RNA–Protein interactions for RNA: ENST00000522730.1

CTNNA1-235, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-235ENST00000522730 PPM1LQ5SGD2 360 aa11.22□□□□□ -0.61
CTNNA1-235ENST00000522730 ZNF318Q5VUA4 2279 aa11.22□□□□□ -0.61
CTNNA1-235ENST00000522730 TAS1R3Q7RTX0 852 aa11.22□□□□□ -0.61
CTNNA1-235ENST00000522730 GRASPQ7Z6J2 395 aaPredicted RBP11.22□□□□□ -0.61
CTNNA1-235ENST00000522730 HDAC7Q8WUI4 952 aa11.22□□□□□ -0.61
CTNNA1-235ENST00000522730 BICD1Q96G01 975 aa11.22□□□□□ -0.61
CTNNA1-235ENST00000522730 PPP1R10Q96QC0 940 aaKnown RBP11.22□□□□□ -0.61
CTNNA1-235ENST00000522730 ZHX3Q9H4I2 956 aa11.22□□□□□ -0.61
CTNNA1-235ENST00000522730 TOPORSQ9NS56 1045 aaPredicted RBP11.22□□□□□ -0.61
CTNNA1-235ENST00000522730 ZMYM2Q9UBW7 1377 aa11.21□□□□□ -0.61
CTNNA1-235ENST00000522730 PHLPP2Q6ZVD8 1323 aa11.21□□□□□ -0.61
CTNNA1-235ENST00000522730 TRAPPC3O43617 180 aa11.21□□□□□ -0.61
CTNNA1-235ENST00000522730 ZMYND10O75800 440 aa11.21□□□□□ -0.61
CTNNA1-235ENST00000522730 C8AP07357 584 aa11.21□□□□□ -0.61
CTNNA1-235ENST00000522730 MCF2P10911 925 aa11.21□□□□□ -0.61
CTNNA1-235ENST00000522730 PYGBP11216 843 aa11.21□□□□□ -0.61
CTNNA1-235ENST00000522730 PLS3P13797 630 aa11.21□□□□□ -0.61
CTNNA1-235ENST00000522730 RFX1P22670 979 aa11.21□□□□□ -0.61
CTNNA1-235ENST00000522730 FSHRP23945 695 aa11.21□□□□□ -0.61
CTNNA1-235ENST00000522730 TKTP29401 623 aaKnown RBP11.21□□□□□ -0.61
CTNNA1-235ENST00000522730 BRCC3P46736 316 aa11.21□□□□□ -0.61
CTNNA1-235ENST00000522730 SPAG1Q07617 926 aa11.21□□□□□ -0.61
CTNNA1-235ENST00000522730 TCF15Q12870 199 aa11.21□□□□□ -0.61
CTNNA1-235ENST00000522730 MAPK7Q13164 816 aa11.21□□□□□ -0.61
CTNNA1-235ENST00000522730 UPP1Q16831 310 aa11.21□□□□□ -0.61
CTNNA1-235ENST00000522730 AXDND1Q5T1B0 1012 aaPredicted RBP11.21□□□□□ -0.61
CTNNA1-235ENST00000522730 MPZL3Q6UWV2 235 aa11.21□□□□□ -0.61
CTNNA1-235ENST00000522730 CYP26C1Q6V0L0 522 aa11.21□□□□□ -0.61
CTNNA1-235ENST00000522730 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.21□□□□□ -0.61
CTNNA1-235ENST00000522730 SIX5Q8N196 739 aa11.21□□□□□ -0.61
CTNNA1-235ENST00000522730 TMEM105Q8N8V8 129 aa11.21□□□□□ -0.61
CTNNA1-235ENST00000522730 SYT2Q8N9I0 419 aaPredicted RBP11.21□□□□□ -0.61
CTNNA1-235ENST00000522730 PIK3R5Q8WYR1 880 aa11.21□□□□□ -0.61
CTNNA1-235ENST00000522730 C18orf25Q96B23 403 aaPredicted RBP11.21□□□□□ -0.61
CTNNA1-235ENST00000522730 CALML4Q96GE6 196 aa11.21□□□□□ -0.61
CTNNA1-235ENST00000522730 UROC1Q96N76 676 aa11.21□□□□□ -0.61
CTNNA1-235ENST00000522730 ZMAT2Q96NC0 199 aaKnown RBP11.21□□□□□ -0.61
CTNNA1-235ENST00000522730 PRRX2Q99811 253 aa11.21□□□□□ -0.61
CTNNA1-235ENST00000522730 PTPRHQ9HD43 1115 aa11.21□□□□□ -0.61
CTNNA1-235ENST00000522730 ZDHHC7Q9NXF8 308 aa11.21□□□□□ -0.61
CTNNA1-235ENST00000522730 IGSF9Q9P2J2 1179 aa11.21□□□□□ -0.61
CTNNA1-235ENST00000522730 ARHGAP28Q9P2N2 729 aa11.21□□□□□ -0.61
CTNNA1-235ENST00000522730 CDY1Q9Y6F8 540 aa11.21□□□□□ -0.61
CTNNA1-235ENST00000522730 PODXLO00592 558 aa11.2□□□□□ -0.62
CTNNA1-235ENST00000522730 CLDN3O15551 220 aa11.2□□□□□ -0.62
CTNNA1-235ENST00000522730 FGFR3P22607 806 aa11.2□□□□□ -0.62
CTNNA1-235ENST00000522730 GUCY2CP25092 1073 aa11.2□□□□□ -0.62
CTNNA1-235ENST00000522730 SLC12A3P55017 1021 aa11.2□□□□□ -0.62
CTNNA1-235ENST00000522730 SOX4Q06945 474 aaPredicted RBP11.2□□□□□ -0.62
CTNNA1-235ENST00000522730 ARSHQ5FYA8 562 aa11.2□□□□□ -0.62
CTNNA1-235ENST00000522730 ASTLQ6HA08 431 aaPredicted RBP11.2□□□□□ -0.62
CTNNA1-235ENST00000522730 PDXDC1Q6P996 788 aa11.2□□□□□ -0.62
CTNNA1-235ENST00000522730 RSPO2Q6UXX9 243 aaPredicted RBP11.2□□□□□ -0.62
CTNNA1-235ENST00000522730 GPBP1Q86WP2 473 aa11.2□□□□□ -0.62
CTNNA1-235ENST00000522730 GPR65Q8IYL9 337 aa11.2□□□□□ -0.62
CTNNA1-235ENST00000522730 SLC44A3Q8N4M1 653 aa11.2□□□□□ -0.62
CTNNA1-235ENST00000522730 MYCT1Q8N699 235 aa11.2□□□□□ -0.62
CTNNA1-235ENST00000522730 C3orf58Q8NDZ4 430 aa11.2□□□□□ -0.62
CTNNA1-235ENST00000522730 SLC7A14Q8TBB6 771 aa11.2□□□□□ -0.62
CTNNA1-235ENST00000522730 TIPINQ9BVW5 301 aa11.2□□□□□ -0.62
CTNNA1-235ENST00000522730 C17orf75Q9HAS0 396 aa11.2□□□□□ -0.62
CTNNA1-235ENST00000522730 SLC38A7Q9NVC3 462 aa11.2□□□□□ -0.62
CTNNA1-235ENST00000522730 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.2□□□□□ -0.62
CTNNA1-235ENST00000522730 KCNG1Q9UIX4 513 aa11.2□□□□□ -0.62
CTNNA1-235ENST00000522730 CA14Q9ULX7 337 aa11.2□□□□□ -0.62
CTNNA1-235ENST00000522730 NUB1Q9Y5A7 615 aa11.2□□□□□ -0.62
CTNNA1-235ENST00000522730 PI15O43692 258 aa11.19□□□□□ -0.62
CTNNA1-235ENST00000522730 XYLBO75191 536 aa11.19□□□□□ -0.62
CTNNA1-235ENST00000522730 TOM1L1O75674 476 aa11.19□□□□□ -0.62
CTNNA1-235ENST00000522730 FAM13AO94988 1023 aa11.19□□□□□ -0.62
CTNNA1-235ENST00000522730 MAPTP10636 758 aaKnown RBP11.19□□□□□ -0.62
CTNNA1-235ENST00000522730 LAMP2P13473 410 aa11.19□□□□□ -0.62
CTNNA1-235ENST00000522730 MARCKSP29966 332 aaPredicted RBP11.19□□□□□ -0.62
CTNNA1-235ENST00000522730 ELF1P32519 619 aa11.19□□□□□ -0.62
CTNNA1-235ENST00000522730 CEBPZQ03701 1054 aaKnown RBP11.19□□□□□ -0.62
CTNNA1-235ENST00000522730 GRIN1Q05586 938 aa11.19□□□□□ -0.62
CTNNA1-235ENST00000522730 RAB33AQ14088 237 aa11.19□□□□□ -0.62
CTNNA1-235ENST00000522730 MCM6Q14566 821 aa11.19□□□□□ -0.62
CTNNA1-235ENST00000522730 KARSQ15046 597 aaKnown RBP11.19□□□□□ -0.62
CTNNA1-235ENST00000522730 SF3A1Q15459 793 aaKnown RBP11.19□□□□□ -0.62
CTNNA1-235ENST00000522730 SPECC1Q5M775 1068 aa11.19□□□□□ -0.62
CTNNA1-235ENST00000522730 HYIQ5T013 277 aa11.19□□□□□ -0.62
CTNNA1-235ENST00000522730 ARL6IP4Q66PJ3 421 aaKnown RBP11.19□□□□□ -0.62
CTNNA1-235ENST00000522730 CD300LGQ6UXG3 332 aa11.19□□□□□ -0.62
CTNNA1-235ENST00000522730 ALKAL1Q6UXT8 129 aa11.19□□□□□ -0.62
CTNNA1-235ENST00000522730 ANKS3Q6ZW76 656 aa11.19□□□□□ -0.62
CTNNA1-235ENST00000522730 TMEM130Q8N3G9 435 aa11.19□□□□□ -0.62
CTNNA1-235ENST00000522730 TMEM161BQ8NDZ6 487 aa11.19□□□□□ -0.62
CTNNA1-235ENST00000522730 SPIRE2Q8WWL2 714 aa11.19□□□□□ -0.62
CTNNA1-235ENST00000522730 DDX27Q96GQ7 796 aaKnown RBP11.19□□□□□ -0.62
CTNNA1-235ENST00000522730 SNX27Q96L92 541 aa11.19□□□□□ -0.62
CTNNA1-235ENST00000522730 NTPCRQ9BSD7 190 aaKnown RBP11.19□□□□□ -0.62
CTNNA1-235ENST00000522730 HCFC1R1Q9NWW0 138 aa11.19□□□□□ -0.62
CTNNA1-235ENST00000522730 EPS15L1Q9UBC2 864 aa11.19□□□□□ -0.62
CTNNA1-235ENST00000522730 FBXW11Q9UKB1 542 aa11.19□□□□□ -0.62
CTNNA1-235ENST00000522730 PLXNA3P51805 1871 aa11.19□□□□□ -0.62
CTNNA1-235ENST00000522730 PRRG1O14668 218 aa11.18□□□□□ -0.62
CTNNA1-235ENST00000522730 GALR2O43603 387 aaPredicted RBP11.18□□□□□ -0.62
CTNNA1-235ENST00000522730 C1RP00736 705 aa11.18□□□□□ -0.62
CTNNA1-235ENST00000522730 HNRNPA1P09651 372 aaKnown RBP eCLIP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms