RNA–Protein interactions for RNA: ENST00000521331.5

PRKDC-204, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-204ENST00000521331 GUCY1B3Q02153 619 aa16.36■□□□□ 0.21
PRKDC-204ENST00000521331 UPP1Q16831 310 aa16.36■□□□□ 0.21
PRKDC-204ENST00000521331 ZNF528Q3MIS6 628 aa16.36■□□□□ 0.21
PRKDC-204ENST00000521331 GLRA4Q5JXX5 417 aa16.36■□□□□ 0.21
PRKDC-204ENST00000521331 NT5DC1Q5TFE4 455 aa16.36■□□□□ 0.21
PRKDC-204ENST00000521331 NPAS3Q8IXF0 933 aa16.36■□□□□ 0.21
PRKDC-204ENST00000521331 RUBCNQ92622 972 aa16.36■□□□□ 0.21
PRKDC-204ENST00000521331 DDX27Q96GQ7 796 aaKnown RBP16.36■□□□□ 0.21
PRKDC-204ENST00000521331 C8orf76Q96K31 380 aa16.36■□□□□ 0.21
PRKDC-204ENST00000521331 HINFPQ9BQA5 517 aa16.36■□□□□ 0.21
PRKDC-204ENST00000521331 BHMT2Q9H2M3 363 aa16.36■□□□□ 0.21
PRKDC-204ENST00000521331 TOPORSQ9NS56 1045 aaPredicted RBP16.36■□□□□ 0.21
PRKDC-204ENST00000521331 GDE1Q9NZC3 331 aa16.36■□□□□ 0.21
PRKDC-204ENST00000521331 DNMT3BQ9UBC3 853 aaKnown RBP16.36■□□□□ 0.21
PRKDC-204ENST00000521331 TNFSF13BQ9Y275 285 aa16.36■□□□□ 0.21
PRKDC-204ENST00000521331 MRPS23Q9Y3D9 190 aaKnown RBP16.36■□□□□ 0.21
PRKDC-204ENST00000521331 STK24Q9Y6E0 443 aa16.36■□□□□ 0.21
PRKDC-204ENST00000521331 WDR87Q6ZQQ6 2873 aa16.36■□□□□ 0.21
PRKDC-204ENST00000521331 PHLPP2Q6ZVD8 1323 aa16.36■□□□□ 0.21
PRKDC-204ENST00000521331 LAMTOR5O43504 91 aa16.35■□□□□ 0.21
PRKDC-204ENST00000521331 TKTP29401 623 aaKnown RBP16.35■□□□□ 0.21
PRKDC-204ENST00000521331 CCT6AP40227 531 aaKnown RBP16.35■□□□□ 0.21
PRKDC-204ENST00000521331 TRAPPC10P48553 1259 aa16.35■□□□□ 0.21
PRKDC-204ENST00000521331 FXR2P51116 673 aaKnown RBP eCLIP16.35■□□□□ 0.219e-14■■■■■ 39.9
PRKDC-204ENST00000521331 UBXN2BQ14CS0 331 aa16.35■□□□□ 0.21
PRKDC-204ENST00000521331 TTC38Q5R3I4 469 aa16.35■□□□□ 0.21
PRKDC-204ENST00000521331 KXD1Q9BQD3 176 aa16.35■□□□□ 0.21
PRKDC-204ENST00000521331 CCDC94Q9BW85 323 aaPredicted RBP16.35■□□□□ 0.21
PRKDC-204ENST00000521331 AVENQ9NQS1 362 aaPredicted RBP16.35■□□□□ 0.21
PRKDC-204ENST00000521331 SLC38A7Q9NVC3 462 aa16.35■□□□□ 0.21
PRKDC-204ENST00000521331 HCFC1R1Q9NWW0 138 aa16.35■□□□□ 0.21
PRKDC-204ENST00000521331 FBXO4Q9UKT5 387 aa16.35■□□□□ 0.21
PRKDC-204ENST00000521331 OTOGLQ3ZCN5 2332 aa16.35■□□□□ 0.21
PRKDC-204ENST00000521331 SMIM28A0A1B0GU29 152 aa16.34■□□□□ 0.21
PRKDC-204ENST00000521331 FAM170BA6NMN3 283 aa16.34■□□□□ 0.21
PRKDC-204ENST00000521331 KINO60870 393 aaKnown RBP16.34■□□□□ 0.21
PRKDC-204ENST00000521331 LRRN2O75325 713 aa16.34■□□□□ 0.21
PRKDC-204ENST00000521331 ECI2O75521 394 aa16.34■□□□□ 0.21
PRKDC-204ENST00000521331 RHOP08100 348 aa16.34■□□□□ 0.21
PRKDC-204ENST00000521331 ELF1P32519 619 aa16.34■□□□□ 0.21
PRKDC-204ENST00000521331 GRM5P41594 1212 aa16.34■□□□□ 0.21
PRKDC-204ENST00000521331 ST3GAL1Q11201 340 aa16.34■□□□□ 0.21
PRKDC-204ENST00000521331 XKR4Q5GH76 650 aa16.34■□□□□ 0.21
PRKDC-204ENST00000521331 SLC8B1Q6J4K2 584 aa16.34■□□□□ 0.21
PRKDC-204ENST00000521331 CD300LGQ6UXG3 332 aa16.34■□□□□ 0.21
PRKDC-204ENST00000521331 KIAA2013Q8IYS2 634 aa16.34■□□□□ 0.21
PRKDC-204ENST00000521331 MAML2Q8IZL2 1156 aaPredicted RBP16.34■□□□□ 0.21
PRKDC-204ENST00000521331 ZNF461Q8TAF7 563 aa16.34■□□□□ 0.21
PRKDC-204ENST00000521331 ING5Q8WYH8 240 aa16.34■□□□□ 0.21
PRKDC-204ENST00000521331 LLPHQ9BRT6 129 aaKnown RBP16.34■□□□□ 0.21
PRKDC-204ENST00000521331 RAB34Q9BZG1 259 aa16.34■□□□□ 0.21
PRKDC-204ENST00000521331 GOLGA2P5Q9HBQ8 144 aa16.34■□□□□ 0.21
PRKDC-204ENST00000521331 LTB4R2Q9NPC1 389 aa16.34■□□□□ 0.21
PRKDC-204ENST00000521331 SPATA6Q9NWH7 488 aaPredicted RBP16.34■□□□□ 0.21
PRKDC-204ENST00000521331 LRWD1Q9UFC0 647 aa16.34■□□□□ 0.21
PRKDC-204ENST00000521331 KIAA1024Q9UPX6 916 aa16.34■□□□□ 0.21
PRKDC-204ENST00000521331 DCHS1Q96JQ0 3298 aa16.34■□□□□ 0.21
PRKDC-204ENST00000521331 GPR179Q6PRD1 2367 aa16.33■□□□□ 0.2
PRKDC-204ENST00000521331 ARHGEF37A1IGU5 675 aa16.33■□□□□ 0.2
PRKDC-204ENST00000521331 SPTLC1O15269 473 aa16.33■□□□□ 0.2
PRKDC-204ENST00000521331 NCAM2O15394 837 aa16.33■□□□□ 0.2
PRKDC-204ENST00000521331 LRG1P02750 347 aa16.33■□□□□ 0.2
PRKDC-204ENST00000521331 CENPBP07199 599 aaPredicted RBP16.33■□□□□ 0.2
PRKDC-204ENST00000521331 IGFBP6P24592 240 aaPredicted RBP16.33■□□□□ 0.2
PRKDC-204ENST00000521331 BRCC3P46736 316 aa16.33■□□□□ 0.2
PRKDC-204ENST00000521331 DMP1Q13316 513 aaPredicted RBP16.33■□□□□ 0.2
PRKDC-204ENST00000521331 GNL2Q13823 731 aaKnown RBP16.33■□□□□ 0.2
PRKDC-204ENST00000521331 PDIA5Q14554 519 aa16.33■□□□□ 0.2
PRKDC-204ENST00000521331 ECM1Q16610 540 aa16.33■□□□□ 0.2
PRKDC-204ENST00000521331 ZNF568Q3ZCX4 644 aa16.33■□□□□ 0.2
PRKDC-204ENST00000521331 ZBTB41Q5SVQ8 909 aa16.33■□□□□ 0.2
PRKDC-204ENST00000521331 ALKAL1Q6UXT8 129 aa16.33■□□□□ 0.2
PRKDC-204ENST00000521331 C3orf58Q8NDZ4 430 aa16.33■□□□□ 0.2
PRKDC-204ENST00000521331 RMDN1Q96DB5 314 aa16.33■□□□□ 0.2
PRKDC-204ENST00000521331 NELL2Q99435 816 aa16.33■□□□□ 0.2
PRKDC-204ENST00000521331 ACO2Q99798 780 aaKnown RBP16.33■□□□□ 0.2
PRKDC-204ENST00000521331 MRPL4Q9BYD3 311 aaKnown RBP16.33■□□□□ 0.2
PRKDC-204ENST00000521331 CDT1Q9H211 546 aa16.33■□□□□ 0.2
PRKDC-204ENST00000521331 TMEM134Q9H6X4 195 aa16.33■□□□□ 0.2
PRKDC-204ENST00000521331 POLD4Q9HCU8 107 aa16.33■□□□□ 0.2
PRKDC-204ENST00000521331 NOL7Q9UMY1 257 aaKnown RBP16.33■□□□□ 0.2
PRKDC-204ENST00000521331 LIMCH1Q9UPQ0 1083 aa16.33■□□□□ 0.2
PRKDC-204ENST00000521331 CCDC169A6NNP5 214 aa16.32■□□□□ 0.2
PRKDC-204ENST00000521331 H7C4K7 107 aa16.32■□□□□ 0.2
PRKDC-204ENST00000521331 I3L4J1 428 aa16.32■□□□□ 0.2
PRKDC-204ENST00000521331 PODXLO00592 558 aa16.32■□□□□ 0.2
PRKDC-204ENST00000521331 PRRG1O14668 218 aa16.32■□□□□ 0.2
PRKDC-204ENST00000521331 SYN3O14994 580 aa16.32■□□□□ 0.2
PRKDC-204ENST00000521331 ABLIM3O94929 683 aa16.32■□□□□ 0.2
PRKDC-204ENST00000521331 PTPN2P17706 415 aa16.32■□□□□ 0.2
PRKDC-204ENST00000521331 NPTX2P47972 431 aa16.32■□□□□ 0.2
PRKDC-204ENST00000521331 ROR1Q01973 937 aa16.32■□□□□ 0.2
PRKDC-204ENST00000521331 VARS2Q5ST30 1063 aaKnown RBP16.32■□□□□ 0.2
PRKDC-204ENST00000521331 ZNF852Q6ZMS4 543 aa16.32■□□□□ 0.2
PRKDC-204ENST00000521331 TPRG1Q6ZUI0 275 aa16.32■□□□□ 0.2
PRKDC-204ENST00000521331 SUMF1Q8NBK3 374 aa16.32■□□□□ 0.2
PRKDC-204ENST00000521331 FBXO18Q8NFZ0 1043 aa16.32■□□□□ 0.2
PRKDC-204ENST00000521331 SNX29Q8TEQ0 813 aa16.32■□□□□ 0.2
PRKDC-204ENST00000521331 MCRS1Q96EZ8 462 aa16.32■□□□□ 0.2
PRKDC-204ENST00000521331 PTPRHQ9HD43 1115 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms