Q9HAU0 1116 aa20.17■□□□□ 0.82
TSPAN4-215ENST00000525334 FNIP2Q9P278 1114 aa20.17■□□□□ 0.82
TSPAN4-215ENST00000525334 VWA8A3KMH1 1905 aa20.16■□□□□ 0.82
TSPAN4-215ENST00000525334 TTC26A0AVF1 554 aa20.16■□□□□ 0.82
TSPAN4-215ENST00000525334 MYBP10242 640 aa20.16■□□□□ 0.82
TSPAN4-215ENST00000525334 RPL17P18621 184 aaKnown RBP20.16■□□□□ 0.82
TSPAN4-215ENST00000525334 KRT85P78386 507 aa20.16■□□□□ 0.82
TSPAN4-215ENST00000525334 CREMQ03060 361 aa20.16■□□□□ 0.82
TSPAN4-215ENST00000525334 PPP2R3AQ06190 1150 aa20.16■□□□□ 0.82
TSPAN4-215ENST00000525334 SPAG1Q07617 926 aa20.16■□□□□ 0.82
TSPAN4-215ENST00000525334 KCNA1Q09470 495 aa20.16■□□□□ 0.82
TSPAN4-215ENST00000525334 ENOX2Q16206 610 aaKnown RBP20.16■□□□□ 0.82
TSPAN4-215ENST00000525334 L1TD1Q5T7N2 865 aaKnown RBP20.16■□□□□ 0.82
TSPAN4-215ENST00000525334 CES5AQ6NT32 575 aa20.16■□□□□ 0.82
TSPAN4-215ENST00000525334 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.16■□□□□ 0.82
TSPAN4-215ENST00000525334 GLYCTKQ8IVS8 523 aa20.16■□□□□ 0.82
TSPAN4-215ENST00000525334 CCDC65Q8IXS2 484 aa20.16■□□□□ 0.82
TSPAN4-215ENST00000525334 LEO1Q8WVC0 666 aaPredicted RBP20.16■□□□□ 0.82
TSPAN4-215ENST00000525334 PIK3R5Q8WYR1 880 aa20.16■□□□□ 0.82
TSPAN4-215ENST00000525334 RPF1Q9H9Y2 349 aaKnown RBP20.16■□□□□ 0.82
TSPAN4-215ENST00000525334 TUBGCP4Q9UGJ1 667 aa20.16■□□□□ 0.82
TSPAN4-215ENST00000525334 STYXL1Q9Y6J8 313 aa20.16■□□□□ 0.82
TSPAN4-215ENST00000525334 SPDYE4A6NLX3 237 aa20.15■□□□□ 0.82
TSPAN4-215ENST00000525334 LACTBL1A8MY62 500 aa20.15■□□□□ 0.82
TSPAN4-215ENST00000525334 I3L4J1 428 aa20.15■□□□□ 0.82
TSPAN4-215ENST00000525334 GLUD1P00367 558 aa20.15■□□□□ 0.82
TSPAN4-215ENST00000525334 WEE2P0C1S8 567 aa20.15■□□□□ 0.82
TSPAN4-215ENST00000525334 ALADP13716 330 aa20.15■□□□□ 0.82
TSPAN4-215ENST00000525334 FGFR3P22607 806 aa20.15■□□□□ 0.82
TSPAN4-215ENST00000525334 BRCC3P46736 316 aa20.15■□□□□ 0.82
TSPAN4-215ENST00000525334 AMPD3Q01432 767 aa20.15■□□□□ 0.82
TSPAN4-215ENST00000525334 ADALQ6DHV7 355 aa20.15■□□□□ 0.82
TSPAN4-215ENST00000525334 SLFN12LQ6IEE8 588 aa20.15■□□□□ 0.82
TSPAN4-215ENST00000525334 LNX1Q8TBB1 728 aaPredicted RBP20.15■□□□□ 0.82
TSPAN4-215ENST00000525334 FEZF2Q8TBJ5 459 aa20.15■□□□□ 0.82
TSPAN4-215ENST00000525334 KIF12Q96FN5 646 aa20.15■□□□□ 0.82
TSPAN4-215ENST00000525334 SPATA32Q96LK8 384 aa20.15■□□□□ 0.82
TSPAN4-215ENST00000525334 ACCSQ96QU6 501 aa20.15■□□□□ 0.82
TSPAN4-215ENST00000525334 SFXN1Q9H9B4 322 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms