RNA–Protein interactions for RNA: ENST00000520953.5

SREK1-209, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 2,172 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-209ENST00000520953 DSC3Q14574 896 aa16.28■□□□□ 0.2
SREK1-209ENST00000520953 TRIM65Q6PJ69 517 aa16.28■□□□□ 0.2
SREK1-209ENST00000520953 IFIH1Q9BYX4 1025 aaKnown RBP16.28■□□□□ 0.2
SREK1-209ENST00000520953 TMEM8AQ9HCN3 771 aa16.28■□□□□ 0.2
SREK1-209ENST00000520953 NLRC4Q9NPP4 1024 aa16.28■□□□□ 0.2
SREK1-209ENST00000520953 DCDC2CA8MYV0 355 aa16.27■□□□□ 0.2
SREK1-209ENST00000520953 E4F1Q66K89 784 aaPredicted RBP16.27■□□□□ 0.2
SREK1-209ENST00000520953 KRT39Q6A163 491 aa16.27■□□□□ 0.2
SREK1-209ENST00000520953 ADAM2Q99965 735 aa16.27■□□□□ 0.2
SREK1-209ENST00000520953 FAM105AQ9NUU6 356 aa16.27■□□□□ 0.2
SREK1-209ENST00000520953 TBX21Q9UL17 535 aa16.27■□□□□ 0.2
SREK1-209ENST00000520953 FHOD1Q9Y613 1164 aa16.27■□□□□ 0.2
SREK1-209ENST00000520953 TLR3O15455 904 aaKnown RBP16.27■□□□□ 0.19
SREK1-209ENST00000520953 CST3P01034 146 aaPredicted RBP16.27■□□□□ 0.19
SREK1-209ENST00000520953 PNMA6AP0CW24 399 aaPredicted RBP16.27■□□□□ 0.19
SREK1-209ENST00000520953 POLR2FP61218 127 aaKnown RBP16.27■□□□□ 0.19
SREK1-209ENST00000520953 BIRC3Q13489 604 aa16.27■□□□□ 0.19
SREK1-209ENST00000520953 BFSP2Q13515 415 aa16.27■□□□□ 0.19
SREK1-209ENST00000520953 ZACNQ401N2 412 aa16.27■□□□□ 0.19
SREK1-209ENST00000520953 C1orf53Q5VUE5 145 aa16.27■□□□□ 0.19
SREK1-209ENST00000520953 SPOPLQ6IQ16 392 aa16.27■□□□□ 0.19
SREK1-209ENST00000520953 PHLDB3Q6NSJ2 640 aa16.27■□□□□ 0.19
SREK1-209ENST00000520953 NECAB2Q7Z6G3 386 aa16.27■□□□□ 0.19
SREK1-209ENST00000520953 PPFIBP1Q86W92 1011 aa16.27■□□□□ 0.19
SREK1-209ENST00000520953 ARHGEF19Q8IW93 802 aa16.27■□□□□ 0.19
SREK1-209ENST00000520953 KAT5Q92993 513 aa16.27■□□□□ 0.19
SREK1-209ENST00000520953 SNX27Q96L92 541 aa16.27■□□□□ 0.19
SREK1-209ENST00000520953 ZFP42Q96MM3 310 aa16.27■□□□□ 0.19
SREK1-209ENST00000520953 TOX2Q96NM4 488 aa16.27■□□□□ 0.19
SREK1-209ENST00000520953 CCDC94Q9BW85 323 aaPredicted RBP16.27■□□□□ 0.19
SREK1-209ENST00000520953 SEZ6LQ9BYH1 1024 aa16.27■□□□□ 0.19
SREK1-209ENST00000520953 PARP2Q9UGN5 583 aa16.27■□□□□ 0.19
SREK1-209ENST00000520953 MFAP3LO75121 409 aa16.26■□□□□ 0.19
SREK1-209ENST00000520953 ATF7P17544 494 aaPredicted RBP16.26■□□□□ 0.19
SREK1-209ENST00000520953 KLHDC7AQ5VTJ3 777 aa16.26■□□□□ 0.19
SREK1-209ENST00000520953 WDR49Q8IV35 697 aa16.26■□□□□ 0.19
SREK1-209ENST00000520953 EHBP1Q8NDI1 1231 aa16.26■□□□□ 0.19
SREK1-209ENST00000520953 NEK11Q8NG66 645 aa16.26■□□□□ 0.19
SREK1-209ENST00000520953 KCND1Q9NSA2 647 aa16.26■□□□□ 0.19
SREK1-209ENST00000520953 TANC1Q9C0D5 1861 aa16.26■□□□□ 0.19
SREK1-209ENST00000520953 GTPBP10A4D1E9 387 aaKnown RBP16.26■□□□□ 0.19
SREK1-209ENST00000520953 PITPNM1O00562 1244 aa16.26■□□□□ 0.19
SREK1-209ENST00000520953 HLA-DRAP01903 254 aa16.26■□□□□ 0.19
SREK1-209ENST00000520953 IQCEQ6IPM2 695 aa16.26■□□□□ 0.19
SREK1-209ENST00000520953 RRAGAQ7L523 313 aa16.26■□□□□ 0.19
SREK1-209ENST00000520953 UBE2Q1Q7Z7E8 422 aa16.26■□□□□ 0.19
SREK1-209ENST00000520953 CCAR2Q8N163 923 aaKnown RBP16.26■□□□□ 0.19
SREK1-209ENST00000520953 RNF169Q8NCN4 708 aa16.26■□□□□ 0.19
SREK1-209ENST00000520953 DBF4BQ8NFT6 615 aa16.26■□□□□ 0.19
SREK1-209ENST00000520953 BAP1Q92560 729 aa16.26■□□□□ 0.19
SREK1-209ENST00000520953 C18orf25Q96B23 403 aaPredicted RBP16.26■□□□□ 0.19
SREK1-209ENST00000520953 VWCEQ96DN2 955 aa16.26■□□□□ 0.19
SREK1-209ENST00000520953 CCDC51Q96ER9 411 aa16.26■□□□□ 0.19
SREK1-209ENST00000520953 TMEM39AQ9NV64 488 aa16.26■□□□□ 0.19
SREK1-209ENST00000520953 CAPN11Q9UMQ6 739 aa16.26■□□□□ 0.19
SREK1-209ENST00000520953 PLAGL2Q9UPG8 496 aa16.26■□□□□ 0.19
SREK1-209ENST00000520953 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.26■□□□□ 0.191e-7■■■□□ 17.2
SREK1-209ENST00000520953 TRIM43BA6NCK2 446 aa16.25■□□□□ 0.19
SREK1-209ENST00000520953 AKR1B15C9JRZ8 316 aaPredicted RBP16.25■□□□□ 0.19
SREK1-209ENST00000520953 TNNT1P13805 278 aa16.25■□□□□ 0.19
SREK1-209ENST00000520953 UCHL3P15374 230 aa16.25■□□□□ 0.19
SREK1-209ENST00000520953 ZSCAN20P17040 1043 aaPredicted RBP16.25■□□□□ 0.19
SREK1-209ENST00000520953 GTF2H1P32780 548 aa16.25■□□□□ 0.19
SREK1-209ENST00000520953 KRT9P35527 623 aa16.25■□□□□ 0.19
SREK1-209ENST00000520953 ALKAL1Q6UXT8 129 aa16.25■□□□□ 0.19
SREK1-209ENST00000520953 TRAPPC11Q7Z392 1133 aa16.25■□□□□ 0.19
SREK1-209ENST00000520953 DEFB128Q7Z7B8 93 aa16.25■□□□□ 0.19
SREK1-209ENST00000520953 FBXL13Q8NEE6 735 aa16.25■□□□□ 0.19
SREK1-209ENST00000520953 TATDN2Q93075 761 aa16.25■□□□□ 0.19
SREK1-209ENST00000520953 TRIM43Q96BQ3 446 aaPredicted RBP16.25■□□□□ 0.19
SREK1-209ENST00000520953 PRDM5Q9NQX1 630 aaPredicted RBP16.25■□□□□ 0.19
SREK1-209ENST00000520953 CHST12Q9NRB3 414 aa16.25■□□□□ 0.19
SREK1-209ENST00000520953 RAB20Q9NX57 234 aa16.25■□□□□ 0.19
SREK1-209ENST00000520953 CACNG4Q9UBN1 327 aa16.25■□□□□ 0.19
SREK1-209ENST00000520953 TUBGCP4Q9UGJ1 667 aa16.25■□□□□ 0.19
SREK1-209ENST00000520953 COQ4Q9Y3A0 265 aa16.25■□□□□ 0.19
SREK1-209ENST00000520953 IL18RAPO95256 599 aa16.24■□□□□ 0.19
SREK1-209ENST00000520953 CLTBP09497 229 aa16.24■□□□□ 0.19
SREK1-209ENST00000520953 RALGAPA2Q2PPJ7 1873 aa16.24■□□□□ 0.19
SREK1-209ENST00000520953 AGMOQ6ZNB7 445 aa16.24■□□□□ 0.19
SREK1-209ENST00000520953 C1orf127Q8N9H9 656 aa16.24■□□□□ 0.19
SREK1-209ENST00000520953 KIF12Q96FN5 646 aa16.24■□□□□ 0.19
SREK1-209ENST00000520953 APOBEC3GQ9HC16 384 aaKnown RBP16.24■□□□□ 0.19
SREK1-209ENST00000520953 TRMT1Q9NXH9 659 aaKnown RBP16.24■□□□□ 0.19
SREK1-209ENST00000520953 SIX4Q9UIU6 781 aa16.24■□□□□ 0.19
SREK1-209ENST00000520953 SQORQ9Y6N5 450 aa16.24■□□□□ 0.19
SREK1-209ENST00000520953 DYNC1I1O14576 645 aa16.24■□□□□ 0.19
SREK1-209ENST00000520953 TMEM191BP0C7N4 346 aa16.24■□□□□ 0.19
SREK1-209ENST00000520953 PIK3CAP42336 1068 aa16.24■□□□□ 0.19
SREK1-209ENST00000520953 ENPEPQ07075 957 aa16.24■□□□□ 0.19
SREK1-209ENST00000520953 DUOXA2Q1HG44 320 aa16.24■□□□□ 0.19
SREK1-209ENST00000520953 NYAP1Q6ZVC0 841 aa16.24■□□□□ 0.19
SREK1-209ENST00000520953 USP37Q86T82 979 aa16.24■□□□□ 0.19
SREK1-209ENST00000520953 TMEM139Q8IV31 216 aa16.24■□□□□ 0.19
SREK1-209ENST00000520953 USP38Q8NB14 1042 aa16.24■□□□□ 0.19
SREK1-209ENST00000520953 CXorf38Q8TB03 319 aa16.24■□□□□ 0.19
SREK1-209ENST00000520953 PLCB1Q9NQ66 1216 aa16.24■□□□□ 0.19
SREK1-209ENST00000520953 ABHD10Q9NUJ1 306 aa16.24■□□□□ 0.19
SREK1-209ENST00000520953 ALPK3Q96L96 1907 aa16.24■□□□□ 0.19
SREK1-209ENST00000520953 LRRC53A6NM62 1247 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms