RNA–Protein interactions for RNA: ENST00000523824.5

NSMCE2-213, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-213ENST00000523824 FZD5Q13467 585 aa8.77□□□□□ -1.01
NSMCE2-213ENST00000523824 PPM1JQ5JR12 505 aa8.77□□□□□ -1.01
NSMCE2-213ENST00000523824 LAIR1Q6GTX8 287 aa8.77□□□□□ -1.01
NSMCE2-213ENST00000523824 PRR23BQ6ZRT6 265 aa8.77□□□□□ -1.01
NSMCE2-213ENST00000523824 RUFY3Q7L099 469 aa8.77□□□□□ -1.01
NSMCE2-213ENST00000523824 SKAP1Q86WV1 359 aa8.77□□□□□ -1.01
NSMCE2-213ENST00000523824 ZBTB8OSQ8IWT0 167 aa8.77□□□□□ -1.01
NSMCE2-213ENST00000523824 CELF5Q8N6W0 485 aaKnown RBP8.77□□□□□ -1.01
NSMCE2-213ENST00000523824 NETO1Q8TDF5 533 aa8.77□□□□□ -1.01
NSMCE2-213ENST00000523824 PIGOQ8TEQ8 1089 aa8.77□□□□□ -1.01
NSMCE2-213ENST00000523824 DNASE1L2Q92874 299 aa8.77□□□□□ -1.01
NSMCE2-213ENST00000523824 ZNF274Q96GC6 653 aaPredicted RBP8.77□□□□□ -1.01
NSMCE2-213ENST00000523824 PRIMPOLQ96LW4 560 aa8.77□□□□□ -1.01
NSMCE2-213ENST00000523824 PHF12Q96QT6 1004 aa8.77□□□□□ -1.01
NSMCE2-213ENST00000523824 ADPGKQ9BRR6 497 aa8.77□□□□□ -1.01
NSMCE2-213ENST00000523824 LARP6Q9BRS8 491 aaKnown RBP8.77□□□□□ -1.01
NSMCE2-213ENST00000523824 LMAN1LQ9HAT1 526 aa8.77□□□□□ -1.01
NSMCE2-213ENST00000523824 ZFP14Q9HCL3 533 aa8.77□□□□□ -1.01
NSMCE2-213ENST00000523824 MTRRQ9UBK8 725 aa8.77□□□□□ -1.01
NSMCE2-213ENST00000523824 PCDHA12Q9UN75 941 aa8.77□□□□□ -1.01
NSMCE2-213ENST00000523824 CDY1Q9Y6F8 540 aa8.77□□□□□ -1.01
NSMCE2-213ENST00000523824 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.77□□□□□ -1.01
NSMCE2-213ENST00000523824 MIA3Q5JRA6 1907 aa8.77□□□□□ -1.01
NSMCE2-213ENST00000523824 TDRD15B5MCY1 1934 aaKnown RBP8.76□□□□□ -1.01
NSMCE2-213ENST00000523824 MYH15Q9Y2K3 1946 aa8.76□□□□□ -1.01
NSMCE2-213ENST00000523824 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.76□□□□□ -1.01
NSMCE2-213ENST00000523824 SLC30A4O14863 429 aa8.76□□□□□ -1.01
NSMCE2-213ENST00000523824 TRAPPC3O43617 180 aa8.76□□□□□ -1.01
NSMCE2-213ENST00000523824 USO1O60763 962 aaKnown RBP8.76□□□□□ -1.01
NSMCE2-213ENST00000523824 LRP3O75074 770 aa8.76□□□□□ -1.01
NSMCE2-213ENST00000523824 RECQL4O94761 1208 aa8.76□□□□□ -1.01
NSMCE2-213ENST00000523824 B3GAT3O94766 335 aa8.76□□□□□ -1.01
NSMCE2-213ENST00000523824 RETP07949 1114 aa8.76□□□□□ -1.01
NSMCE2-213ENST00000523824 CEBPBP17676 345 aa8.76□□□□□ -1.01
NSMCE2-213ENST00000523824 LIG1P18858 919 aa8.76□□□□□ -1.01
NSMCE2-213ENST00000523824 FGFR3P22607 806 aa8.76□□□□□ -1.01
NSMCE2-213ENST00000523824 RARRES1P49788 294 aa8.76□□□□□ -1.01
NSMCE2-213ENST00000523824 CCR3P51677 355 aa8.76□□□□□ -1.01
NSMCE2-213ENST00000523824 SPIRE1Q08AE8 756 aa8.76□□□□□ -1.01
NSMCE2-213ENST00000523824 TOB2Q14106 344 aaPredicted RBP8.76□□□□□ -1.01
NSMCE2-213ENST00000523824 GRM2Q14416 872 aa8.76□□□□□ -1.01
NSMCE2-213ENST00000523824 SLC5A9Q2M3M2 681 aa8.76□□□□□ -1.01
NSMCE2-213ENST00000523824 MAMSTRQ6ZN01 415 aa8.76□□□□□ -1.01
NSMCE2-213ENST00000523824 ANKS3Q6ZW76 656 aa8.76□□□□□ -1.01
NSMCE2-213ENST00000523824 NOSTRINQ8IVI9 506 aa8.76□□□□□ -1.01
NSMCE2-213ENST00000523824 IRF7Q92985 503 aa8.76□□□□□ -1.01
NSMCE2-213ENST00000523824 HSD17B14Q9BPX1 270 aa8.76□□□□□ -1.01
NSMCE2-213ENST00000523824 CORO1BQ9BR76 489 aa8.76□□□□□ -1.01
NSMCE2-213ENST00000523824 IER2Q9BTL4 223 aa8.76□□□□□ -1.01
NSMCE2-213ENST00000523824 TRMT61BQ9BVS5 477 aaKnown RBP8.76□□□□□ -1.01
NSMCE2-213ENST00000523824 CHRDQ9H2X0 955 aa8.76□□□□□ -1.01
NSMCE2-213ENST00000523824 FZD8Q9H461 694 aa8.76□□□□□ -1.01
NSMCE2-213ENST00000523824 AVENQ9NQS1 362 aaPredicted RBP8.76□□□□□ -1.01
NSMCE2-213ENST00000523824 GDAQ9Y2T3 454 aa8.76□□□□□ -1.01
NSMCE2-213ENST00000523824 BACE2Q9Y5Z0 518 aa8.76□□□□□ -1.01
NSMCE2-213ENST00000523824 CYP46A1Q9Y6A2 500 aa8.76□□□□□ -1.01
NSMCE2-213ENST00000523824 CHD6Q8TD26 2715 aa8.76□□□□□ -1.01
NSMCE2-213ENST00000523824 A0A087WWV3 80 aa8.75□□□□□ -1.01
NSMCE2-213ENST00000523824 SHISA7A6NL88 538 aa8.75□□□□□ -1.01
NSMCE2-213ENST00000523824 PRRG1O14668 218 aa8.75□□□□□ -1.01
NSMCE2-213ENST00000523824 ZNF197O14709 1029 aa8.75□□□□□ -1.01
NSMCE2-213ENST00000523824 CDKL5O76039 1030 aa8.75□□□□□ -1.01
NSMCE2-213ENST00000523824 XRCC6P12956 609 aaKnown RBP eCLIP8.75□□□□□ -1.01
NSMCE2-213ENST00000523824 TDGF1P13385 188 aa8.75□□□□□ -1.01
NSMCE2-213ENST00000523824 ATP2B1P20020 1258 aa8.75□□□□□ -1.01
NSMCE2-213ENST00000523824 TKTP29401 623 aaKnown RBP8.75□□□□□ -1.01
NSMCE2-213ENST00000523824 GDI1P31150 447 aa8.75□□□□□ -1.01
NSMCE2-213ENST00000523824 CXCL12P48061 93 aa8.75□□□□□ -1.01
NSMCE2-213ENST00000523824 RBM25P49756 843 aaKnown RBP8.75□□□□□ -1.01
NSMCE2-213ENST00000523824 ARPP19P56211 112 aa8.75□□□□□ -1.01
NSMCE2-213ENST00000523824 PRPF4BQ13523 1007 aaKnown RBP8.75□□□□□ -1.01
NSMCE2-213ENST00000523824 SIM2Q14190 667 aaPredicted RBP8.75□□□□□ -1.01
NSMCE2-213ENST00000523824 NAB2Q15742 525 aa8.75□□□□□ -1.01
NSMCE2-213ENST00000523824 MAPK6Q16659 721 aa8.75□□□□□ -1.01
NSMCE2-213ENST00000523824 FAM187BQ17R55 369 aa8.75□□□□□ -1.01
NSMCE2-213ENST00000523824 FAM78AQ5JUQ0 283 aa8.75□□□□□ -1.01
NSMCE2-213ENST00000523824 MCPH1Q8NEM0 835 aa8.75□□□□□ -1.01
NSMCE2-213ENST00000523824 ZNF461Q8TAF7 563 aa8.75□□□□□ -1.01
NSMCE2-213ENST00000523824 OXER1Q8TDS5 423 aa8.75□□□□□ -1.01
NSMCE2-213ENST00000523824 FAM3CQ92520 227 aa8.75□□□□□ -1.01
NSMCE2-213ENST00000523824 UROC1Q96N76 676 aa8.75□□□□□ -1.01
NSMCE2-213ENST00000523824 C2orf40Q9H1Z8 148 aa8.75□□□□□ -1.01
NSMCE2-213ENST00000523824 CXCL16Q9H2A7 254 aa8.75□□□□□ -1.01
NSMCE2-213ENST00000523824 PDZD7Q9H5P4 517 aa8.75□□□□□ -1.01
NSMCE2-213ENST00000523824 CYP4F11Q9HBI6 524 aa8.75□□□□□ -1.01
NSMCE2-213ENST00000523824 ZSWIM6Q9HCJ5 1215 aa8.75□□□□□ -1.01
NSMCE2-213ENST00000523824 ZNF334Q9HCZ1 680 aaPredicted RBP8.75□□□□□ -1.01
NSMCE2-213ENST00000523824 GPRC5CQ9NQ84 441 aa8.75□□□□□ -1.01
NSMCE2-213ENST00000523824 SEMA4GQ9NTN9 838 aa8.75□□□□□ -1.01
NSMCE2-213ENST00000523824 PIAS3Q9Y6X2 628 aa8.75□□□□□ -1.01
NSMCE2-213ENST00000523824 PATJQ8NI35 1801 aa8.75□□□□□ -1.01
NSMCE2-213ENST00000523824 ARHGEF37A1IGU5 675 aa8.74□□□□□ -1.01
NSMCE2-213ENST00000523824 TTLL13PA6NNM8 815 aa8.74□□□□□ -1.01
NSMCE2-213ENST00000523824 TMEM189-UBE2V1I3L0A0 370 aa8.74□□□□□ -1.01
NSMCE2-213ENST00000523824 I3L4J1 428 aa8.74□□□□□ -1.01
NSMCE2-213ENST00000523824 ACKR2O00590 384 aa8.74□□□□□ -1.01
NSMCE2-213ENST00000523824 ZNF263O14978 683 aa8.74□□□□□ -1.01
NSMCE2-213ENST00000523824 REC8O95072 547 aa8.74□□□□□ -1.01
NSMCE2-213ENST00000523824 PRKCBP05771 671 aa8.74□□□□□ -1.01
NSMCE2-213ENST00000523824 PSMC3P17980 439 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms