RNA–Protein interactions for RNA: ENST00000524534.5

PTPRK-217, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 2,441 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-217ENST00000524534 PWWP2AQ96N64 755 aa12.27□□□□□ -0.45
PTPRK-217ENST00000524534 TRIM6Q9C030 488 aaPredicted RBP12.27□□□□□ -0.45
PTPRK-217ENST00000524534 ANAPC7Q9UJX3 599 aa12.27□□□□□ -0.45
PTPRK-217ENST00000524534 LOXHD1Q8IVV2 1947 aa12.26□□□□□ -0.45
PTPRK-217ENST00000524534 P4HBP07237 508 aaKnown RBP12.26□□□□□ -0.45
PTPRK-217ENST00000524534 ADCY8P40145 1251 aa12.26□□□□□ -0.45
PTPRK-217ENST00000524534 LACTBP83111 547 aaPredicted RBP12.26□□□□□ -0.45
PTPRK-217ENST00000524534 KRT39Q6A163 491 aa12.26□□□□□ -0.45
PTPRK-217ENST00000524534 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.26□□□□□ -0.45
PTPRK-217ENST00000524534 HAUS6Q7Z4H7 955 aa12.26□□□□□ -0.45
PTPRK-217ENST00000524534 SRRM1Q8IYB3 904 aaKnown RBP12.26□□□□□ -0.45
PTPRK-217ENST00000524534 MAML1Q92585 1016 aa12.26□□□□□ -0.45
PTPRK-217ENST00000524534 KIFAP3Q92845 792 aa12.26□□□□□ -0.45
PTPRK-217ENST00000524534 DDX27Q96GQ7 796 aaKnown RBP12.26□□□□□ -0.45
PTPRK-217ENST00000524534 MXRA8Q9BRK3 442 aa12.26□□□□□ -0.45
PTPRK-217ENST00000524534 R3HDM2Q9Y2K5 976 aaKnown RBP12.26□□□□□ -0.45
PTPRK-217ENST00000524534 CCDC189A1A4V9 331 aa12.26□□□□□ -0.45
PTPRK-217ENST00000524534 MAGEB2O15479 319 aa12.26□□□□□ -0.45
PTPRK-217ENST00000524534 SLC1A1P43005 524 aa12.26□□□□□ -0.45
PTPRK-217ENST00000524534 RARRES1P49788 294 aa12.26□□□□□ -0.45
PTPRK-217ENST00000524534 ATP11AP98196 1134 aa12.26□□□□□ -0.45
PTPRK-217ENST00000524534 KLF1Q13351 362 aaPredicted RBP12.26□□□□□ -0.45
PTPRK-217ENST00000524534 TNIP1Q15025 636 aa12.26□□□□□ -0.45
PTPRK-217ENST00000524534 CCDC174Q6PII3 467 aa12.26□□□□□ -0.45
PTPRK-217ENST00000524534 SEPT14Q6ZU15 432 aa12.26□□□□□ -0.45
PTPRK-217ENST00000524534 MIER3Q7Z3K6 550 aa12.26□□□□□ -0.45
PTPRK-217ENST00000524534 RIBC1Q8N443 379 aaPredicted RBP12.26□□□□□ -0.45
PTPRK-217ENST00000524534 UTP4Q969X6 686 aaKnown RBP12.26□□□□□ -0.45
PTPRK-217ENST00000524534 RANBP17Q9H2T7 1088 aaKnown RBP12.26□□□□□ -0.45
PTPRK-217ENST00000524534 TMEM8AQ9HCN3 771 aa12.26□□□□□ -0.45
PTPRK-217ENST00000524534 AVENQ9NQS1 362 aaPredicted RBP12.26□□□□□ -0.45
PTPRK-217ENST00000524534 TBK1Q9UHD2 729 aa12.26□□□□□ -0.45
PTPRK-217ENST00000524534 MRPL11Q9Y3B7 192 aaKnown RBP12.26□□□□□ -0.45
PTPRK-217ENST00000524534 NRXN2Q9P2S2 1712 aa12.25□□□□□ -0.45
PTPRK-217ENST00000524534 ATRNL1Q5VV63 1379 aa12.25□□□□□ -0.45
PTPRK-217ENST00000524534 GOLGA8IPA6NC78 632 aa12.25□□□□□ -0.45
PTPRK-217ENST00000524534 GOLGA8JA6NMD2 632 aa12.25□□□□□ -0.45
PTPRK-217ENST00000524534 G3V3G9 751 aa12.25□□□□□ -0.45
PTPRK-217ENST00000524534 DDX39AO00148 427 aaKnown RBP12.25□□□□□ -0.45
PTPRK-217ENST00000524534 ABHD2P08910 425 aa12.25□□□□□ -0.45
PTPRK-217ENST00000524534 ATP2A2P16615 1042 aaKnown RBP12.25□□□□□ -0.45
PTPRK-217ENST00000524534 RBM5P52756 815 aaKnown RBP eCLIP12.25□□□□□ -0.45
PTPRK-217ENST00000524534 WDR4P57081 412 aaKnown RBP12.25□□□□□ -0.45
PTPRK-217ENST00000524534 IL9RQ01113 521 aa12.25□□□□□ -0.45
PTPRK-217ENST00000524534 PTP4A2Q12974 167 aa12.25□□□□□ -0.45
PTPRK-217ENST00000524534 SNRNP35Q16560 246 aaKnown RBP12.25□□□□□ -0.45
PTPRK-217ENST00000524534 DCAF8Q5TAQ9 597 aa12.25□□□□□ -0.45
PTPRK-217ENST00000524534 PODNQ7Z5L7 613 aa12.25□□□□□ -0.45
PTPRK-217ENST00000524534 CBWD2Q8IUF1 395 aa12.25□□□□□ -0.45
PTPRK-217ENST00000524534 ANKRD35Q8N283 1001 aa12.25□□□□□ -0.45
PTPRK-217ENST00000524534 BBOF1Q8ND07 529 aa12.25□□□□□ -0.45
PTPRK-217ENST00000524534 PARD3BQ8TEW8 1205 aa12.25□□□□□ -0.45
PTPRK-217ENST00000524534 NT5C1BQ96P26 610 aa12.25□□□□□ -0.45
PTPRK-217ENST00000524534 RAB3IPQ96QF0 476 aaPredicted RBP12.25□□□□□ -0.45
PTPRK-217ENST00000524534 CCDC77Q9BR77 488 aa12.25□□□□□ -0.45
PTPRK-217ENST00000524534 PITPNM3Q9BZ71 974 aa12.25□□□□□ -0.45
PTPRK-217ENST00000524534 TXLNGQ9NUQ3 528 aa12.25□□□□□ -0.45
PTPRK-217ENST00000524534 STARD13Q9Y3M8 1113 aa12.25□□□□□ -0.45
PTPRK-217ENST00000524534 ZHX2Q9Y6X8 837 aa12.25□□□□□ -0.45
PTPRK-217ENST00000524534 UBR3Q6ZT12 1888 aa12.25□□□□□ -0.45
PTPRK-217ENST00000524534 MROH7Q68CQ1 1323 aa12.25□□□□□ -0.45
PTPRK-217ENST00000524534 KDM4FA0A1W2PPD8 638 aa12.25□□□□□ -0.45
PTPRK-217ENST00000524534 FAM47DPA6NHR8 397 aa12.25□□□□□ -0.45
PTPRK-217ENST00000524534 UNGP13051 313 aaPredicted RBP12.25□□□□□ -0.45
PTPRK-217ENST00000524534 RRM1P23921 792 aa12.25□□□□□ -0.45
PTPRK-217ENST00000524534 ADSSP30520 456 aa12.25□□□□□ -0.45
PTPRK-217ENST00000524534 ECE1P42892 770 aa12.25□□□□□ -0.45
PTPRK-217ENST00000524534 NCKAP1LP55160 1127 aa12.25□□□□□ -0.45
PTPRK-217ENST00000524534 FKBP1AP62942 108 aaKnown RBP12.25□□□□□ -0.45
PTPRK-217ENST00000524534 PARP6Q2NL67 630 aa12.25□□□□□ -0.45
PTPRK-217ENST00000524534 MCOLN2Q8IZK6 566 aa12.25□□□□□ -0.45
PTPRK-217ENST00000524534 FBF1Q8TES7 1133 aa12.25□□□□□ -0.45
PTPRK-217ENST00000524534 DHX38Q92620 1227 aaKnown RBP12.25□□□□□ -0.45
PTPRK-217ENST00000524534 FAM81BQ96LP2 452 aa12.25□□□□□ -0.45
PTPRK-217ENST00000524534 IWS1Q96ST2 819 aa12.25□□□□□ -0.45
PTPRK-217ENST00000524534 MYLK2Q9H1R3 596 aa12.25□□□□□ -0.45
PTPRK-217ENST00000524534 ETNK1Q9HBU6 452 aa12.25□□□□□ -0.45
PTPRK-217ENST00000524534 RASA4BC9J798 803 aa12.24□□□□□ -0.45
PTPRK-217ENST00000524534 DHX15O43143 795 aaKnown RBP12.24□□□□□ -0.45
PTPRK-217ENST00000524534 RASA4O43374 803 aa12.24□□□□□ -0.45
PTPRK-217ENST00000524534 ATP5HO75947 161 aa12.24□□□□□ -0.45
PTPRK-217ENST00000524534 ASMTLO95671 621 aa12.24□□□□□ -0.45
PTPRK-217ENST00000524534 ITGB5P18084 799 aa12.24□□□□□ -0.45
PTPRK-217ENST00000524534 YARSP54577 528 aaKnown RBP12.24□□□□□ -0.45
PTPRK-217ENST00000524534 CCNG2Q16589 344 aa12.24□□□□□ -0.45
PTPRK-217ENST00000524534 ANKRD20A2Q5SQ80 823 aa12.24□□□□□ -0.45
PTPRK-217ENST00000524534 ANKRD20A1Q5TYW2 823 aa12.24□□□□□ -0.45
PTPRK-217ENST00000524534 ANKRD20A3Q5VUR7 823 aa12.24□□□□□ -0.45
PTPRK-217ENST00000524534 CCDC89Q8N998 374 aa12.24□□□□□ -0.45
PTPRK-217ENST00000524534 FBXL13Q8NEE6 735 aa12.24□□□□□ -0.45
PTPRK-217ENST00000524534 TAS1R2Q8TE23 839 aa12.24□□□□□ -0.45
PTPRK-217ENST00000524534 DENND1AQ8TEH3 1009 aa12.24□□□□□ -0.45
PTPRK-217ENST00000524534 NGLY1Q96IV0 654 aa12.24□□□□□ -0.45
PTPRK-217ENST00000524534 C9orf72Q96LT7 481 aa12.24□□□□□ -0.45
PTPRK-217ENST00000524534 C8orf37Q96NL8 207 aa12.24□□□□□ -0.45
PTPRK-217ENST00000524534 LRMDAQ9H2I8 198 aa12.24□□□□□ -0.45
PTPRK-217ENST00000524534 DBNDD1Q9H9R9 158 aa12.24□□□□□ -0.45
PTPRK-217ENST00000524534 RAB20Q9NX57 234 aa12.24□□□□□ -0.45
PTPRK-217ENST00000524534 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.24□□□□□ -0.45
PTPRK-217ENST00000524534 LIN7AO14910 233 aaPredicted RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms