RNA–Protein interactions for RNA: ENST00000520850.5

TNPO1-212, Transcript of transportin 1, humanhuman

TSL 2

Gene TNPO1, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-212ENST00000520850 SYCP3Q8IZU3 236 aa17.74■□□□□ 0.43
TNPO1-212ENST00000520850 ZMAT2Q96NC0 199 aaKnown RBP17.74■□□□□ 0.43
TNPO1-212ENST00000520850 HERC2P3Q9BVR0 1158 aa17.74■□□□□ 0.43
TNPO1-212ENST00000520850 FGFBP2Q9BYJ0 223 aa17.74■□□□□ 0.43
TNPO1-212ENST00000520850 BLZF1Q9H2G9 400 aa17.74■□□□□ 0.43
TNPO1-212ENST00000520850 GOLPH3LQ9H4A5 285 aa17.74■□□□□ 0.43
TNPO1-212ENST00000520850 UBE2ZQ9H832 354 aaPredicted RBP17.74■□□□□ 0.43
TNPO1-212ENST00000520850 SPTBN5Q9NRC6 3674 aaKnown RBP17.74■□□□□ 0.43
TNPO1-212ENST00000520850 XPOTO43592 962 aaKnown RBP17.73■□□□□ 0.43
TNPO1-212ENST00000520850 TADA2AO75478 443 aa17.73■□□□□ 0.43
TNPO1-212ENST00000520850 PRPF6O94906 941 aaKnown RBP17.73■□□□□ 0.43
TNPO1-212ENST00000520850 HOXD13P35453 343 aa17.73■□□□□ 0.43
TNPO1-212ENST00000520850 DSG1Q02413 1049 aa17.73■□□□□ 0.43
TNPO1-212ENST00000520850 FAM160A1Q05DH4 1040 aa17.73■□□□□ 0.43
TNPO1-212ENST00000520850 PPP2R3AQ06190 1150 aa17.73■□□□□ 0.43
TNPO1-212ENST00000520850 ENOX2Q16206 610 aaKnown RBP17.73■□□□□ 0.43
TNPO1-212ENST00000520850 USP41Q3LFD5 358 aa17.73■□□□□ 0.43
TNPO1-212ENST00000520850 LEXMQ3ZCV2 418 aa17.73■□□□□ 0.43
TNPO1-212ENST00000520850 KIAA0319Q5VV43 1072 aa17.73■□□□□ 0.43
TNPO1-212ENST00000520850 ADGRD2Q7Z7M1 963 aa17.73■□□□□ 0.43
TNPO1-212ENST00000520850 SCFD1Q8WVM8 642 aa17.73■□□□□ 0.43
TNPO1-212ENST00000520850 POMGNT1Q8WZA1 660 aa17.73■□□□□ 0.43
TNPO1-212ENST00000520850 ASB2Q96Q27 587 aa17.73■□□□□ 0.43
TNPO1-212ENST00000520850 RXFP1Q9HBX9 757 aa17.73■□□□□ 0.43
TNPO1-212ENST00000520850 PRG3Q9Y2Y8 225 aaPredicted RBP17.73■□□□□ 0.43
TNPO1-212ENST00000520850 HIDE1A8MVS5 230 aa17.72■□□□□ 0.43
TNPO1-212ENST00000520850 LACTBL1A8MY62 500 aa17.72■□□□□ 0.43
TNPO1-212ENST00000520850 TRAPPC3O43617 180 aa17.72■□□□□ 0.43
TNPO1-212ENST00000520850 RHOBTB3O94955 611 aa17.72■□□□□ 0.43
TNPO1-212ENST00000520850 HARSP12081 509 aaKnown RBP17.72■□□□□ 0.43
TNPO1-212ENST00000520850 LRPAP1P30533 357 aa17.72■□□□□ 0.43
TNPO1-212ENST00000520850 LTBRP36941 435 aa17.72■□□□□ 0.43
TNPO1-212ENST00000520850 TNFSF9P41273 254 aa17.72■□□□□ 0.43
TNPO1-212ENST00000520850 DPYDQ12882 1025 aa17.72■□□□□ 0.43
TNPO1-212ENST00000520850 KCNB1Q14721 858 aa17.72■□□□□ 0.43
TNPO1-212ENST00000520850 PTPN14Q15678 1187 aa17.72■□□□□ 0.43
TNPO1-212ENST00000520850 FUT10Q6P4F1 479 aa17.72■□□□□ 0.43
TNPO1-212ENST00000520850 PDXDC1Q6P996 788 aa17.72■□□□□ 0.43
TNPO1-212ENST00000520850 CRELD2Q6UXH1 353 aaPredicted RBP17.72■□□□□ 0.43
TNPO1-212ENST00000520850 CLEC17AQ6ZS10 378 aa17.72■□□□□ 0.43
TNPO1-212ENST00000520850 PPFIBP1Q86W92 1011 aa17.72■□□□□ 0.43
TNPO1-212ENST00000520850 CCDC47Q96A33 483 aaKnown RBP17.72■□□□□ 0.43
TNPO1-212ENST00000520850 KIAA1586Q9HCI6 787 aa17.72■□□□□ 0.43
TNPO1-212ENST00000520850 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.72■□□□□ 0.43
TNPO1-212ENST00000520850 MRPL17Q9NRX2 175 aaKnown RBP17.72■□□□□ 0.43
TNPO1-212ENST00000520850 UBQLN1Q9UMX0 589 aaKnown RBP17.72■□□□□ 0.43
TNPO1-212ENST00000520850 C2CD2Q9Y426 696 aa17.72■□□□□ 0.43
TNPO1-212ENST00000520850 SF3B1O75533 1304 aaKnown RBP eCLIP17.72■□□□□ 0.43
TNPO1-212ENST00000520850 CASTOR2A6NHX0 329 aa17.71■□□□□ 0.43
TNPO1-212ENST00000520850 EXTL3O43909 919 aa17.71■□□□□ 0.43
TNPO1-212ENST00000520850 IL18RAPO95256 599 aa17.71■□□□□ 0.43
TNPO1-212ENST00000520850 CXCL8P10145 99 aa17.71■□□□□ 0.43
TNPO1-212ENST00000520850 CASP1P29466 404 aa17.71■□□□□ 0.43
TNPO1-212ENST00000520850 NRIP1P48552 1158 aa17.71■□□□□ 0.43
TNPO1-212ENST00000520850 CLCNKBP51801 687 aa17.71■□□□□ 0.43
TNPO1-212ENST00000520850 CREMQ03060 361 aa17.71■□□□□ 0.43
TNPO1-212ENST00000520850 KMT5BQ4FZB7 885 aa17.71■□□□□ 0.43
TNPO1-212ENST00000520850 SEZ6Q53EL9 994 aa17.71■□□□□ 0.43
TNPO1-212ENST00000520850 GLRA4Q5JXX5 417 aa17.71■□□□□ 0.43
TNPO1-212ENST00000520850 PLPP4Q5VZY2 271 aa17.71■□□□□ 0.43
TNPO1-212ENST00000520850 C12orf56Q8IXR9 622 aa17.71■□□□□ 0.43
TNPO1-212ENST00000520850 GRAMD1CQ8IYS0 662 aa17.71■□□□□ 0.43
TNPO1-212ENST00000520850 HPS3Q969F9 1004 aa17.71■□□□□ 0.43
TNPO1-212ENST00000520850 FBXL18Q96ME1 805 aa17.71■□□□□ 0.43
TNPO1-212ENST00000520850 PAAF1Q9BRP4 392 aa17.71■□□□□ 0.43
TNPO1-212ENST00000520850 EMILIN2Q9BXX0 1053 aa17.71■□□□□ 0.43
TNPO1-212ENST00000520850 GPR62Q9BZJ7 368 aa17.71■□□□□ 0.43
TNPO1-212ENST00000520850 PRDM6Q9NQX0 595 aa17.71■□□□□ 0.43
TNPO1-212ENST00000520850 EXOC1Q9NV70 894 aa17.71■□□□□ 0.43
TNPO1-212ENST00000520850 FNIP2Q9P278 1114 aa17.71■□□□□ 0.43
TNPO1-212ENST00000520850 TISP43B9A030 160 aa17.7■□□□□ 0.42
TNPO1-212ENST00000520850 TGFB1I1O43294 461 aa17.7■□□□□ 0.42
TNPO1-212ENST00000520850 B3GAT3O94766 335 aa17.7■□□□□ 0.42
TNPO1-212ENST00000520850 KIF20AO95235 890 aa17.7■□□□□ 0.42
TNPO1-212ENST00000520850 RPN1P04843 607 aaKnown RBP17.7■□□□□ 0.42
TNPO1-212ENST00000520850 URODP06132 367 aa17.7■□□□□ 0.42
TNPO1-212ENST00000520850 SRGAP2BP0DMP2 458 aa17.7■□□□□ 0.42
TNPO1-212ENST00000520850 GLUD2P49448 558 aa17.7■□□□□ 0.42
TNPO1-212ENST00000520850 SOX4Q06945 474 aaPredicted RBP17.7■□□□□ 0.42
TNPO1-212ENST00000520850 STK4Q13043 487 aa17.7■□□□□ 0.42
TNPO1-212ENST00000520850 KNOP1Q1ED39 458 aaKnown RBP17.7■□□□□ 0.42
TNPO1-212ENST00000520850 TJAP1Q5JTD0 557 aa17.7■□□□□ 0.42
TNPO1-212ENST00000520850 ZBTB41Q5SVQ8 909 aa17.7■□□□□ 0.42
TNPO1-212ENST00000520850 SPATA1Q5VX52 437 aa17.7■□□□□ 0.42
TNPO1-212ENST00000520850 CD300LGQ6UXG3 332 aa17.7■□□□□ 0.42
TNPO1-212ENST00000520850 GLIS3Q8NEA6 775 aa17.7■□□□□ 0.42
TNPO1-212ENST00000520850 GOLGA5Q8TBA6 731 aa17.7■□□□□ 0.42
TNPO1-212ENST00000520850 MSLNLQ96KJ4 702 aa17.7■□□□□ 0.42
TNPO1-212ENST00000520850 GTPBP4Q9BZE4 634 aaKnown RBP17.7■□□□□ 0.42
TNPO1-212ENST00000520850 SLC39A2Q9NP94 309 aa17.7■□□□□ 0.42
TNPO1-212ENST00000520850 CLDND1Q9NY35 253 aa17.7■□□□□ 0.42
TNPO1-212ENST00000520850 HOOK1Q9UJC3 728 aaKnown RBP17.7■□□□□ 0.42
TNPO1-212ENST00000520850 PDCD11Q14690 1871 aaKnown RBP17.69■□□□□ 0.42
TNPO1-212ENST00000520850 CLASP2O75122 1294 aaKnown RBP17.69■□□□□ 0.42
TNPO1-212ENST00000520850 KIF4AO95239 1232 aa17.69■□□□□ 0.42
TNPO1-212ENST00000520850 HOXB8P17481 243 aaPredicted RBP17.69■□□□□ 0.42
TNPO1-212ENST00000520850 ACOT2P49753 483 aa17.69■□□□□ 0.42
TNPO1-212ENST00000520850 ARMCX5Q6P1M9 558 aa17.69■□□□□ 0.42
TNPO1-212ENST00000520850 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.69■□□□□ 0.42
TNPO1-212ENST00000520850 HS2ST1Q7LGA3 356 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms