RNA–Protein interactions for RNA: ENST00000520579.5

PDGFRB-207, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 1 (best)

Gene PDGFRB, Length 3,860 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-207ENST00000520579 MAP7Q14244 749 aa10.72□□□□□ -0.69
PDGFRB-207ENST00000520579 KRT72Q14CN4 511 aa10.72□□□□□ -0.69
PDGFRB-207ENST00000520579 IZUMO2Q6UXV1 221 aa10.72□□□□□ -0.69
PDGFRB-207ENST00000520579 MAML1Q92585 1016 aa10.72□□□□□ -0.69
PDGFRB-207ENST00000520579 KAT5Q92993 513 aa10.72□□□□□ -0.69
PDGFRB-207ENST00000520579 SYNCQ9H7C4 482 aa10.72□□□□□ -0.69
PDGFRB-207ENST00000520579 CHST7Q9NS84 486 aa10.72□□□□□ -0.69
PDGFRB-207ENST00000520579 AFDNP55196 1824 aaKnown RBP10.72□□□□□ -0.69
PDGFRB-207ENST00000520579 RRP1BQ14684 758 aaKnown RBP10.72□□□□□ -0.69
PDGFRB-207ENST00000520579 PRR16Q569H4 304 aa10.72□□□□□ -0.69
PDGFRB-207ENST00000520579 C10orf76Q5T2E6 689 aa10.72□□□□□ -0.69
PDGFRB-207ENST00000520579 ARHGEF18Q6ZSZ5 1173 aa10.72□□□□□ -0.69
PDGFRB-207ENST00000520579 TEX9Q8N6V9 391 aa10.72□□□□□ -0.69
PDGFRB-207ENST00000520579 TBC1D16Q8TBP0 767 aa10.72□□□□□ -0.69
PDGFRB-207ENST00000520579 ACSF2Q96CM8 615 aaPredicted RBP10.72□□□□□ -0.69
PDGFRB-207ENST00000520579 OXCT2Q9BYC2 517 aaPredicted RBP10.72□□□□□ -0.69
PDGFRB-207ENST00000520579 KCNMB3Q9NPA1 279 aa10.72□□□□□ -0.69
PDGFRB-207ENST00000520579 UBE2TQ9NPD8 197 aaPredicted RBP10.72□□□□□ -0.69
PDGFRB-207ENST00000520579 RIC8AQ9NPQ8 531 aa10.72□□□□□ -0.69
PDGFRB-207ENST00000520579 DIS3Q9Y2L1 958 aaKnown RBP10.72□□□□□ -0.69
PDGFRB-207ENST00000520579 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.72□□□□□ -0.69
PDGFRB-207ENST00000520579 PNPLA7Q6ZV29 1317 aa10.71□□□□□ -0.69
PDGFRB-207ENST00000520579 TBCAO75347 108 aaKnown RBP10.71□□□□□ -0.69
PDGFRB-207ENST00000520579 OR6B1O95007 311 aa10.71□□□□□ -0.69
PDGFRB-207ENST00000520579 ENO1P06733 434 aaKnown RBP10.71□□□□□ -0.69
PDGFRB-207ENST00000520579 ATP6V1B1P15313 513 aa10.71□□□□□ -0.69
PDGFRB-207ENST00000520579 TAC1P20366 129 aa10.71□□□□□ -0.69
PDGFRB-207ENST00000520579 EPHB1P54762 984 aa10.71□□□□□ -0.69
PDGFRB-207ENST00000520579 STRN3Q13033 797 aa10.71□□□□□ -0.69
PDGFRB-207ENST00000520579 DDB1Q16531 1140 aa10.71□□□□□ -0.69
PDGFRB-207ENST00000520579 TTBK2Q6IQ55 1244 aa10.71□□□□□ -0.69
PDGFRB-207ENST00000520579 NLRP9Q7RTR0 991 aa10.71□□□□□ -0.69
PDGFRB-207ENST00000520579 TTC7BQ86TV6 843 aa10.71□□□□□ -0.69
PDGFRB-207ENST00000520579 CCDC125Q86Z20 511 aa10.71□□□□□ -0.69
PDGFRB-207ENST00000520579 CKAP2Q8WWK9 683 aa10.71□□□□□ -0.69
PDGFRB-207ENST00000520579 SLC35B4Q969S0 331 aa10.71□□□□□ -0.69
PDGFRB-207ENST00000520579 C10orf88Q9H8K7 445 aa10.71□□□□□ -0.69
PDGFRB-207ENST00000520579 ZBTB39O15060 712 aa10.71□□□□□ -0.69
PDGFRB-207ENST00000520579 DNAJC6O75061 913 aa10.71□□□□□ -0.69
PDGFRB-207ENST00000520579 PHF2O75151 1096 aa10.71□□□□□ -0.69
PDGFRB-207ENST00000520579 HARSP12081 509 aaKnown RBP10.71□□□□□ -0.69
PDGFRB-207ENST00000520579 PLS3P13797 630 aa10.71□□□□□ -0.69
PDGFRB-207ENST00000520579 ATF2P15336 505 aa10.71□□□□□ -0.69
PDGFRB-207ENST00000520579 CHRNB2P17787 502 aa10.71□□□□□ -0.69
PDGFRB-207ENST00000520579 MARK3P27448 753 aa10.71□□□□□ -0.69
PDGFRB-207ENST00000520579 COG7P83436 770 aa10.71□□□□□ -0.69
PDGFRB-207ENST00000520579 TSPY1Q01534 308 aa10.71□□□□□ -0.69
PDGFRB-207ENST00000520579 BTG3Q14201 252 aaPredicted RBP10.71□□□□□ -0.69
PDGFRB-207ENST00000520579 MYCT1Q8N699 235 aa10.71□□□□□ -0.69
PDGFRB-207ENST00000520579 ZNF384Q8TF68 577 aa10.71□□□□□ -0.69
PDGFRB-207ENST00000520579 RFFLQ8WZ73 363 aa10.71□□□□□ -0.69
PDGFRB-207ENST00000520579 PIGBQ92521 554 aa10.71□□□□□ -0.69
PDGFRB-207ENST00000520579 SLC5A5Q92911 643 aa10.71□□□□□ -0.69
PDGFRB-207ENST00000520579 TTC17Q96AE7 1141 aa10.71□□□□□ -0.69
PDGFRB-207ENST00000520579 AK8Q96MA6 479 aa10.71□□□□□ -0.69
PDGFRB-207ENST00000520579 TMCO1Q9UM00 188 aa10.71□□□□□ -0.69
PDGFRB-207ENST00000520579 CARD8Q9Y2G2 431 aa10.71□□□□□ -0.69
PDGFRB-207ENST00000520579 PI4K2BG5E9Z4 385 aa10.71□□□□□ -0.7
PDGFRB-207ENST00000520579 TPPPO94811 219 aa10.71□□□□□ -0.7
PDGFRB-207ENST00000520579 VHLP40337 213 aa10.71□□□□□ -0.7
PDGFRB-207ENST00000520579 ADCY7P51828 1080 aa10.71□□□□□ -0.7
PDGFRB-207ENST00000520579 MTTPP55157 894 aa10.71□□□□□ -0.7
PDGFRB-207ENST00000520579 NOP14P78316 857 aaKnown RBP10.71□□□□□ -0.7
PDGFRB-207ENST00000520579 ACAP1Q15027 740 aa10.71□□□□□ -0.7
PDGFRB-207ENST00000520579 PKN2Q16513 984 aaKnown RBP10.71□□□□□ -0.7
PDGFRB-207ENST00000520579 KCTD1Q719H9 257 aa10.71□□□□□ -0.7
PDGFRB-207ENST00000520579 PIP4K2CQ8TBX8 421 aa10.71□□□□□ -0.7
PDGFRB-207ENST00000520579 CENPTQ96BT3 561 aa10.71□□□□□ -0.7
PDGFRB-207ENST00000520579 BHMT2Q9H2M3 363 aa10.71□□□□□ -0.7
PDGFRB-207ENST00000520579 AIPL1Q9NZN9 384 aa10.71□□□□□ -0.7
PDGFRB-207ENST00000520579 HEY2Q9UBP5 337 aa10.71□□□□□ -0.7
PDGFRB-207ENST00000520579 FER1L4A9Z1Z3 1794 aa10.71□□□□□ -0.7
PDGFRB-207ENST00000520579 MEI4A8MW99 385 aa10.7□□□□□ -0.7
PDGFRB-207ENST00000520579 FOXN3O00409 490 aaPredicted RBP10.7□□□□□ -0.7
PDGFRB-207ENST00000520579 LIN7AO14910 233 aaPredicted RBP10.7□□□□□ -0.7
PDGFRB-207ENST00000520579 DDX3YO15523 660 aaKnown RBP10.7□□□□□ -0.7
PDGFRB-207ENST00000520579 TBX10O75333 385 aa10.7□□□□□ -0.7
PDGFRB-207ENST00000520579 NR3C1P04150 777 aa10.7□□□□□ -0.7
PDGFRB-207ENST00000520579 ZSCAN5DPP0CG00 497 aa10.7□□□□□ -0.7
PDGFRB-207ENST00000520579 ESRRAP11474 423 aaPredicted RBP10.7□□□□□ -0.7
PDGFRB-207ENST00000520579 RASA1P20936 1047 aa10.7□□□□□ -0.7
PDGFRB-207ENST00000520579 FGFR2P21802 821 aa10.7□□□□□ -0.7
PDGFRB-207ENST00000520579 AMPD1P23109 780 aa10.7□□□□□ -0.7
PDGFRB-207ENST00000520579 WDR4P57081 412 aaKnown RBP10.7□□□□□ -0.7
PDGFRB-207ENST00000520579 IRF5Q13568 498 aa10.7□□□□□ -0.7
PDGFRB-207ENST00000520579 LRP8Q14114 963 aa10.7□□□□□ -0.7
PDGFRB-207ENST00000520579 USH1GQ495M9 461 aa10.7□□□□□ -0.7
PDGFRB-207ENST00000520579 CCDC152Q4G0S7 254 aa10.7□□□□□ -0.7
PDGFRB-207ENST00000520579 ACSBG2Q5FVE4 666 aa10.7□□□□□ -0.7
PDGFRB-207ENST00000520579 RIBC1Q8N443 379 aaPredicted RBP10.7□□□□□ -0.7
PDGFRB-207ENST00000520579 RBBP8NLQ8NC74 664 aaPredicted RBP10.7□□□□□ -0.7
PDGFRB-207ENST00000520579 ASAP3Q8TDY4 903 aa10.7□□□□□ -0.7
PDGFRB-207ENST00000520579 NRG4Q8WWG1 115 aa10.7□□□□□ -0.7
PDGFRB-207ENST00000520579 RUSC1Q9BVN2 902 aa10.7□□□□□ -0.7
PDGFRB-207ENST00000520579 DMAP1Q9NPF5 467 aaPredicted RBP10.7□□□□□ -0.7
PDGFRB-207ENST00000520579 ARL8BQ9NVJ2 186 aa10.7□□□□□ -0.7
PDGFRB-207ENST00000520579 ARIH1Q9Y4X5 557 aaPredicted RBP10.7□□□□□ -0.7
PDGFRB-207ENST00000520579 UBR1Q8IWV7 1749 aa10.7□□□□□ -0.7
PDGFRB-207ENST00000520579 GOLGA8IPA6NC78 632 aa10.7□□□□□ -0.7
PDGFRB-207ENST00000520579 GOLGA8JA6NMD2 632 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms