RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 MCUQ8NE86 351 aa17.12■□□□□ 0.33
USP42-207ENST00000521713 POLR1AO95602 1720 aaPredicted RBP17.12■□□□□ 0.33
USP42-207ENST00000521713 H3BRJ5 948 aa17.11■□□□□ 0.33
USP42-207ENST00000521713 WNT10BO00744 389 aa17.11■□□□□ 0.33
USP42-207ENST00000521713 RAD51Q06609 339 aa17.11■□□□□ 0.33
USP42-207ENST00000521713 LMBRD2Q68DH5 695 aaPredicted RBP17.11■□□□□ 0.33
USP42-207ENST00000521713 ARRDC4Q8NCT1 418 aa17.11■□□□□ 0.33
USP42-207ENST00000521713 PIP4K2CQ8TBX8 421 aa17.11■□□□□ 0.33
USP42-207ENST00000521713 OPTNQ96CV9 577 aa17.11■□□□□ 0.33
USP42-207ENST00000521713 TRAIPQ9BWF2 469 aa17.11■□□□□ 0.33
USP42-207ENST00000521713 STK33Q9BYT3 514 aa17.11■□□□□ 0.33
USP42-207ENST00000521713 ADGRG1Q9Y653 693 aa17.11■□□□□ 0.33
USP42-207ENST00000521713 TRPA1O75762 1119 aa17.11■□□□□ 0.33
USP42-207ENST00000521713 CCDC144BQ3MJ40 725 aa17.11■□□□□ 0.33
USP42-207ENST00000521713 TEX9Q8N6V9 391 aa17.11■□□□□ 0.33
USP42-207ENST00000521713 RFFLQ8WZ73 363 aa17.11■□□□□ 0.33
USP42-207ENST00000521713 FGD4Q96M96 766 aa17.11■□□□□ 0.33
USP42-207ENST00000521713 MAGEB5Q9BZ81 275 aa17.11■□□□□ 0.33
USP42-207ENST00000521713 APEX2Q9UBZ4 518 aa17.11■□□□□ 0.33
USP42-207ENST00000521713 CAPN11Q9UMQ6 739 aa17.11■□□□□ 0.33
USP42-207ENST00000521713 TEX33O43247 280 aa17.11■□□□□ 0.33
USP42-207ENST00000521713 CTDNEP1O95476 244 aa17.11■□□□□ 0.33
USP42-207ENST00000521713 PCSK1P29120 753 aa17.11■□□□□ 0.33
USP42-207ENST00000521713 FMO5P49326 533 aa17.11■□□□□ 0.33
USP42-207ENST00000521713 SLC26A2P50443 739 aa17.11■□□□□ 0.33
USP42-207ENST00000521713 ARL4CP56559 192 aa17.11■□□□□ 0.33
USP42-207ENST00000521713 USP50Q70EL3 339 aaPredicted RBP17.11■□□□□ 0.33
USP42-207ENST00000521713 GLYCTKQ8IVS8 523 aa17.11■□□□□ 0.33
USP42-207ENST00000521713 AGPAT1Q99943 283 aa17.11■□□□□ 0.33
USP42-207ENST00000521713 ZCCHC17Q9NP64 241 aaKnown RBP17.11■□□□□ 0.33
USP42-207ENST00000521713 PCSK1NQ9UHG2 260 aa17.11■□□□□ 0.33
USP42-207ENST00000521713 HEY1Q9Y5J3 304 aa17.11■□□□□ 0.33
USP42-207ENST00000521713 ARHGEF28Q8N1W1 1705 aaKnown RBP17.11■□□□□ 0.33
USP42-207ENST00000521713 PYGBP11216 843 aa17.11■□□□□ 0.33
USP42-207ENST00000521713 BCAR1P56945 870 aa17.11■□□□□ 0.33
USP42-207ENST00000521713 ACTN3Q08043 901 aaPredicted RBP17.11■□□□□ 0.33
USP42-207ENST00000521713 STK4Q13043 487 aa17.11■□□□□ 0.33
USP42-207ENST00000521713 GRAMD1BQ3KR37 738 aa17.11■□□□□ 0.33
USP42-207ENST00000521713 LRRC71Q8N4P6 559 aa17.11■□□□□ 0.33
USP42-207ENST00000521713 PCSK9Q8NBP7 692 aaKnown RBP17.11■□□□□ 0.33
USP42-207ENST00000521713 KIFC3Q9BVG8 833 aa17.11■□□□□ 0.33
USP42-207ENST00000521713 UPF3AQ9H1J1 476 aaKnown RBP17.11■□□□□ 0.33
USP42-207ENST00000521713 KIF1AQ12756 1690 aa17.11■□□□□ 0.33
USP42-207ENST00000521713 LOC102724159A0A0B4J2E5 919 aa17.1■□□□□ 0.33
USP42-207ENST00000521713 SLCO1A2P46721 670 aa17.1■□□□□ 0.33
USP42-207ENST00000521713 PWP2Q15269 919 aaKnown RBP17.1■□□□□ 0.33
USP42-207ENST00000521713 MYLK4Q86YV6 388 aaPredicted RBP17.1■□□□□ 0.33
USP42-207ENST00000521713 WNT8AQ9H1J5 351 aa17.1■□□□□ 0.33
USP42-207ENST00000521713 IL25Q9H293 177 aa17.1■□□□□ 0.33
USP42-207ENST00000521713 MRPL40Q9NQ50 206 aaKnown RBP17.1■□□□□ 0.33
USP42-207ENST00000521713 NPEPPSP55786 919 aa17.1■□□□□ 0.33
USP42-207ENST00000521713 MDM2Q00987 491 aaPredicted RBP17.1■□□□□ 0.33
USP42-207ENST00000521713 CATSPER3Q86XQ3 398 aa17.1■□□□□ 0.33
USP42-207ENST00000521713 C18orf8Q96DM3 657 aa17.1■□□□□ 0.33
USP42-207ENST00000521713 MAGED2Q9UNF1 606 aaPredicted RBP17.1■□□□□ 0.33
USP42-207ENST00000521713 P4HA2O15460 535 aa17.1■□□□□ 0.33
USP42-207ENST00000521713 PPP1R37O75864 691 aa17.1■□□□□ 0.33
USP42-207ENST00000521713 SEC23AQ15436 765 aa17.1■□□□□ 0.33
USP42-207ENST00000521713 SV2CQ496J9 727 aa17.1■□□□□ 0.33
USP42-207ENST00000521713 BEND6Q5SZJ8 279 aaPredicted RBP17.1■□□□□ 0.33
USP42-207ENST00000521713 DCP1BQ8IZD4 617 aaKnown RBP17.1■□□□□ 0.33
USP42-207ENST00000521713 FSD1LQ9BXM9 530 aa17.1■□□□□ 0.33
USP42-207ENST00000521713 TRPV6Q9H1D0 765 aa17.1■□□□□ 0.33
USP42-207ENST00000521713 OCA2Q04671 838 aa17.1■□□□□ 0.33
USP42-207ENST00000521713 ITPRIPL1Q6GPH6 555 aa17.1■□□□□ 0.33
USP42-207ENST00000521713 HPS3Q969F9 1004 aa17.1■□□□□ 0.33
USP42-207ENST00000521713 MRIQ9BWK5 157 aa17.1■□□□□ 0.33
USP42-207ENST00000521713 STK25O00506 426 aa17.09■□□□□ 0.33
USP42-207ENST00000521713 PAPOLAP51003 745 aaKnown RBP17.09■□□□□ 0.33
USP42-207ENST00000521713 TEDDM1Q5T9Z0 273 aa17.09■□□□□ 0.33
USP42-207ENST00000521713 MAP1SQ66K74 1059 aaPredicted RBP17.09■□□□□ 0.33
USP42-207ENST00000521713 C15orf52Q6ZUT6 534 aaKnown RBP17.09■□□□□ 0.33
USP42-207ENST00000521713 DNERQ8NFT8 737 aa17.09■□□□□ 0.33
USP42-207ENST00000521713 CEP70Q8NHQ1 597 aa17.09■□□□□ 0.33
USP42-207ENST00000521713 TRIM15Q9C019 465 aa17.09■□□□□ 0.33
USP42-207ENST00000521713 NKRFO15226 690 aaKnown RBP eCLIP17.09■□□□□ 0.33
USP42-207ENST00000521713 STRNO43815 780 aa17.09■□□□□ 0.33
USP42-207ENST00000521713 EXTL3O43909 919 aa17.09■□□□□ 0.33
USP42-207ENST00000521713 KPNA6O60684 536 aa17.09■□□□□ 0.33
USP42-207ENST00000521713 TFRCP02786 760 aaKnown RBP17.09■□□□□ 0.33
USP42-207ENST00000521713 GRIK1P39086 918 aa17.09■□□□□ 0.33
USP42-207ENST00000521713 NLRP11P59045 1033 aaKnown RBP17.09■□□□□ 0.33
USP42-207ENST00000521713 AP2B1P63010 937 aa17.09■□□□□ 0.33
USP42-207ENST00000521713 TMEM62Q0P6H9 643 aa17.09■□□□□ 0.33
USP42-207ENST00000521713 IFT43Q96FT9 208 aa17.09■□□□□ 0.33
USP42-207ENST00000521713 HEMGNQ9BXL5 484 aa17.09■□□□□ 0.33
USP42-207ENST00000521713 SPATC1LQ9H0A9 340 aa17.09■□□□□ 0.33
USP42-207ENST00000521713 EPN3Q9H201 632 aa17.09■□□□□ 0.33
USP42-207ENST00000521713 MRPL46Q9H2W6 279 aaKnown RBP17.09■□□□□ 0.33
USP42-207ENST00000521713 MAP2P11137 1827 aaKnown RBP17.09■□□□□ 0.33
USP42-207ENST00000521713 CYP26A1O43174 497 aa17.09■□□□□ 0.33
USP42-207ENST00000521713 MYBP10242 640 aa17.09■□□□□ 0.33
USP42-207ENST00000521713 DCAF4L1Q3SXM0 396 aa17.09■□□□□ 0.33
USP42-207ENST00000521713 KLC3Q6P597 504 aa17.09■□□□□ 0.33
USP42-207ENST00000521713 SLC30A9Q6PML9 568 aa17.09■□□□□ 0.33
USP42-207ENST00000521713 ELOA2Q8IYF1 753 aaPredicted RBP17.09■□□□□ 0.33
USP42-207ENST00000521713 RNF25Q96BH1 459 aaPredicted RBP17.09■□□□□ 0.33
USP42-207ENST00000521713 LRRC37BQ96QE4 947 aa17.09■□□□□ 0.33
USP42-207ENST00000521713 RIOX1Q9H6W3 641 aa17.09■□□□□ 0.33
USP42-207ENST00000521713 TUBE1Q9UJT0 475 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms