RNA–Protein interactions for RNA: ENST00000520946.1

MRPS28-206, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 411 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-206ENST00000520946 KCNA4P22459 653 aa12.67□□□□□ -0.38
MRPS28-206ENST00000520946 TARSP26639 723 aaKnown RBP12.67□□□□□ -0.38
MRPS28-206ENST00000520946 RPS9P46781 194 aaKnown RBP12.67□□□□□ -0.38
MRPS28-206ENST00000520946 SCRN1Q12765 414 aa12.67□□□□□ -0.38
MRPS28-206ENST00000520946 DCAF4L1Q3SXM0 396 aa12.67□□□□□ -0.38
MRPS28-206ENST00000520946 PPP4R3CPQ6ZMV5 832 aa12.67□□□□□ -0.38
MRPS28-206ENST00000520946 ZBTB44Q8NCP5 570 aa12.67□□□□□ -0.38
MRPS28-206ENST00000520946 UROC1Q96N76 676 aa12.67□□□□□ -0.38
MRPS28-206ENST00000520946 NACC1Q96RE7 527 aa12.67□□□□□ -0.38
MRPS28-206ENST00000520946 CORO1BQ9BR76 489 aa12.67□□□□□ -0.38
MRPS28-206ENST00000520946 TRMT61BQ9BVS5 477 aaKnown RBP12.67□□□□□ -0.38
MRPS28-206ENST00000520946 TM6SF1Q9BZW5 370 aa12.67□□□□□ -0.38
MRPS28-206ENST00000520946 EPC1Q9H2F5 836 aa12.67□□□□□ -0.38
MRPS28-206ENST00000520946 FZD8Q9H461 694 aa12.67□□□□□ -0.38
MRPS28-206ENST00000520946 PDZD7Q9H5P4 517 aa12.67□□□□□ -0.38
MRPS28-206ENST00000520946 GJB4Q9NTQ9 266 aa12.67□□□□□ -0.38
MRPS28-206ENST00000520946 MTRRQ9UBK8 725 aa12.67□□□□□ -0.38
MRPS28-206ENST00000520946 MYH15Q9Y2K3 1946 aa12.66□□□□□ -0.38
MRPS28-206ENST00000520946 PTGESO14684 152 aa12.66□□□□□ -0.38
MRPS28-206ENST00000520946 FGFR3P22607 806 aa12.66□□□□□ -0.38
MRPS28-206ENST00000520946 CLCNKBP51801 687 aa12.66□□□□□ -0.38
MRPS28-206ENST00000520946 MTAPQ13126 283 aa12.66□□□□□ -0.38
MRPS28-206ENST00000520946 NR5A1Q13285 461 aa12.66□□□□□ -0.38
MRPS28-206ENST00000520946 GRM2Q14416 872 aa12.66□□□□□ -0.38
MRPS28-206ENST00000520946 LPAL2Q16609 132 aa12.66□□□□□ -0.38
MRPS28-206ENST00000520946 FAM187BQ17R55 369 aa12.66□□□□□ -0.38
MRPS28-206ENST00000520946 GLRA4Q5JXX5 417 aa12.66□□□□□ -0.38
MRPS28-206ENST00000520946 PDZD4Q76G19 769 aaPredicted RBP12.66□□□□□ -0.38
MRPS28-206ENST00000520946 DNASE1L2Q92874 299 aa12.66□□□□□ -0.38
MRPS28-206ENST00000520946 IRF7Q92985 503 aa12.66□□□□□ -0.38
MRPS28-206ENST00000520946 CLDN23Q96B33 292 aa12.66□□□□□ -0.38
MRPS28-206ENST00000520946 ELSPBP1Q96BH3 223 aa12.66□□□□□ -0.38
MRPS28-206ENST00000520946 CYP4F11Q9HBI6 524 aa12.66□□□□□ -0.38
MRPS28-206ENST00000520946 TUFT1Q9NNX1 390 aa12.66□□□□□ -0.38
MRPS28-206ENST00000520946 TOPORSQ9NS56 1045 aaPredicted RBP12.66□□□□□ -0.38
MRPS28-206ENST00000520946 DAXXQ9UER7 740 aaPredicted RBP12.66□□□□□ -0.38
MRPS28-206ENST00000520946 NUB1Q9Y5A7 615 aa12.66□□□□□ -0.38
MRPS28-206ENST00000520946 BACE2Q9Y5Z0 518 aa12.66□□□□□ -0.38
MRPS28-206ENST00000520946 FAM205CA6NFA0 338 aa12.65□□□□□ -0.38
MRPS28-206ENST00000520946 H7C4K7 107 aa12.65□□□□□ -0.38
MRPS28-206ENST00000520946 ACKR2O00590 384 aa12.65□□□□□ -0.38
MRPS28-206ENST00000520946 EPB41L2O43491 1005 aaKnown RBP12.65□□□□□ -0.38
MRPS28-206ENST00000520946 TKTP29401 623 aaKnown RBP12.65□□□□□ -0.38
MRPS28-206ENST00000520946 NAMPTP43490 491 aa12.65□□□□□ -0.38
MRPS28-206ENST00000520946 RBM25P49756 843 aaKnown RBP12.65□□□□□ -0.38
MRPS28-206ENST00000520946 CCR3P51677 355 aa12.65□□□□□ -0.38
MRPS28-206ENST00000520946 EFNA5P52803 228 aa12.65□□□□□ -0.38
MRPS28-206ENST00000520946 FOSBP53539 338 aa12.65□□□□□ -0.38
MRPS28-206ENST00000520946 SPEM2Q0P670 501 aa12.65□□□□□ -0.38
MRPS28-206ENST00000520946 ANKRD1Q15327 319 aa12.65□□□□□ -0.38
MRPS28-206ENST00000520946 EARS2Q5JPH6 523 aaKnown RBP12.65□□□□□ -0.38
MRPS28-206ENST00000520946 ATF7IP2Q5U623 682 aa12.65□□□□□ -0.38
MRPS28-206ENST00000520946 CDCA2Q69YH5 1023 aaPredicted RBP12.65□□□□□ -0.38
MRPS28-206ENST00000520946 TANGO2Q6ICL3 276 aa12.65□□□□□ -0.38
MRPS28-206ENST00000520946 PADI6Q6TGC4 694 aa12.65□□□□□ -0.38
MRPS28-206ENST00000520946 YAF2Q8IY57 180 aa12.65□□□□□ -0.38
MRPS28-206ENST00000520946 CELF5Q8N6W0 485 aaKnown RBP12.65□□□□□ -0.38
MRPS28-206ENST00000520946 ZNF461Q8TAF7 563 aa12.65□□□□□ -0.38
MRPS28-206ENST00000520946 FAM200AQ8TCP9 573 aa12.65□□□□□ -0.38
MRPS28-206ENST00000520946 CSGALNACT1Q8TDX6 532 aa12.65□□□□□ -0.38
MRPS28-206ENST00000520946 FAM3CQ92520 227 aa12.65□□□□□ -0.38
MRPS28-206ENST00000520946 DDX27Q96GQ7 796 aaKnown RBP12.65□□□□□ -0.38
MRPS28-206ENST00000520946 ZNF512Q96ME7 567 aaPredicted RBP12.65□□□□□ -0.38
MRPS28-206ENST00000520946 CCDC94Q9BW85 323 aaPredicted RBP12.65□□□□□ -0.38
MRPS28-206ENST00000520946 PLA2G2FQ9BZM2 168 aa12.65□□□□□ -0.38
MRPS28-206ENST00000520946 SLITRK6Q9H5Y7 841 aa12.65□□□□□ -0.38
MRPS28-206ENST00000520946 LMAN1LQ9HAT1 526 aa12.65□□□□□ -0.38
MRPS28-206ENST00000520946 SLC38A7Q9NVC3 462 aa12.65□□□□□ -0.38
MRPS28-206ENST00000520946 DOCK6Q96HP0 2047 aa12.65□□□□□ -0.38
MRPS28-206ENST00000520946 OTOGLQ3ZCN5 2332 aa12.64□□□□□ -0.39
MRPS28-206ENST00000520946 TMEM189-UBE2V1I3L0A0 370 aa12.64□□□□□ -0.39
MRPS28-206ENST00000520946 I3L4J1 428 aa12.64□□□□□ -0.39
MRPS28-206ENST00000520946 K7ERI5 159 aa12.64□□□□□ -0.39
MRPS28-206ENST00000520946 ZNF263O14978 683 aa12.64□□□□□ -0.39
MRPS28-206ENST00000520946 PFKFB2O60825 505 aa12.64□□□□□ -0.39
MRPS28-206ENST00000520946 LILRB5O75023 590 aa12.64□□□□□ -0.39
MRPS28-206ENST00000520946 KRT37O76014 449 aa12.64□□□□□ -0.39
MRPS28-206ENST00000520946 CEBPBP17676 345 aa12.64□□□□□ -0.39
MRPS28-206ENST00000520946 GDI1P31150 447 aa12.64□□□□□ -0.39
MRPS28-206ENST00000520946 MCM7P33993 719 aa12.64□□□□□ -0.39
MRPS28-206ENST00000520946 BRCC3P46736 316 aa12.64□□□□□ -0.39
MRPS28-206ENST00000520946 SAFBQ15424 915 aaKnown RBP eCLIP12.64□□□□□ -0.39
MRPS28-206ENST00000520946 LAIR1Q6GTX8 287 aa12.64□□□□□ -0.39
MRPS28-206ENST00000520946 TCHPQ9BT92 498 aa12.64□□□□□ -0.39
MRPS28-206ENST00000520946 IER2Q9BTL4 223 aa12.64□□□□□ -0.39
MRPS28-206ENST00000520946 USP20Q9Y2K6 914 aa12.64□□□□□ -0.39
MRPS28-206ENST00000520946 FANCMQ8IYD8 2048 aa12.64□□□□□ -0.39
MRPS28-206ENST00000520946 MYO15AQ9UKN7 3530 aa12.63□□□□□ -0.39
MRPS28-206ENST00000520946 ARID2Q68CP9 1835 aa12.63□□□□□ -0.39
MRPS28-206ENST00000520946 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.63□□□□□ -0.39
MRPS28-206ENST00000520946 CCDC169A6NNP5 214 aa12.63□□□□□ -0.39
MRPS28-206ENST00000520946 BTBD18B2RXH4 712 aa12.63□□□□□ -0.39
MRPS28-206ENST00000520946 DTNBO60941 627 aa12.63□□□□□ -0.39
MRPS28-206ENST00000520946 MYL4P12829 197 aa12.63□□□□□ -0.39
MRPS28-206ENST00000520946 PSMC3P17980 439 aa12.63□□□□□ -0.39
MRPS28-206ENST00000520946 CYP11B2P19099 503 aa12.63□□□□□ -0.39
MRPS28-206ENST00000520946 MARCKSP29966 332 aaPredicted RBP12.63□□□□□ -0.39
MRPS28-206ENST00000520946 CXCL12P48061 93 aa12.63□□□□□ -0.39
MRPS28-206ENST00000520946 KPNA1P52294 538 aaPredicted RBP12.63□□□□□ -0.39
MRPS28-206ENST00000520946 OSTNP61366 133 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms