RNA–Protein interactions for RNA: ENST00000524291.1

VDAC3-212, Transcript of voltage dependent anion channel 3, humanhuman

TSL 2

Gene VDAC3, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDAC3-212ENST00000524291 GTF2F1P35269 517 aaKnown RBP eCLIP4.9□□□□□ -1.63
VDAC3-212ENST00000524291 CCT4P50991 539 aaKnown RBP4.9□□□□□ -1.63
VDAC3-212ENST00000524291 SOX10P56693 466 aa4.9□□□□□ -1.63
VDAC3-212ENST00000524291 SSBP2P81877 361 aaPredicted RBP4.9□□□□□ -1.63
VDAC3-212ENST00000524291 TRIM25Q14258 630 aaKnown RBP4.9□□□□□ -1.63
VDAC3-212ENST00000524291 LLGL1Q15334 1064 aa4.9□□□□□ -1.63
VDAC3-212ENST00000524291 KAZNQ674X7 775 aa4.9□□□□□ -1.63
VDAC3-212ENST00000524291 ZNF626Q68DY1 528 aa4.9□□□□□ -1.63
VDAC3-212ENST00000524291 ZNF572Q7Z3I7 529 aaPredicted RBP4.9□□□□□ -1.63
VDAC3-212ENST00000524291 AMIGO2Q86SJ2 522 aa4.9□□□□□ -1.63
VDAC3-212ENST00000524291 LYSMD2Q8IV50 215 aa4.9□□□□□ -1.63
VDAC3-212ENST00000524291 NXPE1Q8N323 547 aa4.9□□□□□ -1.63
VDAC3-212ENST00000524291 ZNF610Q8N9Z0 462 aa4.9□□□□□ -1.63
VDAC3-212ENST00000524291 RPL36ALQ969Q0 106 aaKnown RBP4.9□□□□□ -1.63
VDAC3-212ENST00000524291 ORAI3Q9BRQ5 295 aa4.9□□□□□ -1.63
VDAC3-212ENST00000524291 CDY2AQ9Y6F7 541 aa4.9□□□□□ -1.63
VDAC3-212ENST00000524291 YY2O15391 372 aa4.89□□□□□ -1.63
VDAC3-212ENST00000524291 LSP1P33241 339 aa4.89□□□□□ -1.63
VDAC3-212ENST00000524291 KPNA1P52294 538 aaPredicted RBP4.89□□□□□ -1.63
VDAC3-212ENST00000524291 MANFP55145 182 aaKnown RBP4.89□□□□□ -1.63
VDAC3-212ENST00000524291 TUBA4AP68366 448 aa4.89□□□□□ -1.63
VDAC3-212ENST00000524291 SLC10A2Q12908 348 aaPredicted RBP4.89□□□□□ -1.63
VDAC3-212ENST00000524291 GRM1Q13255 1194 aa4.89□□□□□ -1.63
VDAC3-212ENST00000524291 SF3B3Q15393 1217 aaKnown RBP4.89□□□□□ -1.63
VDAC3-212ENST00000524291 ETFDHQ16134 617 aa4.89□□□□□ -1.63
VDAC3-212ENST00000524291 GEN1Q17RS7 908 aa4.89□□□□□ -1.63
VDAC3-212ENST00000524291 PEG10Q86TG7 708 aaKnown RBP4.89□□□□□ -1.63
VDAC3-212ENST00000524291 KIF18BQ86Y91 864 aa4.89□□□□□ -1.63
VDAC3-212ENST00000524291 SLC41A1Q8IVJ1 513 aa4.89□□□□□ -1.63
VDAC3-212ENST00000524291 TRMT2AQ8IZ69 625 aaKnown RBP4.89□□□□□ -1.63
VDAC3-212ENST00000524291 ZNF48Q96MX3 618 aaPredicted RBP4.89□□□□□ -1.63
VDAC3-212ENST00000524291 C8orf37Q96NL8 207 aa4.89□□□□□ -1.63
VDAC3-212ENST00000524291 WACQ9BTA9 647 aa4.89□□□□□ -1.63
VDAC3-212ENST00000524291 MRI1Q9BV20 369 aa4.89□□□□□ -1.63
VDAC3-212ENST00000524291 ZNF891A8MT65 544 aaPredicted RBP4.88□□□□□ -1.63
VDAC3-212ENST00000524291 ALOX15P16050 662 aaPredicted RBP4.88□□□□□ -1.63
VDAC3-212ENST00000524291 CCKBRP32239 447 aa4.88□□□□□ -1.63
VDAC3-212ENST00000524291 GRIA3P42263 894 aa4.88□□□□□ -1.63
VDAC3-212ENST00000524291 MAPK10P53779 464 aa4.88□□□□□ -1.63
VDAC3-212ENST00000524291 PHC1P78364 1004 aa4.88□□□□□ -1.63
VDAC3-212ENST00000524291 DSG1Q02413 1049 aa4.88□□□□□ -1.63
VDAC3-212ENST00000524291 KLF9Q13886 244 aaPredicted RBP4.88□□□□□ -1.63
VDAC3-212ENST00000524291 NAALADL2Q58DX5 795 aa4.88□□□□□ -1.63
VDAC3-212ENST00000524291 RUSC1-AS1Q66K80 236 aa4.88□□□□□ -1.63
VDAC3-212ENST00000524291 ZNF517Q6ZMY9 492 aaPredicted RBP4.88□□□□□ -1.63
VDAC3-212ENST00000524291 FBXO18Q8NFZ0 1043 aa4.88□□□□□ -1.63
VDAC3-212ENST00000524291 RGMAQ96B86 450 aa4.88□□□□□ -1.63
VDAC3-212ENST00000524291 FBXL20Q96IG2 436 aa4.88□□□□□ -1.63
VDAC3-212ENST00000524291 MS4A5Q9H3V2 200 aa4.88□□□□□ -1.63
VDAC3-212ENST00000524291 AOX1Q06278 1338 aa4.88□□□□□ -1.63
VDAC3-212ENST00000524291 CACNA1IQ9P0X4 2223 aa4.87□□□□□ -1.63
VDAC3-212ENST00000524291 MPPED1O15442 326 aa4.87□□□□□ -1.63
VDAC3-212ENST00000524291 RAP2AP10114 183 aa4.87□□□□□ -1.63
VDAC3-212ENST00000524291 KELP23276 732 aa4.87□□□□□ -1.63
VDAC3-212ENST00000524291 UBXN2BQ14CS0 331 aa4.87□□□□□ -1.63
VDAC3-212ENST00000524291 MST1LQ2TV78 715 aa4.87□□□□□ -1.63
VDAC3-212ENST00000524291 LCE1EQ5T753 118 aa4.87□□□□□ -1.63
VDAC3-212ENST00000524291 KIAA0895LQ68EN5 471 aa4.87□□□□□ -1.63
VDAC3-212ENST00000524291 FRMD7Q6ZUT3 714 aa4.87□□□□□ -1.63
VDAC3-212ENST00000524291 LILRB2Q8N423 598 aa4.87□□□□□ -1.63
VDAC3-212ENST00000524291 ARMC5Q96C12 935 aa4.87□□□□□ -1.63
VDAC3-212ENST00000524291 PRDM12Q9H4Q4 367 aa4.87□□□□□ -1.63
VDAC3-212ENST00000524291 NRIP3Q9NQ35 241 aa4.87□□□□□ -1.63
VDAC3-212ENST00000524291 TBC1D30Q9Y2I9 924 aa4.87□□□□□ -1.63
VDAC3-212ENST00000524291 AKR1B10O60218 316 aa4.86□□□□□ -1.63
VDAC3-212ENST00000524291 KPNA6O60684 536 aa4.86□□□□□ -1.63
VDAC3-212ENST00000524291 PRSS23O95084 383 aa4.86□□□□□ -1.63
VDAC3-212ENST00000524291 CKBP12277 381 aa4.86□□□□□ -1.63
VDAC3-212ENST00000524291 ATP5JP18859 108 aa4.86□□□□□ -1.63
VDAC3-212ENST00000524291 SLC6A2P23975 617 aa4.86□□□□□ -1.63
VDAC3-212ENST00000524291 TKTP29401 623 aaKnown RBP4.86□□□□□ -1.63
VDAC3-212ENST00000524291 ADSLP30566 484 aaPredicted RBP4.86□□□□□ -1.63
VDAC3-212ENST00000524291 SREBF1P36956 1147 aa4.86□□□□□ -1.63
VDAC3-212ENST00000524291 LGALS4P56470 323 aa4.86□□□□□ -1.63
VDAC3-212ENST00000524291 SP140Q13342 867 aa4.86□□□□□ -1.63
VDAC3-212ENST00000524291 NBPF8Q3BBV2 869 aa4.86□□□□□ -1.63
VDAC3-212ENST00000524291 AFMIDQ63HM1 303 aa4.86□□□□□ -1.63
VDAC3-212ENST00000524291 VWA1Q6PCB0 445 aa4.86□□□□□ -1.63
VDAC3-212ENST00000524291 OR7D4Q8NG98 312 aa4.86□□□□□ -1.63
VDAC3-212ENST00000524291 TFAP2BQ92481 460 aa4.86□□□□□ -1.63
VDAC3-212ENST00000524291 MKL1Q969V6 931 aa4.86□□□□□ -1.63
VDAC3-212ENST00000524291 KCTD10Q9H3F6 313 aa4.86□□□□□ -1.63
VDAC3-212ENST00000524291 MOCS1Q9NZB8 636 aa4.86□□□□□ -1.63
VDAC3-212ENST00000524291 MAGEC2Q9UBF1 373 aaPredicted RBP4.86□□□□□ -1.63
VDAC3-212ENST00000524291 SIK3Q9Y2K2 1263 aa4.86□□□□□ -1.63
VDAC3-212ENST00000524291 ATRNL1Q5VV63 1379 aa4.86□□□□□ -1.63
VDAC3-212ENST00000524291 LINC01548A6NM66 108 aa4.85□□□□□ -1.63
VDAC3-212ENST00000524291 KDM1AO60341 852 aa4.85□□□□□ -1.63
VDAC3-212ENST00000524291 RAB11FIP3O75154 756 aa4.85□□□□□ -1.63
VDAC3-212ENST00000524291 NEK4P51957 841 aa4.85□□□□□ -1.63
VDAC3-212ENST00000524291 FOXG1P55316 489 aaPredicted RBP4.85□□□□□ -1.63
VDAC3-212ENST00000524291 PITRM1Q5JRX3 1037 aa4.85□□□□□ -1.63
VDAC3-212ENST00000524291 SLC9A4Q6AI14 798 aa4.85□□□□□ -1.63
VDAC3-212ENST00000524291 SEMA6DQ8NFY4 1073 aa4.85□□□□□ -1.63
VDAC3-212ENST00000524291 SREK1Q8WXA9 508 aaKnown RBP4.85□□□□□ -1.63
VDAC3-212ENST00000524291 MARS2Q96GW9 593 aaKnown RBP4.85□□□□□ -1.63
VDAC3-212ENST00000524291 UHRF1Q96T88 793 aaPredicted RBP4.85□□□□□ -1.63
VDAC3-212ENST00000524291 BHMT2Q9H2M3 363 aa4.85□□□□□ -1.63
VDAC3-212ENST00000524291 BCO1Q9HAY6 547 aa4.85□□□□□ -1.63
VDAC3-212ENST00000524291 ZNF580Q9UK33 172 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms