RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 GAGE12BA1L429 117 aa5.23□□□□□ -1.57
SQLE-204ENST00000520493 GAGE12HA6NDE8 117 aa5.23□□□□□ -1.57
SQLE-204ENST00000520493 KRTAP29-1A8MX34 341 aaPredicted RBP5.23□□□□□ -1.57
SQLE-204ENST00000520493 RNASET2O00584 256 aaKnown RBP5.23□□□□□ -1.57
SQLE-204ENST00000520493 ERC2O15083 957 aa5.23□□□□□ -1.57
SQLE-204ENST00000520493 PLIN1O60240 522 aa5.23□□□□□ -1.57
SQLE-204ENST00000520493 PEX14O75381 377 aa5.23□□□□□ -1.57
SQLE-204ENST00000520493 RHOBTB3O94955 611 aa5.23□□□□□ -1.57
SQLE-204ENST00000520493 KRT18P05783 430 aaKnown RBP5.23□□□□□ -1.57
SQLE-204ENST00000520493 MYL1P05976 194 aa5.23□□□□□ -1.57
SQLE-204ENST00000520493 AKAP5P24588 427 aa5.23□□□□□ -1.57
SQLE-204ENST00000520493 ECHS1P30084 290 aa5.23□□□□□ -1.57
SQLE-204ENST00000520493 PTPN7P35236 360 aa5.23□□□□□ -1.57
SQLE-204ENST00000520493 FLT3LGP49771 235 aa5.23□□□□□ -1.57
SQLE-204ENST00000520493 SCAND1P57086 179 aa5.23□□□□□ -1.57
SQLE-204ENST00000520493 MXRA7P84157 204 aa5.23□□□□□ -1.57
SQLE-204ENST00000520493 PCBP2Q15366 365 aaKnown RBP eCLIP5.23□□□□□ -1.57
SQLE-204ENST00000520493 MST1LQ2TV78 715 aa5.23□□□□□ -1.57
SQLE-204ENST00000520493 LAIR1Q6GTX8 287 aa5.23□□□□□ -1.57
SQLE-204ENST00000520493 ZNF627Q7L945 461 aa5.23□□□□□ -1.57
SQLE-204ENST00000520493 GPRIN1Q7Z2K8 1008 aa5.23□□□□□ -1.57
SQLE-204ENST00000520493 C14orf80Q86SX3 495 aa5.23□□□□□ -1.57
SQLE-204ENST00000520493 PLXDC1Q8IUK5 500 aa5.23□□□□□ -1.57
SQLE-204ENST00000520493 SMC5Q8IY18 1101 aa5.23□□□□□ -1.57
SQLE-204ENST00000520493 CMTR2Q8IYT2 770 aaKnown RBP5.23□□□□□ -1.57
SQLE-204ENST00000520493 FATE1Q969F0 183 aa5.23□□□□□ -1.57
SQLE-204ENST00000520493 UHRF1Q96T88 793 aaPredicted RBP5.23□□□□□ -1.57
SQLE-204ENST00000520493 IP6K2Q9UHH9 426 aa5.23□□□□□ -1.57
SQLE-204ENST00000520493 ZMYM3Q14202 1370 aa5.23□□□□□ -1.57
SQLE-204ENST00000520493 TBKBP1A7MCY6 615 aa5.22□□□□□ -1.57
SQLE-204ENST00000520493 MT-CO1P00395 513 aa5.22□□□□□ -1.57
SQLE-204ENST00000520493 HLA-DOAP06340 250 aa5.22□□□□□ -1.57
SQLE-204ENST00000520493 PER3P56645 1201 aa5.22□□□□□ -1.57
SQLE-204ENST00000520493 CCT2P78371 535 aaKnown RBP5.22□□□□□ -1.57
SQLE-204ENST00000520493 NHLH2Q02577 135 aa5.22□□□□□ -1.57
SQLE-204ENST00000520493 FSTL1Q12841 308 aa5.22□□□□□ -1.57
SQLE-204ENST00000520493 HDAC1Q13547 482 aaPredicted RBP5.22□□□□□ -1.57
SQLE-204ENST00000520493 MUM1Q2TAK8 710 aa5.22□□□□□ -1.57
SQLE-204ENST00000520493 MUM1L1Q5H9M0 696 aa5.22□□□□□ -1.57
SQLE-204ENST00000520493 EFCAB2Q5VUJ9 269 aa5.22□□□□□ -1.57
SQLE-204ENST00000520493 RHOUQ7L0Q8 258 aa5.22□□□□□ -1.57
SQLE-204ENST00000520493 DGKHQ86XP1 1220 aa5.22□□□□□ -1.57
SQLE-204ENST00000520493 GPR156Q8NFN8 814 aa5.22□□□□□ -1.57
SQLE-204ENST00000520493 TGFBRAP1Q8WUH2 860 aa5.22□□□□□ -1.57
SQLE-204ENST00000520493 RIN2Q8WYP3 895 aaPredicted RBP5.22□□□□□ -1.57
SQLE-204ENST00000520493 HSPBAP1Q96EW2 488 aa5.22□□□□□ -1.57
SQLE-204ENST00000520493 ACE2Q9BYF1 805 aaPredicted RBP5.22□□□□□ -1.57
SQLE-204ENST00000520493 BCO1Q9HAY6 547 aa5.22□□□□□ -1.57
SQLE-204ENST00000520493 IFT122Q9HBG6 1241 aa5.22□□□□□ -1.57
SQLE-204ENST00000520493 ARNT2Q9HBZ2 717 aa5.22□□□□□ -1.57
SQLE-204ENST00000520493 PRDM11Q9NQV5 511 aa5.22□□□□□ -1.57
SQLE-204ENST00000520493 ZNF277Q9NRM2 450 aaPredicted RBP5.22□□□□□ -1.57
SQLE-204ENST00000520493 DMRT1Q9Y5R6 373 aa5.22□□□□□ -1.57
SQLE-204ENST00000520493 FOXN1O15353 648 aa5.21□□□□□ -1.58
SQLE-204ENST00000520493 PJA2O43164 708 aa5.21□□□□□ -1.58
SQLE-204ENST00000520493 B3GALT2O43825 422 aa5.21□□□□□ -1.58
SQLE-204ENST00000520493 SNRPA1P09661 255 aaKnown RBP5.21□□□□□ -1.58
SQLE-204ENST00000520493 ADSLP30566 484 aaPredicted RBP5.21□□□□□ -1.58
SQLE-204ENST00000520493 RGS19P49795 217 aa5.21□□□□□ -1.58
SQLE-204ENST00000520493 SLC5A3P53794 718 aa5.21□□□□□ -1.58
SQLE-204ENST00000520493 UBE4AQ14139 1066 aa5.21□□□□□ -1.58
SQLE-204ENST00000520493 ADRM1Q16186 407 aa5.21□□□□□ -1.58
SQLE-204ENST00000520493 BMT2Q1RMZ1 405 aa5.21□□□□□ -1.58
SQLE-204ENST00000520493 ANO4Q32M45 955 aa5.21□□□□□ -1.58
SQLE-204ENST00000520493 PRAMEF14Q5SWL7 426 aa5.21□□□□□ -1.58
SQLE-204ENST00000520493 BHLHA9Q7RTU4 235 aa5.21□□□□□ -1.58
SQLE-204ENST00000520493 OR7D4Q8NG98 312 aa5.21□□□□□ -1.58
SQLE-204ENST00000520493 PMM1Q92871 262 aa5.21□□□□□ -1.58
SQLE-204ENST00000520493 MYEOVQ96EZ4 313 aa5.21□□□□□ -1.58
SQLE-204ENST00000520493 ADI1Q9BV57 179 aa5.21□□□□□ -1.58
SQLE-204ENST00000520493 REXO4Q9GZR2 422 aaKnown RBP5.21□□□□□ -1.58
SQLE-204ENST00000520493 GREM2Q9H772 168 aa5.21□□□□□ -1.58
SQLE-204ENST00000520493 AKIP1Q9NQ31 210 aa5.21□□□□□ -1.58
SQLE-204ENST00000520493 AHRRA9YTQ3 701 aa5.2□□□□□ -1.58
SQLE-204ENST00000520493 PCDHGA12O60330 932 aa5.2□□□□□ -1.58
SQLE-204ENST00000520493 PF4V1P10720 104 aa5.2□□□□□ -1.58
SQLE-204ENST00000520493 NR4A1P22736 598 aa5.2□□□□□ -1.58
SQLE-204ENST00000520493 CLRN1P58418 232 aa5.2□□□□□ -1.58
SQLE-204ENST00000520493 RNASE9P60153 205 aaKnown RBP5.2□□□□□ -1.58
SQLE-204ENST00000520493 TAP1Q03518 808 aa5.2□□□□□ -1.58
SQLE-204ENST00000520493 MAP9Q49MG5 647 aa5.2□□□□□ -1.58
SQLE-204ENST00000520493 FAM47AQ5JRC9 791 aa5.2□□□□□ -1.58
SQLE-204ENST00000520493 RRP12Q5JTH9 1297 aaKnown RBP5.2□□□□□ -1.58
SQLE-204ENST00000520493 TOR2AQ5JU69 321 aa5.2□□□□□ -1.58
SQLE-204ENST00000520493 ATXN7L2Q5T6C5 722 aaPredicted RBP5.2□□□□□ -1.58
SQLE-204ENST00000520493 LILRA3Q8N6C8 439 aaPredicted RBP5.2□□□□□ -1.58
SQLE-204ENST00000520493 RNF169Q8NCN4 708 aa5.2□□□□□ -1.58
SQLE-204ENST00000520493 TSPEARQ8WU66 669 aa5.2□□□□□ -1.58
SQLE-204ENST00000520493 CEP95Q96GE4 821 aa5.2□□□□□ -1.58
SQLE-204ENST00000520493 MLST8Q9BVC4 326 aa5.2□□□□□ -1.58
SQLE-204ENST00000520493 ZNF768Q9H5H4 540 aaKnown RBP5.2□□□□□ -1.58
SQLE-204ENST00000520493 CYP4F11Q9HBI6 524 aa5.2□□□□□ -1.58
SQLE-204ENST00000520493 RBM12Q9NTZ6 932 aaKnown RBP5.2□□□□□ -1.58
SQLE-204ENST00000520493 CCM2LQ9NUG4 571 aaPredicted RBP5.2□□□□□ -1.58
SQLE-204ENST00000520493 DNAJC28Q9NX36 388 aa5.2□□□□□ -1.58
SQLE-204ENST00000520493 OBP2AQ9NY56 170 aa5.2□□□□□ -1.58
SQLE-204ENST00000520493 MOCS1Q9NZB8 636 aa5.2□□□□□ -1.58
SQLE-204ENST00000520493 PCDHGA9Q9Y5G4 932 aaKnown RBP5.2□□□□□ -1.58
SQLE-204ENST00000520493 PCDHGA8Q9Y5G5 932 aa5.2□□□□□ -1.58
SQLE-204ENST00000520493 PCDHGA7Q9Y5G6 932 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms