RNA–Protein interactions for RNA: ENST00000523588.1

CPNE3-207, Transcript of copine 3, humanhuman

TSL 2

Gene CPNE3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-207ENST00000523588 DRC7Q8IY82 874 aa7.11□□□□□ -1.27
CPNE3-207ENST00000523588 PLEKHG4BQ96PX9 1271 aa7.11□□□□□ -1.27
CPNE3-207ENST00000523588 NEU1Q99519 415 aa7.11□□□□□ -1.27
CPNE3-207ENST00000523588 FBXO34Q9NWN3 711 aa7.11□□□□□ -1.27
CPNE3-207ENST00000523588 PARPBPQ9NWS1 579 aa7.11□□□□□ -1.27
CPNE3-207ENST00000523588 PNMA8BQ9ULN7 279 aaPredicted RBP7.11□□□□□ -1.27
CPNE3-207ENST00000523588 CHST2Q9Y4C5 530 aa7.11□□□□□ -1.27
CPNE3-207ENST00000523588 EID1Q9Y6B2 187 aa7.11□□□□□ -1.27
CPNE3-207ENST00000523588 AHRRA9YTQ3 701 aa7.1□□□□□ -1.27
CPNE3-207ENST00000523588 FAM20BO75063 409 aa7.1□□□□□ -1.27
CPNE3-207ENST00000523588 RFPL1O75677 317 aa7.1□□□□□ -1.27
CPNE3-207ENST00000523588 POMCP01189 267 aa7.1□□□□□ -1.27
CPNE3-207ENST00000523588 CHN2P52757 468 aa7.1□□□□□ -1.27
CPNE3-207ENST00000523588 RAB39AQ14964 217 aa7.1□□□□□ -1.27
CPNE3-207ENST00000523588 UBXN2BQ14CS0 331 aa7.1□□□□□ -1.27
CPNE3-207ENST00000523588 NFE2Q16621 373 aaPredicted RBP7.1□□□□□ -1.27
CPNE3-207ENST00000523588 DBX2Q6ZNG2 339 aa7.1□□□□□ -1.27
CPNE3-207ENST00000523588 UBE3BQ7Z3V4 1068 aa7.1□□□□□ -1.27
CPNE3-207ENST00000523588 JDP2Q8WYK2 163 aa7.1□□□□□ -1.27
CPNE3-207ENST00000523588 C11orf54Q9H0W9 315 aaPredicted RBP7.1□□□□□ -1.27
CPNE3-207ENST00000523588 SLC12A5Q9H2X9 1139 aa7.1□□□□□ -1.27
CPNE3-207ENST00000523588 CALCOCO1Q9P1Z2 691 aa7.1□□□□□ -1.27
CPNE3-207ENST00000523588 EIF2B4Q9UI10 523 aaKnown RBP7.1□□□□□ -1.27
CPNE3-207ENST00000523588 TCRBV7S2A1N4TA0A589 114 aa7.09□□□□□ -1.27
CPNE3-207ENST00000523588 ZNF185O15231 689 aa7.09□□□□□ -1.27
CPNE3-207ENST00000523588 SCAF4O95104 1147 aaKnown RBP7.09□□□□□ -1.27
CPNE3-207ENST00000523588 NR4A1P22736 598 aa7.09□□□□□ -1.27
CPNE3-207ENST00000523588 SLC6A2P23975 617 aa7.09□□□□□ -1.27
CPNE3-207ENST00000523588 LRRC41Q15345 812 aa7.09□□□□□ -1.27
CPNE3-207ENST00000523588 TPH2Q8IWU9 490 aa7.09□□□□□ -1.27
CPNE3-207ENST00000523588 CPT1CQ8TCG5 803 aa7.09□□□□□ -1.27
CPNE3-207ENST00000523588 HPS3Q969F9 1004 aa7.09□□□□□ -1.27
CPNE3-207ENST00000523588 DCLRE1CQ96SD1 692 aaKnown RBP7.09□□□□□ -1.27
CPNE3-207ENST00000523588 ZNF768Q9H5H4 540 aaKnown RBP7.09□□□□□ -1.27
CPNE3-207ENST00000523588 G3BP2Q9UN86 482 aaKnown RBP7.09□□□□□ -1.27
CPNE3-207ENST00000523588 LRRC14BA6NHZ5 514 aa7.08□□□□□ -1.28
CPNE3-207ENST00000523588 PRSS23O95084 383 aa7.08□□□□□ -1.28
CPNE3-207ENST00000523588 RPLP2P05387 115 aaKnown RBP7.08□□□□□ -1.28
CPNE3-207ENST00000523588 SBK3P0C264 359 aa7.08□□□□□ -1.28
CPNE3-207ENST00000523588 CT47B1P0C2W7 299 aaPredicted RBP7.08□□□□□ -1.28
CPNE3-207ENST00000523588 ZFP36P26651 326 aaKnown RBP7.08□□□□□ -1.28
CPNE3-207ENST00000523588 SLC6A4P31645 630 aa7.08□□□□□ -1.28
CPNE3-207ENST00000523588 CYP2C19P33261 490 aa7.08□□□□□ -1.28
CPNE3-207ENST00000523588 RNASE9P60153 205 aaKnown RBP7.08□□□□□ -1.28
CPNE3-207ENST00000523588 KHDC1Q4VXA5 237 aaKnown RBP7.08□□□□□ -1.28
CPNE3-207ENST00000523588 ATAT1Q5SQI0 421 aa7.08□□□□□ -1.28
CPNE3-207ENST00000523588 AGAP9Q5VTM2 703 aa7.08□□□□□ -1.28
CPNE3-207ENST00000523588 CRIP3Q6Q6R5 217 aa7.08□□□□□ -1.28
CPNE3-207ENST00000523588 MED25Q71SY5 747 aa7.08□□□□□ -1.28
CPNE3-207ENST00000523588 MVB12AQ96EY5 273 aa7.08□□□□□ -1.28
CPNE3-207ENST00000523588 VRK1Q99986 396 aaPredicted RBP7.08□□□□□ -1.28
CPNE3-207ENST00000523588 TEX101Q9BY14 249 aa7.08□□□□□ -1.28
CPNE3-207ENST00000523588 VPS11Q9H270 941 aa7.08□□□□□ -1.28
CPNE3-207ENST00000523588 DIRC3C9JPN6 131 aa7.07□□□□□ -1.28
CPNE3-207ENST00000523588 GRM6O15303 877 aa7.07□□□□□ -1.28
CPNE3-207ENST00000523588 DTNBO60941 627 aa7.07□□□□□ -1.28
CPNE3-207ENST00000523588 RECQL4O94761 1208 aa7.07□□□□□ -1.28
CPNE3-207ENST00000523588 PEX11BO96011 259 aa7.07□□□□□ -1.28
CPNE3-207ENST00000523588 MALP21145 153 aa7.07□□□□□ -1.28
CPNE3-207ENST00000523588 FAM189BP81408 668 aa7.07□□□□□ -1.28
CPNE3-207ENST00000523588 SNAPC2Q13487 334 aa7.07□□□□□ -1.28
CPNE3-207ENST00000523588 PDCD4Q53EL6 469 aaKnown RBP7.07□□□□□ -1.28
CPNE3-207ENST00000523588 FNDC7Q5VTL7 733 aa7.07□□□□□ -1.28
CPNE3-207ENST00000523588 GADL1Q6ZQY3 521 aa7.07□□□□□ -1.28
CPNE3-207ENST00000523588 GDF7Q7Z4P5 450 aa7.07□□□□□ -1.28
CPNE3-207ENST00000523588 ZFPM1Q8IX07 1006 aa7.07□□□□□ -1.28
CPNE3-207ENST00000523588 IL17RDQ8NFM7 739 aa7.07□□□□□ -1.28
CPNE3-207ENST00000523588 PHACTR3Q96KR7 559 aa7.07□□□□□ -1.28
CPNE3-207ENST00000523588 AIFM3Q96NN9 605 aa7.07□□□□□ -1.28
CPNE3-207ENST00000523588 GSTO2Q9H4Y5 243 aa7.07□□□□□ -1.28
CPNE3-207ENST00000523588 TRPM5Q9NZQ8 1165 aa7.07□□□□□ -1.28
CPNE3-207ENST00000523588 NT5C1B-RDH14C9J2C7 533 aa7.06□□□□□ -1.28
CPNE3-207ENST00000523588 KIAA0391O15091 583 aaKnown RBP7.06□□□□□ -1.28
CPNE3-207ENST00000523588 SCGB1D2O95969 90 aa7.06□□□□□ -1.28
CPNE3-207ENST00000523588 ITGB1P05556 798 aa7.06□□□□□ -1.28
CPNE3-207ENST00000523588 LPOP22079 712 aaPredicted RBP7.06□□□□□ -1.28
CPNE3-207ENST00000523588 CREMQ03060 361 aa7.06□□□□□ -1.28
CPNE3-207ENST00000523588 TUBA3CQ13748 450 aa7.06□□□□□ -1.28
CPNE3-207ENST00000523588 ZNF267Q14586 743 aaPredicted RBP7.06□□□□□ -1.28
CPNE3-207ENST00000523588 PGS1Q32NB8 556 aa7.06□□□□□ -1.28
CPNE3-207ENST00000523588 LSM12Q3MHD2 195 aaKnown RBP7.06□□□□□ -1.28
CPNE3-207ENST00000523588 PABPC1LQ4VXU2 614 aaKnown RBP7.06□□□□□ -1.28
CPNE3-207ENST00000523588 IGFL4Q6B9Z1 124 aa7.06□□□□□ -1.28
CPNE3-207ENST00000523588 TUBA3EQ6PEY2 450 aa7.06□□□□□ -1.28
CPNE3-207ENST00000523588 B3GNT9Q6UX72 402 aa7.06□□□□□ -1.28
CPNE3-207ENST00000523588 EPM2AIP1Q7L775 607 aaPredicted RBP7.06□□□□□ -1.28
CPNE3-207ENST00000523588 RHOT2Q8IXI1 618 aa7.06□□□□□ -1.28
CPNE3-207ENST00000523588 Q8N1X5 172 aa7.06□□□□□ -1.28
CPNE3-207ENST00000523588 ZNF276Q8N554 614 aa7.06□□□□□ -1.28
CPNE3-207ENST00000523588 SLC46A2Q9BY10 475 aa7.06□□□□□ -1.28
CPNE3-207ENST00000523588 GPRC5BQ9NZH0 403 aa7.06□□□□□ -1.28
CPNE3-207ENST00000523588 SLC16A6O15403 523 aa7.05□□□□□ -1.28
CPNE3-207ENST00000523588 PRPF3O43395 683 aaKnown RBP7.05□□□□□ -1.28
CPNE3-207ENST00000523588 OFD1O75665 1012 aa7.05□□□□□ -1.28
CPNE3-207ENST00000523588 CD1AP06126 327 aa7.05□□□□□ -1.28
CPNE3-207ENST00000523588 ALAS1P13196 640 aa7.05□□□□□ -1.28
CPNE3-207ENST00000523588 GCSHP23434 173 aa7.05□□□□□ -1.28
CPNE3-207ENST00000523588 MAP2K6P52564 334 aa7.05□□□□□ -1.28
CPNE3-207ENST00000523588 HK3P52790 923 aa7.05□□□□□ -1.28
CPNE3-207ENST00000523588 PPP2R5AQ15172 486 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms