RNA–Protein interactions for RNA: ENST00000522230.1

CKS1BP7-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 7, humanhuman

BASIC

Gene CKS1BP7, Length 235 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP7-201ENST00000522230 ATP2C1P98194 919 aaPredicted RBP3.33□□□□□ -1.88
CKS1BP7-201ENST00000522230 EXOSC9Q06265 439 aaKnown RBP3.33□□□□□ -1.88
CKS1BP7-201ENST00000522230 GTF2H3Q13889 308 aa3.33□□□□□ -1.88
CKS1BP7-201ENST00000522230 EIF4HQ15056 248 aaKnown RBP3.33□□□□□ -1.88
CKS1BP7-201ENST00000522230 KRT24Q2M2I5 525 aa3.33□□□□□ -1.88
CKS1BP7-201ENST00000522230 ATAT1Q5SQI0 421 aa3.33□□□□□ -1.88
CKS1BP7-201ENST00000522230 XP32Q5T750 250 aa3.33□□□□□ -1.88
CKS1BP7-201ENST00000522230 TRIM68Q6AZZ1 485 aa3.33□□□□□ -1.88
CKS1BP7-201ENST00000522230 OGFOD2Q6N063 350 aa3.33□□□□□ -1.88
CKS1BP7-201ENST00000522230 Q6ZUG5 572 aa3.33□□□□□ -1.88
CKS1BP7-201ENST00000522230 USP45Q70EL2 814 aa3.33□□□□□ -1.88
CKS1BP7-201ENST00000522230 MCM10Q7L590 875 aa3.33□□□□□ -1.88
CKS1BP7-201ENST00000522230 OVCH2Q7RTZ1 564 aa3.33□□□□□ -1.88
CKS1BP7-201ENST00000522230 KRT28Q7Z3Y7 464 aa3.33□□□□□ -1.88
CKS1BP7-201ENST00000522230 DGKHQ86XP1 1220 aa3.33□□□□□ -1.88
CKS1BP7-201ENST00000522230 CCAR1Q8IX12 1150 aaKnown RBP3.33□□□□□ -1.88
CKS1BP7-201ENST00000522230 CARFQ8N187 725 aa3.33□□□□□ -1.88
CKS1BP7-201ENST00000522230 REPS2Q8NFH8 660 aa3.33□□□□□ -1.88
CKS1BP7-201ENST00000522230 PPP1R14CQ8TAE6 165 aa3.33□□□□□ -1.88
CKS1BP7-201ENST00000522230 RSAD2Q8WXG1 361 aa3.33□□□□□ -1.88
CKS1BP7-201ENST00000522230 LRRC59Q96AG4 307 aaKnown RBP3.33□□□□□ -1.88
CKS1BP7-201ENST00000522230 DACT3Q96B18 629 aaPredicted RBP3.33□□□□□ -1.88
CKS1BP7-201ENST00000522230 MVB12AQ96EY5 273 aa3.33□□□□□ -1.88
CKS1BP7-201ENST00000522230 FAM84AQ96KN4 292 aa3.33□□□□□ -1.88
CKS1BP7-201ENST00000522230 UIMC1Q96RL1 719 aa3.33□□□□□ -1.88
CKS1BP7-201ENST00000522230 MAP3K14Q99558 947 aa3.33□□□□□ -1.88
CKS1BP7-201ENST00000522230 NUP88Q99567 741 aaPredicted RBP3.33□□□□□ -1.88
CKS1BP7-201ENST00000522230 CD320Q9NPF0 282 aa3.33□□□□□ -1.88
CKS1BP7-201ENST00000522230 GOLGA6AQ9NYA3 693 aa3.33□□□□□ -1.88
CKS1BP7-201ENST00000522230 MIS18AQ9NYP9 233 aa3.33□□□□□ -1.88
CKS1BP7-201ENST00000522230 NTMQ9P121 344 aa3.33□□□□□ -1.88
CKS1BP7-201ENST00000522230 SIK3Q9Y2K2 1263 aa3.33□□□□□ -1.88
CKS1BP7-201ENST00000522230 FRMPD2Q68DX3 1309 aaPredicted RBP3.33□□□□□ -1.88
CKS1BP7-201ENST00000522230 ADGRL3Q9HAR2 1447 aa3.33□□□□□ -1.88
CKS1BP7-201ENST00000522230 IQSEC2Q5JU85 1478 aa3.33□□□□□ -1.88
CKS1BP7-201ENST00000522230 LRRC7Q96NW7 1537 aa3.33□□□□□ -1.88
CKS1BP7-201ENST00000522230 ADGRB2O60241 1585 aa3.33□□□□□ -1.88
CKS1BP7-201ENST00000522230 TOPAZ1Q8N9V7 1692 aa3.33□□□□□ -1.88
CKS1BP7-201ENST00000522230 MON2Q7Z3U7 1717 aa3.33□□□□□ -1.88
CKS1BP7-201ENST00000522230 PEAK1Q9H792 1746 aa3.33□□□□□ -1.88
CKS1BP7-201ENST00000522230 FMN2Q9NZ56 1722 aa3.33□□□□□ -1.88
CKS1BP7-201ENST00000522230 ANKRD26Q9UPS8 1709 aa3.33□□□□□ -1.88
CKS1BP7-201ENST00000522230 AKAP12Q02952 1782 aa3.33□□□□□ -1.88
CKS1BP7-201ENST00000522230 PEX14O75381 377 aa3.32□□□□□ -1.88
CKS1BP7-201ENST00000522230 ALDH1A2O94788 518 aa3.32□□□□□ -1.88
CKS1BP7-201ENST00000522230 FARP2O94887 1054 aaPredicted RBP3.32□□□□□ -1.88
CKS1BP7-201ENST00000522230 LTA4HP09960 611 aaKnown RBP3.32□□□□□ -1.88
CKS1BP7-201ENST00000522230 AKAP5P24588 427 aa3.32□□□□□ -1.88
CKS1BP7-201ENST00000522230 MEOX1P50221 254 aa3.32□□□□□ -1.88
CKS1BP7-201ENST00000522230 AFF3P51826 1226 aaKnown RBP3.32□□□□□ -1.88
CKS1BP7-201ENST00000522230 USP14P54578 494 aa3.32□□□□□ -1.88
CKS1BP7-201ENST00000522230 DSC2Q02487 901 aa3.32□□□□□ -1.88
CKS1BP7-201ENST00000522230 TARDBPQ13148 414 aaKnown RBP eCLIP3.32□□□□□ -1.88
CKS1BP7-201ENST00000522230 ANO4Q32M45 955 aa3.32□□□□□ -1.88
CKS1BP7-201ENST00000522230 PGS1Q32NB8 556 aa3.32□□□□□ -1.88
CKS1BP7-201ENST00000522230 SYCP2LQ5T4T6 812 aa3.32□□□□□ -1.88
CKS1BP7-201ENST00000522230 KLHDC10Q6PID8 442 aa3.32□□□□□ -1.88
CKS1BP7-201ENST00000522230 CLEC14AQ86T13 490 aa3.32□□□□□ -1.88
CKS1BP7-201ENST00000522230 RHOT1Q8IXI2 618 aa3.32□□□□□ -1.88
CKS1BP7-201ENST00000522230 IFNL2Q8IZJ0 200 aa3.32□□□□□ -1.88
CKS1BP7-201ENST00000522230 PRR18Q8N4B5 295 aa3.32□□□□□ -1.88
CKS1BP7-201ENST00000522230 ZGPATQ8N5A5 531 aaKnown RBP3.32□□□□□ -1.88
CKS1BP7-201ENST00000522230 CAMKK1Q8N5S9 505 aa3.32□□□□□ -1.88
CKS1BP7-201ENST00000522230 LILRA3Q8N6C8 439 aaPredicted RBP3.32□□□□□ -1.88
CKS1BP7-201ENST00000522230 MARCH10Q8NA82 808 aaPredicted RBP3.32□□□□□ -1.88
CKS1BP7-201ENST00000522230 GPR156Q8NFN8 814 aa3.32□□□□□ -1.88
CKS1BP7-201ENST00000522230 CCHCR1Q8TD31 782 aa3.32□□□□□ -1.88
CKS1BP7-201ENST00000522230 ADAMTS17Q8TE56 1095 aa3.32□□□□□ -1.88
CKS1BP7-201ENST00000522230 STON2Q8WXE9 905 aa3.32□□□□□ -1.88
CKS1BP7-201ENST00000522230 SSH1Q8WYL5 1049 aa3.32□□□□□ -1.88
CKS1BP7-201ENST00000522230 HOXB13Q92826 284 aaPredicted RBP3.32□□□□□ -1.88
CKS1BP7-201ENST00000522230 MBD6Q96DN6 1003 aa3.32□□□□□ -1.88
CKS1BP7-201ENST00000522230 RPL10LQ96L21 214 aaKnown RBP3.32□□□□□ -1.88
CKS1BP7-201ENST00000522230 NT5C1BQ96P26 610 aa3.32□□□□□ -1.88
CKS1BP7-201ENST00000522230 PLEKHF1Q96S99 279 aa3.32□□□□□ -1.88
CKS1BP7-201ENST00000522230 PDCD2LQ9BRP1 358 aa3.32□□□□□ -1.88
CKS1BP7-201ENST00000522230 LRFN3Q9BTN0 628 aa3.32□□□□□ -1.88
CKS1BP7-201ENST00000522230 KATNBL1Q9H079 304 aa3.32□□□□□ -1.88
CKS1BP7-201ENST00000522230 TMEM168Q9H0V1 697 aa3.32□□□□□ -1.88
CKS1BP7-201ENST00000522230 ARNT2Q9HBZ2 717 aa3.32□□□□□ -1.88
CKS1BP7-201ENST00000522230 RBM12Q9NTZ6 932 aaKnown RBP3.32□□□□□ -1.88
CKS1BP7-201ENST00000522230 GEMIN8Q9NWZ8 242 aaKnown RBP3.32□□□□□ -1.88
CKS1BP7-201ENST00000522230 NCDNQ9UBB6 729 aa3.32□□□□□ -1.88
CKS1BP7-201ENST00000522230 STAP2Q9UGK3 403 aa3.32□□□□□ -1.88
CKS1BP7-201ENST00000522230 FBXO10Q9UK96 956 aa3.32□□□□□ -1.88
CKS1BP7-201ENST00000522230 RNF114Q9Y508 228 aa3.32□□□□□ -1.88
CKS1BP7-201ENST00000522230 PCDHB1Q9Y5F3 818 aa3.32□□□□□ -1.88
CKS1BP7-201ENST00000522230 ZNF521Q96K83 1311 aa3.32□□□□□ -1.88
CKS1BP7-201ENST00000522230 FANCIQ9NVI1 1328 aa3.32□□□□□ -1.88
CKS1BP7-201ENST00000522230 OVOS2A0A0J9YW53 1432 aa3.32□□□□□ -1.88
CKS1BP7-201ENST00000522230 OVOS2Q6IE36 1432 aa3.32□□□□□ -1.88
CKS1BP7-201ENST00000522230 STRCP1A6NGW2 1772 aa3.32□□□□□ -1.88
CKS1BP7-201ENST00000522230 CHD2O14647 1828 aaKnown RBP3.32□□□□□ -1.88
CKS1BP7-201ENST00000522230 PIK3C2AO00443 1686 aa3.31□□□□□ -1.88
CKS1BP7-201ENST00000522230 NRKQ7Z2Y5 1582 aa3.31□□□□□ -1.88
CKS1BP7-201ENST00000522230 LMTK3Q96Q04 1460 aa3.31□□□□□ -1.88
CKS1BP7-201ENST00000522230 CDK12Q9NYV4 1490 aaPredicted RBP3.31□□□□□ -1.88
CKS1BP7-201ENST00000522230 ANKARQ7Z5J8 1434 aa3.31□□□□□ -1.88
CKS1BP7-201ENST00000522230 INSRP06213 1382 aa3.31□□□□□ -1.88
CKS1BP7-201ENST00000522230 RPTORQ8N122 1335 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms