RNA–Protein interactions for RNA: ENST00000523298.5

CTNNA1-238, Transcript of catenin alpha 1, human

TSL 2

Gene CTNNA1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-238	ENST00000523298	PCDHA1	Q9Y5I3	950 aa		5.81	□□□□□ -1.48
CTNNA1-238	ENST00000523298	ZNF536	O15090	1300 aa		5.8	□□□□□ -1.48
CTNNA1-238	ENST00000523298	USP19	O94966	1318 aa		5.8	□□□□□ -1.48
CTNNA1-238	ENST00000523298	CCDC78	A2IDD5	438 aa		5.8	□□□□□ -1.48
CTNNA1-238	ENST00000523298	SLC16A6	O15403	523 aa		5.8	□□□□□ -1.48
CTNNA1-238	ENST00000523298	CAND2	O75155	1236 aa		5.8	□□□□□ -1.48
CTNNA1-238	ENST00000523298	RAD17	O75943	681 aa		5.8	□□□□□ -1.48
CTNNA1-238	ENST00000523298	HRG	P04196	525 aa		5.8	□□□□□ -1.48
CTNNA1-238	ENST00000523298	IL2RB	P14784	551 aa		5.8	□□□□□ -1.48
CTNNA1-238	ENST00000523298	RAP2B	P61225	183 aa		5.8	□□□□□ -1.48
CTNNA1-238	ENST00000523298	COBLL1	Q53SF7	1204 aa		5.8	□□□□□ -1.48
CTNNA1-238	ENST00000523298	DACT2	Q5SW24	774 aa		5.8	□□□□□ -1.48
CTNNA1-238	ENST00000523298	UBXN11	Q5T124	520 aa		5.8	□□□□□ -1.48
CTNNA1-238	ENST00000523298	METRNL	Q641Q3	311 aa		5.8	□□□□□ -1.48
CTNNA1-238	ENST00000523298	IL31	Q6EBC2	164 aa		5.8	□□□□□ -1.48
CTNNA1-238	ENST00000523298	GADL1	Q6ZQY3	521 aa		5.8	□□□□□ -1.48
CTNNA1-238	ENST00000523298	GIMAP8	Q8ND71	665 aa	Predicted RBP	5.8	□□□□□ -1.48
CTNNA1-238	ENST00000523298	DNER	Q8NFT8	737 aa		5.8	□□□□□ -1.48
CTNNA1-238	ENST00000523298	MRGPRX1	Q96LB2	322 aa		5.8	□□□□□ -1.48
CTNNA1-238	ENST00000523298	NEU1	Q99519	415 aa		5.8	□□□□□ -1.48
CTNNA1-238	ENST00000523298	CHMP4A	Q9BY43	222 aa		5.8	□□□□□ -1.48
CTNNA1-238	ENST00000523298	C11orf54	Q9H0W9	315 aa	Predicted RBP	5.8	□□□□□ -1.48
CTNNA1-238	ENST00000523298	NELFA	Q9H3P2	528 aa		5.8	□□□□□ -1.48
CTNNA1-238	ENST00000523298	KMT5A	Q9NQR1	393 aa		5.8	□□□□□ -1.48
CTNNA1-238	ENST00000523298	PNPO	Q9NVS9	261 aa		5.8	□□□□□ -1.48
CTNNA1-238	ENST00000523298	VSX1	Q9NZR4	365 aa	Predicted RBP	5.8	□□□□□ -1.48
CTNNA1-238	ENST00000523298	POLH	Q9Y253	713 aa		5.8	□□□□□ -1.48
CTNNA1-238	ENST00000523298	SLC30A1	Q9Y6M5	507 aa		5.8	□□□□□ -1.48
CTNNA1-238	ENST00000523298	NPEPPSL1	A6NEC2	478 aa		5.79	□□□□□ -1.48
CTNNA1-238	ENST00000523298	TBKBP1	A7MCY6	615 aa		5.79	□□□□□ -1.48
CTNNA1-238	ENST00000523298	PATE3	B3GLJ2	98 aa		5.79	□□□□□ -1.48
CTNNA1-238	ENST00000523298	FAM227A	F5H4B4	570 aa		5.79	□□□□□ -1.48
CTNNA1-238	ENST00000523298		H3BUI4	141 aa		5.79	□□□□□ -1.48
CTNNA1-238	ENST00000523298	PMM2	O15305	246 aa		5.79	□□□□□ -1.48
CTNNA1-238	ENST00000523298	MATN4	O95460	622 aa		5.79	□□□□□ -1.48
CTNNA1-238	ENST00000523298	NPR1	P16066	1061 aa		5.79	□□□□□ -1.48
CTNNA1-238	ENST00000523298	HDC	P19113	662 aa		5.79	□□□□□ -1.48
CTNNA1-238	ENST00000523298	PHKA1	P46020	1223 aa		5.79	□□□□□ -1.48
CTNNA1-238	ENST00000523298	NEK3	P51956	506 aa		5.79	□□□□□ -1.48
CTNNA1-238	ENST00000523298	RABGGTB	P53611	331 aa		5.79	□□□□□ -1.48
CTNNA1-238	ENST00000523298	PURA	Q00577	322 aa	Known RBP	5.79	□□□□□ -1.48
CTNNA1-238	ENST00000523298	SEMA5A	Q13591	1074 aa		5.79	□□□□□ -1.48
CTNNA1-238	ENST00000523298	SURF1	Q15526	300 aa		5.79	□□□□□ -1.48
CTNNA1-238	ENST00000523298	ELAVL1	Q15717	326 aa	Known RBP	5.79	□□□□□ -1.48
CTNNA1-238	ENST00000523298	BMT2	Q1RMZ1	405 aa		5.79	□□□□□ -1.48
CTNNA1-238	ENST00000523298	SYCP2L	Q5T4T6	812 aa		5.79	□□□□□ -1.48
CTNNA1-238	ENST00000523298	CCSAP	Q6IQ19	270 aa	Predicted RBP	5.79	□□□□□ -1.48
CTNNA1-238	ENST00000523298	ZNF529	Q6P280	563 aa		5.79	□□□□□ -1.48
CTNNA1-238	ENST00000523298	CCDC149	Q6ZUS6	474 aa		5.79	□□□□□ -1.48
CTNNA1-238	ENST00000523298	ZNF808	Q8N4W9	903 aa	Predicted RBP	5.79	□□□□□ -1.48
CTNNA1-238	ENST00000523298	MB21D1	Q8N884	522 aa		5.79	□□□□□ -1.48
CTNNA1-238	ENST00000523298	PJA1	Q8NG27	643 aa		5.79	□□□□□ -1.48
CTNNA1-238	ENST00000523298	OR52N2	Q8NGI0	321 aa		5.79	□□□□□ -1.48
CTNNA1-238	ENST00000523298		Q8TCH9	128 aa		5.79	□□□□□ -1.48
CTNNA1-238	ENST00000523298	CDK5RAP3	Q96JB5	506 aa		5.79	□□□□□ -1.48
CTNNA1-238	ENST00000523298	NAA15	Q9BXJ9	866 aa	Known RBP	5.79	□□□□□ -1.48
CTNNA1-238	ENST00000523298	MRPL46	Q9H2W6	279 aa	Known RBP	5.79	□□□□□ -1.48
CTNNA1-238	ENST00000523298	CD248	Q9HCU0	757 aa		5.79	□□□□□ -1.48
CTNNA1-238	ENST00000523298	MAN1C1	Q9NR34	630 aa		5.79	□□□□□ -1.48
CTNNA1-238	ENST00000523298	MRPS18A	Q9NVS2	196 aa	Known RBP	5.79	□□□□□ -1.48
CTNNA1-238	ENST00000523298	PCDHA6	Q9UN73	950 aa		5.79	□□□□□ -1.48
CTNNA1-238	ENST00000523298	KIAA0391	O15091	583 aa	Known RBP	5.78	□□□□□ -1.48
CTNNA1-238	ENST00000523298	KRT18	P05783	430 aa	Known RBP	5.78	□□□□□ -1.48
CTNNA1-238	ENST00000523298	ATP5J	P18859	108 aa		5.78	□□□□□ -1.48
CTNNA1-238	ENST00000523298	HK1	P19367	917 aa		5.78	□□□□□ -1.48
CTNNA1-238	ENST00000523298	RPS19	P39019	145 aa	Known RBP	5.78	□□□□□ -1.48
CTNNA1-238	ENST00000523298	KIAA0753	Q2KHM9	967 aa		5.78	□□□□□ -1.48
CTNNA1-238	ENST00000523298	GJC2	Q5T442	439 aa	Predicted RBP	5.78	□□□□□ -1.48
CTNNA1-238	ENST00000523298		Q6ZRM9	215 aa		5.78	□□□□□ -1.48
CTNNA1-238	ENST00000523298	PDZD4	Q76G19	769 aa	Predicted RBP	5.78	□□□□□ -1.48
CTNNA1-238	ENST00000523298	DOK3	Q7L591	496 aa		5.78	□□□□□ -1.48
CTNNA1-238	ENST00000523298	MAEA	Q7L5Y9	396 aa		5.78	□□□□□ -1.48
CTNNA1-238	ENST00000523298	SRGAP1	Q7Z6B7	1085 aa		5.78	□□□□□ -1.48
CTNNA1-238	ENST00000523298	DAAM2	Q86T65	1068 aa		5.78	□□□□□ -1.48
CTNNA1-238	ENST00000523298	IL31RA	Q8NI17	732 aa		5.78	□□□□□ -1.48
CTNNA1-238	ENST00000523298	ARL8A	Q96BM9	186 aa		5.78	□□□□□ -1.48
CTNNA1-238	ENST00000523298	TEPSIN	Q96N21	525 aa		5.78	□□□□□ -1.48
CTNNA1-238	ENST00000523298	CPA4	Q9UI42	421 aa		5.78	□□□□□ -1.48
CTNNA1-238	ENST00000523298	JAG2	Q9Y219	1238 aa		5.78	□□□□□ -1.48
CTNNA1-238	ENST00000523298	CAPN8	A6NHC0	703 aa		5.77	□□□□□ -1.49
CTNNA1-238	ENST00000523298	LEFTY2	O00292	366 aa		5.77	□□□□□ -1.49
CTNNA1-238	ENST00000523298	ITGB3	P05106	788 aa		5.77	□□□□□ -1.49
CTNNA1-238	ENST00000523298	MYL1	P05976	194 aa		5.77	□□□□□ -1.49
CTNNA1-238	ENST00000523298	MYL3	P08590	195 aa		5.77	□□□□□ -1.49
CTNNA1-238	ENST00000523298	KIT	P10721	976 aa		5.77	□□□□□ -1.49
CTNNA1-238	ENST00000523298	CLRN1	P58418	232 aa		5.77	□□□□□ -1.49
CTNNA1-238	ENST00000523298	EXOSC9	Q06265	439 aa	Known RBP	5.77	□□□□□ -1.49
CTNNA1-238	ENST00000523298	CCDC157	Q569K6	752 aa		5.77	□□□□□ -1.49
CTNNA1-238	ENST00000523298	THEMIS2	Q5TEJ8	643 aa		5.77	□□□□□ -1.49
CTNNA1-238	ENST00000523298	RNF220	Q5VTB9	566 aa		5.77	□□□□□ -1.49
CTNNA1-238	ENST00000523298	D2HGDH	Q8N465	521 aa		5.77	□□□□□ -1.49
CTNNA1-238	ENST00000523298	IL17RD	Q8NFM7	739 aa		5.77	□□□□□ -1.49
CTNNA1-238	ENST00000523298	MDGA1	Q8NFP4	955 aa		5.77	□□□□□ -1.49
CTNNA1-238	ENST00000523298	PARD3B	Q8TEW8	1205 aa		5.77	□□□□□ -1.49
CTNNA1-238	ENST00000523298	CPPED1	Q9BRF8	314 aa	Predicted RBP	5.77	□□□□□ -1.49
CTNNA1-238	ENST00000523298	EPC1	Q9H2F5	836 aa		5.77	□□□□□ -1.49
CTNNA1-238	ENST00000523298	FAM204A	Q9H8W3	233 aa		5.77	□□□□□ -1.49
CTNNA1-238	ENST00000523298	MOCS1	Q9NZB8	636 aa		5.77	□□□□□ -1.49
CTNNA1-238	ENST00000523298	FNIP2	Q9P278	1114 aa		5.77	□□□□□ -1.49
CTNNA1-238	ENST00000523298	AGAP1	Q9UPQ3	857 aa		5.77	□□□□□ -1.49

Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms