RNA–Protein interactions for RNA: ENST00000521403.1

CERNA3-201, Transcript of competing endogenous lncRNA 3 for miR-645, humanhuman

TSL 3 BASIC

Gene CERNA3, Length 557 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CERNA3-201ENST00000521403 C17orf75Q9HAS0 396 aa21.66■■□□□ 1.06
CERNA3-201ENST00000521403 PTPRHQ9HD43 1115 aa21.66■■□□□ 1.06
CERNA3-201ENST00000521403 I3L4J1 428 aa21.65■■□□□ 1.06
CERNA3-201ENST00000521403 STK25O00506 426 aa21.65■■□□□ 1.06
CERNA3-201ENST00000521403 TRAPPC3O43617 180 aa21.65■■□□□ 1.06
CERNA3-201ENST00000521403 CD2BP2O95400 341 aaKnown RBP21.65■■□□□ 1.06
CERNA3-201ENST00000521403 HNRNPA1P09651 372 aaKnown RBP eCLIP21.65■■□□□ 1.06
CERNA3-201ENST00000521403 NPR3P17342 541 aa21.65■■□□□ 1.06
CERNA3-201ENST00000521403 GUCY2CP25092 1073 aa21.65■■□□□ 1.06
CERNA3-201ENST00000521403 TKTP29401 623 aaKnown RBP21.65■■□□□ 1.06
CERNA3-201ENST00000521403 BRCC3P46736 316 aa21.65■■□□□ 1.06
CERNA3-201ENST00000521403 NTHL1P78549 312 aa21.65■■□□□ 1.06
CERNA3-201ENST00000521403 SOX4Q06945 474 aaPredicted RBP21.65■■□□□ 1.06
CERNA3-201ENST00000521403 MPZL3Q6UWV2 235 aa21.65■■□□□ 1.06
CERNA3-201ENST00000521403 C3orf58Q8NDZ4 430 aa21.65■■□□□ 1.06
CERNA3-201ENST00000521403 SLC7A14Q8TBB6 771 aa21.65■■□□□ 1.06
CERNA3-201ENST00000521403 NXPE3Q969Y0 559 aa21.65■■□□□ 1.06
CERNA3-201ENST00000521403 CDK5RAP3Q96JB5 506 aa21.65■■□□□ 1.06
CERNA3-201ENST00000521403 ACAP3Q96P50 834 aa21.65■■□□□ 1.06
CERNA3-201ENST00000521403 TIPINQ9BVW5 301 aa21.65■■□□□ 1.06
CERNA3-201ENST00000521403 UPF2Q9HAU5 1272 aaKnown RBP21.65■■□□□ 1.06
CERNA3-201ENST00000521403 SLC38A7Q9NVC3 462 aa21.65■■□□□ 1.06
CERNA3-201ENST00000521403 ANKFY1Q9P2R3 1169 aa21.65■■□□□ 1.06
CERNA3-201ENST00000521403 MTRRQ9UBK8 725 aa21.65■■□□□ 1.06
CERNA3-201ENST00000521403 CDY1Q9Y6F8 540 aa21.65■■□□□ 1.06
CERNA3-201ENST00000521403 DOCK6Q96HP0 2047 aa21.65■■□□□ 1.06
CERNA3-201ENST00000521403 USP34Q70CQ2 3546 aa21.64■■□□□ 1.06
CERNA3-201ENST00000521403 MCF2P10911 925 aa21.64■■□□□ 1.05
CERNA3-201ENST00000521403 AOC1P19801 751 aa21.64■■□□□ 1.05
CERNA3-201ENST00000521403 RFX1P22670 979 aa21.64■■□□□ 1.05
CERNA3-201ENST00000521403 STRN3Q13033 797 aa21.64■■□□□ 1.05
CERNA3-201ENST00000521403 RAB33AQ14088 237 aa21.64■■□□□ 1.05
CERNA3-201ENST00000521403 AXDND1Q5T1B0 1012 aaPredicted RBP21.64■■□□□ 1.05
CERNA3-201ENST00000521403 ALKAL1Q6UXT8 129 aa21.64■■□□□ 1.05
CERNA3-201ENST00000521403 SNX27Q96L92 541 aa21.64■■□□□ 1.05
CERNA3-201ENST00000521403 PNMA5Q96PV4 448 aa21.64■■□□□ 1.05
CERNA3-201ENST00000521403 WNT16Q9UBV4 365 aa21.64■■□□□ 1.05
CERNA3-201ENST00000521403 CA14Q9ULX7 337 aa21.64■■□□□ 1.05
CERNA3-201ENST00000521403 PI15O43692 258 aa21.63■■□□□ 1.05
CERNA3-201ENST00000521403 GFRA3O60609 400 aa21.63■■□□□ 1.05
CERNA3-201ENST00000521403 XYLBO75191 536 aa21.63■■□□□ 1.05
CERNA3-201ENST00000521403 SRFP11831 508 aa21.63■■□□□ 1.05
CERNA3-201ENST00000521403 PLS3P13797 630 aa21.63■■□□□ 1.05
CERNA3-201ENST00000521403 PROZP22891 400 aa21.63■■□□□ 1.05
CERNA3-201ENST00000521403 HOXA9P31269 272 aa21.63■■□□□ 1.05
CERNA3-201ENST00000521403 SMTNP53814 917 aa21.63■■□□□ 1.05
CERNA3-201ENST00000521403 XKR4Q5GH76 650 aa21.63■■□□□ 1.05
CERNA3-201ENST00000521403 HYIQ5T013 277 aa21.63■■□□□ 1.05
CERNA3-201ENST00000521403 CD300LGQ6UXG3 332 aa21.63■■□□□ 1.05
CERNA3-201ENST00000521403 RSPO2Q6UXX9 243 aaPredicted RBP21.63■■□□□ 1.05
CERNA3-201ENST00000521403 ANKS3Q6ZW76 656 aa21.63■■□□□ 1.05
CERNA3-201ENST00000521403 SYT2Q8N9I0 419 aaPredicted RBP21.63■■□□□ 1.05
CERNA3-201ENST00000521403 DDX27Q96GQ7 796 aaKnown RBP21.63■■□□□ 1.05
CERNA3-201ENST00000521403 ZMAT2Q96NC0 199 aaKnown RBP21.63■■□□□ 1.05
CERNA3-201ENST00000521403 SMC3Q9UQE7 1217 aa21.63■■□□□ 1.05
CERNA3-201ENST00000521403 NUMBLQ9Y6R0 609 aa21.63■■□□□ 1.05
CERNA3-201ENST00000521403 PODXLO00592 558 aa21.62■■□□□ 1.05
CERNA3-201ENST00000521403 PLA2G4BP0C869 781 aa21.62■■□□□ 1.05
CERNA3-201ENST00000521403 HTR4Q13639 388 aa21.62■■□□□ 1.05
CERNA3-201ENST00000521403 SPIRE2Q8WWL2 714 aa21.62■■□□□ 1.05
CERNA3-201ENST00000521403 ZBTB45Q96K62 511 aaPredicted RBP21.62■■□□□ 1.05
CERNA3-201ENST00000521403 RTP3Q9BQQ7 232 aa21.62■■□□□ 1.05
CERNA3-201ENST00000521403 NTPCRQ9BSD7 190 aaKnown RBP21.62■■□□□ 1.05
CERNA3-201ENST00000521403 KCNG1Q9UIX4 513 aa21.62■■□□□ 1.05
CERNA3-201ENST00000521403 CDH7Q9ULB5 785 aa21.62■■□□□ 1.05
CERNA3-201ENST00000521403 BACE2Q9Y5Z0 518 aa21.62■■□□□ 1.05
CERNA3-201ENST00000521403 ZFP37Q9Y6Q3 630 aaPredicted RBP21.62■■□□□ 1.05
CERNA3-201ENST00000521403 KRBA1A5PL33 1030 aa21.61■■□□□ 1.05
CERNA3-201ENST00000521403 ANHXE9PGG2 379 aa21.61■■□□□ 1.05
CERNA3-201ENST00000521403 ABLIM1O14639 778 aa21.61■■□□□ 1.05
CERNA3-201ENST00000521403 SLC12A3P55017 1021 aa21.61■■□□□ 1.05
CERNA3-201ENST00000521403 CACNB1Q02641 598 aaPredicted RBP21.61■■□□□ 1.05
CERNA3-201ENST00000521403 UVSSAQ2YD98 709 aa21.61■■□□□ 1.05
CERNA3-201ENST00000521403 SEZ6Q53EL9 994 aa21.61■■□□□ 1.05
CERNA3-201ENST00000521403 ARL6IP4Q66PJ3 421 aaKnown RBP21.61■■□□□ 1.05
CERNA3-201ENST00000521403 TMEM161BQ8NDZ6 487 aa21.61■■□□□ 1.05
CERNA3-201ENST00000521403 GPR152Q8TDT2 470 aa21.61■■□□□ 1.05
CERNA3-201ENST00000521403 C18orf25Q96B23 403 aaPredicted RBP21.61■■□□□ 1.05
CERNA3-201ENST00000521403 CNTN3Q9P232 1028 aa21.61■■□□□ 1.05
CERNA3-201ENST00000521403 NUB1Q9Y5A7 615 aa21.61■■□□□ 1.05
CERNA3-201ENST00000521403 MYO15AQ9UKN7 3530 aa21.61■■□□□ 1.05
CERNA3-201ENST00000521403 MYH11P35749 1972 aa21.61■■□□□ 1.05
CERNA3-201ENST00000521403 CITO14578 2027 aa21.6■■□□□ 1.05
CERNA3-201ENST00000521403 NPHP3-ACAD11A0A0J9YXS1 232 aa21.6■■□□□ 1.05
CERNA3-201ENST00000521403 TOM1L1O75674 476 aa21.6■■□□□ 1.05
CERNA3-201ENST00000521403 MAPTP10636 758 aaKnown RBP21.6■■□□□ 1.05
CERNA3-201ENST00000521403 KCNE1P15382 129 aa21.6■■□□□ 1.05
CERNA3-201ENST00000521403 MATR3P43243 847 aaKnown RBP eCLIP21.6■■□□□ 1.05
CERNA3-201ENST00000521403 MCM2P49736 904 aa21.6■■□□□ 1.05
CERNA3-201ENST00000521403 NOLC1Q14978 699 aaKnown RBP eCLIP21.6■■□□□ 1.05
CERNA3-201ENST00000521403 VARS2Q5ST30 1063 aaKnown RBP21.6■■□□□ 1.05
CERNA3-201ENST00000521403 KCTD17Q8N5Z5 321 aa21.6■■□□□ 1.05
CERNA3-201ENST00000521403 FGF13Q92913 245 aa21.6■■□□□ 1.05
CERNA3-201ENST00000521403 HCFC1R1Q9NWW0 138 aa21.6■■□□□ 1.05
CERNA3-201ENST00000521403 KCND2Q9NZV8 630 aa21.6■■□□□ 1.05
CERNA3-201ENST00000521403 ZFHX2Q9C0A1 2572 aaPredicted RBP21.6■■□□□ 1.05
CERNA3-201ENST00000521403 RPL9P32969 192 aaKnown RBP21.59■■□□□ 1.05
CERNA3-201ENST00000521403 ARPP19P56211 112 aa21.59■■□□□ 1.05
CERNA3-201ENST00000521403 TMEM119Q4V9L6 283 aa21.59■■□□□ 1.05
CERNA3-201ENST00000521403 PABPC1LQ4VXU2 614 aaKnown RBP21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms