RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-223ENST00000523636 MSTNO14793 375 aa5.97□□□□□ -1.45
PABPC1-223ENST00000523636 TBX3O15119 743 aa5.97□□□□□ -1.45
PABPC1-223ENST00000523636 KINO60870 393 aaKnown RBP5.97□□□□□ -1.45
PABPC1-223ENST00000523636 CABYRO75952 493 aa5.97□□□□□ -1.45
PABPC1-223ENST00000523636 MYL1P05976 194 aa5.97□□□□□ -1.45
PABPC1-223ENST00000523636 FGFR2P21802 821 aa5.97□□□□□ -1.45
PABPC1-223ENST00000523636 TMEM132BQ14DG7 1078 aa5.97□□□□□ -1.45
PABPC1-223ENST00000523636 PPP2R5AQ15172 486 aa5.97□□□□□ -1.45
PABPC1-223ENST00000523636 COL28A1Q2UY09 1125 aa5.97□□□□□ -1.45
PABPC1-223ENST00000523636 RNF43Q68DV7 783 aa5.97□□□□□ -1.45
PABPC1-223ENST00000523636 LETMD1Q6P1Q0 360 aa5.97□□□□□ -1.45
PABPC1-223ENST00000523636 LMBR1LQ6UX01 489 aa5.97□□□□□ -1.45
PABPC1-223ENST00000523636 KSR2Q6VAB6 950 aa5.97□□□□□ -1.45
PABPC1-223ENST00000523636 RUFY4Q6ZNE9 571 aa5.97□□□□□ -1.45
PABPC1-223ENST00000523636 ZAR1Q86SH2 424 aa5.97□□□□□ -1.45
PABPC1-223ENST00000523636 TTC6Q86TZ1 520 aa5.97□□□□□ -1.45
PABPC1-223ENST00000523636 WDR66Q8TBY9 1149 aa5.97□□□□□ -1.45
PABPC1-223ENST00000523636 ATP8B4Q8TF62 1192 aa5.97□□□□□ -1.45
PABPC1-223ENST00000523636 COX4I2Q96KJ9 171 aa5.97□□□□□ -1.45
PABPC1-223ENST00000523636 DHRS1Q96LJ7 313 aa5.97□□□□□ -1.45
PABPC1-223ENST00000523636 MMP19Q99542 508 aa5.97□□□□□ -1.45
PABPC1-223ENST00000523636 DPH2Q9BQC3 489 aaPredicted RBP5.97□□□□□ -1.45
PABPC1-223ENST00000523636 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.97□□□□□ -1.453e-8■□□□□ 8.7
PABPC1-223ENST00000523636 EPC1Q9H2F5 836 aa5.97□□□□□ -1.45
PABPC1-223ENST00000523636 KANSL2Q9H9L4 492 aa5.97□□□□□ -1.45
PABPC1-223ENST00000523636 IFT122Q9HBG6 1241 aa5.97□□□□□ -1.45
PABPC1-223ENST00000523636 ACTR10Q9NZ32 417 aa5.97□□□□□ -1.45
PABPC1-223ENST00000523636 INTUQ9ULD6 942 aa5.97□□□□□ -1.45
PABPC1-223ENST00000523636 CEP131Q9UPN4 1083 aa5.97□□□□□ -1.45
PABPC1-223ENST00000523636 R3HCC1Q9Y3T6 440 aaKnown RBP5.97□□□□□ -1.45
PABPC1-223ENST00000523636 LCTP09848 1927 aa5.97□□□□□ -1.45
PABPC1-223ENST00000523636 GREB1Q4ZG55 1949 aa5.97□□□□□ -1.45
PABPC1-223ENST00000523636 CACNA1EQ15878 2313 aa5.97□□□□□ -1.45
PABPC1-223ENST00000523636 LRRK2Q5S007 2527 aa5.96□□□□□ -1.45
PABPC1-223ENST00000523636 BOD1L1Q8NFC6 3051 aa5.96□□□□□ -1.45
PABPC1-223ENST00000523636 ABHD14A-ACY1A0A1B0GW23 586 aa5.96□□□□□ -1.46
PABPC1-223ENST00000523636 BICDL2A1A5D9 508 aa5.96□□□□□ -1.46
PABPC1-223ENST00000523636 HMX2A2RU54 273 aa5.96□□□□□ -1.46
PABPC1-223ENST00000523636 SLITRK5O94991 958 aa5.96□□□□□ -1.46
PABPC1-223ENST00000523636 MMP1P03956 469 aa5.96□□□□□ -1.46
PABPC1-223ENST00000523636 DCNP07585 359 aaKnown RBP5.96□□□□□ -1.46
PABPC1-223ENST00000523636 ETV3P41162 512 aa5.96□□□□□ -1.46
PABPC1-223ENST00000523636 CDKN1CP49918 316 aaPredicted RBP5.96□□□□□ -1.46
PABPC1-223ENST00000523636 TERF1P54274 439 aa5.96□□□□□ -1.46
PABPC1-223ENST00000523636 EXOSC10Q01780 885 aaKnown RBP5.96□□□□□ -1.46
PABPC1-223ENST00000523636 CYP27A1Q02318 531 aa5.96□□□□□ -1.46
PABPC1-223ENST00000523636 KCNC3Q14003 757 aa5.96□□□□□ -1.46
PABPC1-223ENST00000523636 CNGB1Q14028 1251 aaPredicted RBP5.96□□□□□ -1.46
PABPC1-223ENST00000523636 RAB33AQ14088 237 aa5.96□□□□□ -1.46
PABPC1-223ENST00000523636 SIM2Q14190 667 aaPredicted RBP5.96□□□□□ -1.46
PABPC1-223ENST00000523636 NFE2Q16621 373 aaPredicted RBP5.96□□□□□ -1.46
PABPC1-223ENST00000523636 CPSF6Q16630 551 aaKnown RBP eCLIP5.96□□□□□ -1.46
PABPC1-223ENST00000523636 FSCN1Q16658 493 aaKnown RBP5.96□□□□□ -1.46
PABPC1-223ENST00000523636 TMEM95Q3KNT9 176 aa5.96□□□□□ -1.46
PABPC1-223ENST00000523636 LRRC24Q50LG9 513 aa5.96□□□□□ -1.46
PABPC1-223ENST00000523636 BRDTQ58F21 947 aaPredicted RBP5.96□□□□□ -1.46
PABPC1-223ENST00000523636 CC2D1AQ6P1N0 951 aaPredicted RBP5.96□□□□□ -1.46
PABPC1-223ENST00000523636 SYCE2Q6PIF2 218 aa5.96□□□□□ -1.46
PABPC1-223ENST00000523636 OGFOD3Q6PK18 319 aa5.96□□□□□ -1.46
PABPC1-223ENST00000523636 UNC5AQ6ZN44 842 aa5.96□□□□□ -1.46
PABPC1-223ENST00000523636 CHPFQ8IZ52 775 aa5.96□□□□□ -1.46
PABPC1-223ENST00000523636 DNAJB8Q8NHS0 232 aa5.96□□□□□ -1.46
PABPC1-223ENST00000523636 FEZF2Q8TBJ5 459 aa5.96□□□□□ -1.46
PABPC1-223ENST00000523636 SRPK1Q96SB4 655 aaKnown RBP5.96□□□□□ -1.46
PABPC1-223ENST00000523636 KIF2CQ99661 725 aa5.96□□□□□ -1.46
PABPC1-223ENST00000523636 DBNDD2Q9BQY9 259 aa5.96□□□□□ -1.46
PABPC1-223ENST00000523636 DUSP23Q9BVJ7 150 aa5.96□□□□□ -1.46
PABPC1-223ENST00000523636 LRRC27Q9C0I9 530 aa5.96□□□□□ -1.46
PABPC1-223ENST00000523636 KIAA1683Q9H0B3 1180 aa5.96□□□□□ -1.46
PABPC1-223ENST00000523636 LMAN2LQ9H0V9 348 aa5.96□□□□□ -1.46
PABPC1-223ENST00000523636 SIL1Q9H173 461 aa5.96□□□□□ -1.46
PABPC1-223ENST00000523636 RXFP3Q9NSD7 469 aa5.96□□□□□ -1.46
PABPC1-223ENST00000523636 HERC5Q9UII4 1024 aaKnown RBP5.96□□□□□ -1.46
PABPC1-223ENST00000523636 NUDCQ9Y266 331 aa5.96□□□□□ -1.46
PABPC1-223ENST00000523636 RAI2Q9Y5P3 530 aa5.96□□□□□ -1.46
PABPC1-223ENST00000523636 DDX49Q9Y6V7 483 aaKnown RBP5.96□□□□□ -1.46
PABPC1-223ENST00000523636 COL6A6A6NMZ7 2263 aa5.96□□□□□ -1.46
PABPC1-223ENST00000523636 NAV1Q8NEY1 1877 aa5.96□□□□□ -1.46
PABPC1-223ENST00000523636 MAPK8IP3Q9UPT6 1336 aa5.96□□□□□ -1.46
PABPC1-223ENST00000523636 GPR75-ASB3A0A0A6YYF3 556 aa5.95□□□□□ -1.46
PABPC1-223ENST00000523636 CCDC163A0A0D9SF12 145 aa5.95□□□□□ -1.46
PABPC1-223ENST00000523636 A0A1W2PRG0 241 aa5.95□□□□□ -1.46
PABPC1-223ENST00000523636 UBOX5O94941 541 aa5.95□□□□□ -1.46
PABPC1-223ENST00000523636 DDX58O95786 925 aaKnown RBP5.95□□□□□ -1.46
PABPC1-223ENST00000523636 GH2P01242 217 aa5.95□□□□□ -1.46
PABPC1-223ENST00000523636 GBP1P32455 592 aa5.95□□□□□ -1.46
PABPC1-223ENST00000523636 GUCY1A2P33402 732 aa5.95□□□□□ -1.46
PABPC1-223ENST00000523636 NRIP1P48552 1158 aa5.95□□□□□ -1.46
PABPC1-223ENST00000523636 TRAPPC10P48553 1259 aa5.95□□□□□ -1.46
PABPC1-223ENST00000523636 MASP1P48740 699 aa5.95□□□□□ -1.46
PABPC1-223ENST00000523636 CDK5R2Q13319 367 aa5.95□□□□□ -1.46
PABPC1-223ENST00000523636 DOC2BQ14184 412 aa5.95□□□□□ -1.46
PABPC1-223ENST00000523636 COG2Q14746 738 aa5.95□□□□□ -1.46
PABPC1-223ENST00000523636 FXNQ16595 210 aa5.95□□□□□ -1.46
PABPC1-223ENST00000523636 BBS9Q3SYG4 887 aa5.95□□□□□ -1.46
PABPC1-223ENST00000523636 CYP27C1Q4G0S4 372 aa5.95□□□□□ -1.46
PABPC1-223ENST00000523636 INO80DQ53TQ3 878 aaPredicted RBP5.95□□□□□ -1.46
PABPC1-223ENST00000523636 CAVIN4Q5BKX8 364 aa5.95□□□□□ -1.46
PABPC1-223ENST00000523636 NKAPLQ5M9Q1 402 aa5.95□□□□□ -1.46
PABPC1-223ENST00000523636 C1QTNF12Q5T7M4 302 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms