RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 CDCP2Q5VXM1 449 aa7.4□□□□□ -1.22
VPS13B-211ENST00000522802 ZKSCAN2Q63HK3 967 aa7.4□□□□□ -1.22
VPS13B-211ENST00000522802 LETMD1Q6P1Q0 360 aa7.4□□□□□ -1.22
VPS13B-211ENST00000522802 GIMAP6Q6P9H5 292 aa7.4□□□□□ -1.22
VPS13B-211ENST00000522802 RBM23Q86U06 439 aaKnown RBP7.4□□□□□ -1.22
VPS13B-211ENST00000522802 DHX37Q8IY37 1157 aaKnown RBP7.4□□□□□ -1.22
VPS13B-211ENST00000522802 EFHBQ8N7U6 833 aa7.4□□□□□ -1.22
VPS13B-211ENST00000522802 DNERQ8NFT8 737 aa7.4□□□□□ -1.22
VPS13B-211ENST00000522802 SEPT8Q92599 483 aa7.4□□□□□ -1.22
VPS13B-211ENST00000522802 IL17RAQ96F46 866 aa7.4□□□□□ -1.22
VPS13B-211ENST00000522802 HEXIM2Q96MH2 286 aaKnown RBP7.4□□□□□ -1.22
VPS13B-211ENST00000522802 KATNAL1Q9BW62 490 aa7.4□□□□□ -1.22
VPS13B-211ENST00000522802 PHF7Q9BWX1 381 aaPredicted RBP7.4□□□□□ -1.22
VPS13B-211ENST00000522802 IL17RBQ9NRM6 502 aa7.4□□□□□ -1.22
VPS13B-211ENST00000522802 COL20A1Q9P218 1284 aa7.4□□□□□ -1.22
VPS13B-211ENST00000522802 KLHL3Q9UH77 587 aa7.4□□□□□ -1.22
VPS13B-211ENST00000522802 PPT2Q9UMR5 302 aa7.4□□□□□ -1.22
VPS13B-211ENST00000522802 TTC3P53804 2025 aa7.39□□□□□ -1.23
VPS13B-211ENST00000522802 MYH6P13533 1939 aa7.39□□□□□ -1.23
VPS13B-211ENST00000522802 TGFB1P01137 390 aa7.39□□□□□ -1.23
VPS13B-211ENST00000522802 ITGB1P05556 798 aa7.39□□□□□ -1.23
VPS13B-211ENST00000522802 RB1P06400 928 aa7.39□□□□□ -1.23
VPS13B-211ENST00000522802 HOXC8P31273 242 aa7.39□□□□□ -1.23
VPS13B-211ENST00000522802 GNL2Q13823 731 aaKnown RBP7.39□□□□□ -1.23
VPS13B-211ENST00000522802 DGLUCYQ7Z3D6 616 aa7.39□□□□□ -1.23
VPS13B-211ENST00000522802 FTSJ3Q8IY81 847 aaKnown RBP7.39□□□□□ -1.23
VPS13B-211ENST00000522802 RBBP8NLQ8NC74 664 aaPredicted RBP7.39□□□□□ -1.23
VPS13B-211ENST00000522802 PPTC7Q8NI37 304 aa7.39□□□□□ -1.23
VPS13B-211ENST00000522802 CYB5D2Q8WUJ1 264 aa7.39□□□□□ -1.23
VPS13B-211ENST00000522802 TMEM40Q8WWA1 233 aa7.39□□□□□ -1.23
VPS13B-211ENST00000522802 SUSD6Q92537 303 aa7.39□□□□□ -1.23
VPS13B-211ENST00000522802 KIF1BPQ96EK5 621 aa7.39□□□□□ -1.23
VPS13B-211ENST00000522802 RIPOR3Q96MK2 946 aa7.39□□□□□ -1.23
VPS13B-211ENST00000522802 MIPEPQ99797 713 aa7.39□□□□□ -1.23
VPS13B-211ENST00000522802 CNNM2Q9H8M5 875 aa7.39□□□□□ -1.23
VPS13B-211ENST00000522802 ZNF287Q9HBT7 754 aa7.39□□□□□ -1.23
VPS13B-211ENST00000522802 CDH22Q9UJ99 828 aa7.39□□□□□ -1.23
VPS13B-211ENST00000522802 PLAGL2Q9UPG8 496 aa7.39□□□□□ -1.23
VPS13B-211ENST00000522802 CEP131Q9UPN4 1083 aa7.39□□□□□ -1.23
VPS13B-211ENST00000522802 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.39□□□□□ -1.23
VPS13B-211ENST00000522802 MRPL42Q9Y6G3 142 aaKnown RBP7.39□□□□□ -1.23
VPS13B-211ENST00000522802 OTOGLQ3ZCN5 2332 aa7.39□□□□□ -1.23
VPS13B-211ENST00000522802 FOXP2O15409 715 aa7.38□□□□□ -1.23
VPS13B-211ENST00000522802 HYAL3O43820 417 aaPredicted RBP7.38□□□□□ -1.23
VPS13B-211ENST00000522802 APPP05067 770 aa7.38□□□□□ -1.23
VPS13B-211ENST00000522802 FOSL1P15407 271 aa7.38□□□□□ -1.23
VPS13B-211ENST00000522802 NASPP49321 788 aaPredicted RBP7.38□□□□□ -1.23
VPS13B-211ENST00000522802 PPARAQ07869 468 aa7.38□□□□□ -1.23
VPS13B-211ENST00000522802 USH1GQ495M9 461 aa7.38□□□□□ -1.23
VPS13B-211ENST00000522802 HSP90AB4PQ58FF6 505 aa7.38□□□□□ -1.23
VPS13B-211ENST00000522802 MCTP2Q6DN12 878 aa7.38□□□□□ -1.23
VPS13B-211ENST00000522802 OVOS1Q6IE37 1185 aa7.38□□□□□ -1.23
VPS13B-211ENST00000522802 ZSCAN25Q6NSZ9 544 aa7.38□□□□□ -1.23
VPS13B-211ENST00000522802 BTNL9Q6UXG8 535 aa7.38□□□□□ -1.23
VPS13B-211ENST00000522802 KREMEN2Q8NCW0 462 aa7.38□□□□□ -1.23
VPS13B-211ENST00000522802 DNAJB8Q8NHS0 232 aa7.38□□□□□ -1.23
VPS13B-211ENST00000522802 DCAF4Q8WV16 495 aa7.38□□□□□ -1.23
VPS13B-211ENST00000522802 APPBP2Q92624 585 aa7.38□□□□□ -1.23
VPS13B-211ENST00000522802 CCDC74BQ96LY2 380 aa7.38□□□□□ -1.23
VPS13B-211ENST00000522802 FERD3LQ96RJ6 166 aa7.38□□□□□ -1.23
VPS13B-211ENST00000522802 MPHOSPH6Q99547 160 aaKnown RBP7.38□□□□□ -1.23
VPS13B-211ENST00000522802 RWDD3Q9Y3V2 267 aa7.38□□□□□ -1.23
VPS13B-211ENST00000522802 DENND4AQ7Z401 1863 aa7.37□□□□□ -1.23
VPS13B-211ENST00000522802 WDR19Q8NEZ3 1342 aa7.37□□□□□ -1.23
VPS13B-211ENST00000522802 C17orf102A2RUQ5 167 aa7.37□□□□□ -1.23
VPS13B-211ENST00000522802 TSPY2A6NKD2 308 aa7.37□□□□□ -1.23
VPS13B-211ENST00000522802 RGS13O14921 159 aa7.37□□□□□ -1.23
VPS13B-211ENST00000522802 PER2O15055 1255 aa7.37□□□□□ -1.23
VPS13B-211ENST00000522802 SMIM10L2AP0DMW4 78 aa7.37□□□□□ -1.23
VPS13B-211ENST00000522802 SMIM10L2BP0DMW5 78 aa7.37□□□□□ -1.23
VPS13B-211ENST00000522802 GHRP10912 638 aa7.37□□□□□ -1.23
VPS13B-211ENST00000522802 ATF7P17544 494 aaPredicted RBP7.37□□□□□ -1.23
VPS13B-211ENST00000522802 NOVP48745 357 aa7.37□□□□□ -1.23
VPS13B-211ENST00000522802 BTG3Q14201 252 aaPredicted RBP7.37□□□□□ -1.23
VPS13B-211ENST00000522802 HSDL1Q3SXM5 330 aa7.37□□□□□ -1.23
VPS13B-211ENST00000522802 ARSHQ5FYA8 562 aa7.37□□□□□ -1.23
VPS13B-211ENST00000522802 TSHZ3Q63HK5 1081 aa7.37□□□□□ -1.23
VPS13B-211ENST00000522802 CWF19L1Q69YN2 538 aaKnown RBP7.37□□□□□ -1.23
VPS13B-211ENST00000522802 NLRC3Q7RTR2 1065 aa7.37□□□□□ -1.23
VPS13B-211ENST00000522802 SIRT2Q8IXJ6 389 aa7.37□□□□□ -1.23
VPS13B-211ENST00000522802 KIAA2013Q8IYS2 634 aa7.37□□□□□ -1.23
VPS13B-211ENST00000522802 IFNL3Q8IZI9 196 aa7.37□□□□□ -1.23
VPS13B-211ENST00000522802 POF1BQ8WVV4 589 aa7.37□□□□□ -1.23
VPS13B-211ENST00000522802 LINC01599Q8WXQ3 324 aa7.37□□□□□ -1.23
VPS13B-211ENST00000522802 TBC1D5Q92609 795 aa7.37□□□□□ -1.23
VPS13B-211ENST00000522802 ATP6V0A1Q93050 837 aa7.37□□□□□ -1.23
VPS13B-211ENST00000522802 ZNF689Q96CS4 500 aaPredicted RBP7.37□□□□□ -1.23
VPS13B-211ENST00000522802 TAAR1Q96RJ0 339 aa7.37□□□□□ -1.23
VPS13B-211ENST00000522802 C16orf70Q9BSU1 422 aa7.37□□□□□ -1.23
VPS13B-211ENST00000522802 APOL5Q9BWW9 433 aa7.37□□□□□ -1.23
VPS13B-211ENST00000522802 CPVLQ9H3G5 476 aa7.37□□□□□ -1.23
VPS13B-211ENST00000522802 MYO10Q9HD67 2058 aa7.37□□□□□ -1.23
VPS13B-211ENST00000522802 LOXHD1Q8IVV2 1947 aa7.37□□□□□ -1.23
VPS13B-211ENST00000522802 CYP26A1O43174 497 aa7.36□□□□□ -1.23
VPS13B-211ENST00000522802 DGKIO75912 1065 aa7.36□□□□□ -1.23
VPS13B-211ENST00000522802 PDHBP11177 359 aa7.36□□□□□ -1.23
VPS13B-211ENST00000522802 NME1P15531 152 aaKnown RBP7.36□□□□□ -1.23
VPS13B-211ENST00000522802 GIPRP48546 466 aa7.36□□□□□ -1.23
VPS13B-211ENST00000522802 GATMP50440 423 aa7.36□□□□□ -1.23
VPS13B-211ENST00000522802 PAN2Q504Q3 1202 aaKnown RBP7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms