RNA–Protein interactions for RNA: ENST00000520158.5

CTNNA1-219, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 719 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-219ENST00000520158 NTPCRQ9BSD7 190 aaKnown RBP6.24□□□□□ -1.41
CTNNA1-219ENST00000520158 TRIM6Q9C030 488 aaPredicted RBP6.24□□□□□ -1.41
CTNNA1-219ENST00000520158 POLR3FQ9H1D9 316 aaPredicted RBP6.24□□□□□ -1.41
CTNNA1-219ENST00000520158 SMOC2Q9H3U7 446 aa6.24□□□□□ -1.41
CTNNA1-219ENST00000520158 PDZD7Q9H5P4 517 aa6.24□□□□□ -1.41
CTNNA1-219ENST00000520158 SLC2A4RGQ9NR83 387 aa6.24□□□□□ -1.41
CTNNA1-219ENST00000520158 PRG3Q9Y2Y8 225 aaPredicted RBP6.24□□□□□ -1.41
CTNNA1-219ENST00000520158 CLUHO75153 1309 aa6.24□□□□□ -1.41
CTNNA1-219ENST00000520158 SF3B1O75533 1304 aaKnown RBP eCLIP6.24□□□□□ -1.414e-6■■■■■ 92.3
CTNNA1-219ENST00000520158 HMGB1P1B2RPK0 211 aaPredicted RBP6.23□□□□□ -1.41
CTNNA1-219ENST00000520158 F8W810 466 aa6.23□□□□□ -1.41
CTNNA1-219ENST00000520158 H0Y858 1186 aa6.23□□□□□ -1.41
CTNNA1-219ENST00000520158 LAD1O00515 517 aa6.23□□□□□ -1.41
CTNNA1-219ENST00000520158 C2CD2LO14523 706 aa6.23□□□□□ -1.41
CTNNA1-219ENST00000520158 USO1O60763 962 aaKnown RBP6.23□□□□□ -1.41
CTNNA1-219ENST00000520158 DTNBO60941 627 aa6.23□□□□□ -1.41
CTNNA1-219ENST00000520158 TADA2AO75478 443 aa6.23□□□□□ -1.41
CTNNA1-219ENST00000520158 ZRANB2O95218 330 aaKnown RBP eCLIP6.23□□□□□ -1.41
CTNNA1-219ENST00000520158 NPTXRO95502 500 aa6.23□□□□□ -1.41
CTNNA1-219ENST00000520158 SSBP05455 408 aaKnown RBP eCLIP6.23□□□□□ -1.41
CTNNA1-219ENST00000520158 THP07101 528 aa6.23□□□□□ -1.41
CTNNA1-219ENST00000520158 OR52Z1P0C646 297 aa6.23□□□□□ -1.41
CTNNA1-219ENST00000520158 SRFP11831 508 aa6.23□□□□□ -1.41
CTNNA1-219ENST00000520158 LAMP2P13473 410 aa6.23□□□□□ -1.41
CTNNA1-219ENST00000520158 FGFR3P22607 806 aa6.23□□□□□ -1.41
CTNNA1-219ENST00000520158 SP100P23497 879 aaPredicted RBP6.23□□□□□ -1.41
CTNNA1-219ENST00000520158 MCM7P33993 719 aa6.23□□□□□ -1.41
CTNNA1-219ENST00000520158 CA8P35219 290 aa6.23□□□□□ -1.41
CTNNA1-219ENST00000520158 CLCN1P35523 988 aa6.23□□□□□ -1.41
CTNNA1-219ENST00000520158 HMGN5P82970 282 aaKnown RBP6.23□□□□□ -1.41
CTNNA1-219ENST00000520158 PRPF4BQ13523 1007 aaKnown RBP6.23□□□□□ -1.41
CTNNA1-219ENST00000520158 RAB33AQ14088 237 aa6.23□□□□□ -1.41
CTNNA1-219ENST00000520158 SAFBQ15424 915 aaKnown RBP eCLIP6.23□□□□□ -1.41
CTNNA1-219ENST00000520158 HAUS3Q68CZ6 603 aa6.23□□□□□ -1.41
CTNNA1-219ENST00000520158 DCLRE1AQ6PJP8 1040 aa6.23□□□□□ -1.41
CTNNA1-219ENST00000520158 CD300LGQ6UXG3 332 aa6.23□□□□□ -1.41
CTNNA1-219ENST00000520158 NOSTRINQ8IVI9 506 aa6.23□□□□□ -1.41
CTNNA1-219ENST00000520158 CACTIN-AS1Q8N1I8 211 aa6.23□□□□□ -1.41
CTNNA1-219ENST00000520158 IGSF22Q8N9C0 903 aa6.23□□□□□ -1.41
CTNNA1-219ENST00000520158 CXorf38Q8TB03 319 aa6.23□□□□□ -1.41
CTNNA1-219ENST00000520158 RNF217Q8TC41 542 aa6.23□□□□□ -1.41
CTNNA1-219ENST00000520158 BSNDQ8WZ55 320 aa6.23□□□□□ -1.41
CTNNA1-219ENST00000520158 SMG7Q92540 1137 aaKnown RBP6.23□□□□□ -1.41
CTNNA1-219ENST00000520158 KIFAP3Q92845 792 aa6.23□□□□□ -1.41
CTNNA1-219ENST00000520158 ATOH1Q92858 354 aaPredicted RBP6.23□□□□□ -1.41
CTNNA1-219ENST00000520158 UROC1Q96N76 676 aa6.23□□□□□ -1.41
CTNNA1-219ENST00000520158 PPP1R10Q96QC0 940 aaKnown RBP6.23□□□□□ -1.41
CTNNA1-219ENST00000520158 MYADMQ96S97 322 aa6.23□□□□□ -1.41
CTNNA1-219ENST00000520158 PAAF1Q9BRP4 392 aa6.23□□□□□ -1.41
CTNNA1-219ENST00000520158 TTPALQ9BTX7 342 aa6.23□□□□□ -1.41
CTNNA1-219ENST00000520158 SEMA4AQ9H3S1 761 aa6.23□□□□□ -1.41
CTNNA1-219ENST00000520158 TMEM134Q9H6X4 195 aa6.23□□□□□ -1.41
CTNNA1-219ENST00000520158 C17orf75Q9HAS0 396 aa6.23□□□□□ -1.41
CTNNA1-219ENST00000520158 PTPRHQ9HD43 1115 aa6.23□□□□□ -1.41
CTNNA1-219ENST00000520158 GPRC5CQ9NQ84 441 aa6.23□□□□□ -1.41
CTNNA1-219ENST00000520158 PARP2Q9UGN5 583 aa6.23□□□□□ -1.41
CTNNA1-219ENST00000520158 FBXW11Q9UKB1 542 aa6.23□□□□□ -1.41
CTNNA1-219ENST00000520158 TNFSF13BQ9Y275 285 aa6.23□□□□□ -1.41
CTNNA1-219ENST00000520158 BACE2Q9Y5Z0 518 aa6.23□□□□□ -1.41
CTNNA1-219ENST00000520158 VWA8A3KMH1 1905 aa6.23□□□□□ -1.41
CTNNA1-219ENST00000520158 PHLPP2Q6ZVD8 1323 aa6.23□□□□□ -1.41
CTNNA1-219ENST00000520158 TRIP11Q15643 1979 aa6.22□□□□□ -1.41
CTNNA1-219ENST00000520158 DOCK6Q96HP0 2047 aa6.22□□□□□ -1.41
CTNNA1-219ENST00000520158 NOTCH4Q99466 2003 aa6.22□□□□□ -1.41
CTNNA1-219ENST00000520158 A0A087WWV3 80 aa6.22□□□□□ -1.41
CTNNA1-219ENST00000520158 LRRIQ4A6NIV6 560 aa6.22□□□□□ -1.41
CTNNA1-219ENST00000520158 PI15O43692 258 aa6.22□□□□□ -1.41
CTNNA1-219ENST00000520158 TBC1D4O60343 1298 aa6.22□□□□□ -1.41
CTNNA1-219ENST00000520158 GFRA3O60609 400 aa6.22□□□□□ -1.41
CTNNA1-219ENST00000520158 RFPL2O75678 378 aa6.22□□□□□ -1.41
CTNNA1-219ENST00000520158 KIF4AO95239 1232 aa6.22□□□□□ -1.41
CTNNA1-219ENST00000520158 EDN1P05305 212 aa6.22□□□□□ -1.41
CTNNA1-219ENST00000520158 PRKCBP05771 671 aa6.22□□□□□ -1.41
CTNNA1-219ENST00000520158 LIG1P18858 919 aa6.22□□□□□ -1.41
CTNNA1-219ENST00000520158 PROZP22891 400 aa6.22□□□□□ -1.41
CTNNA1-219ENST00000520158 PRPHP41219 470 aa6.22□□□□□ -1.41
CTNNA1-219ENST00000520158 TOB1P50616 345 aaPredicted RBP6.22□□□□□ -1.41
CTNNA1-219ENST00000520158 STARD6P59095 220 aa6.22□□□□□ -1.41
CTNNA1-219ENST00000520158 HTR4Q13639 388 aa6.22□□□□□ -1.41
CTNNA1-219ENST00000520158 MRPL58Q14197 206 aaKnown RBP6.22□□□□□ -1.41
CTNNA1-219ENST00000520158 ZRSR2Q15696 482 aaKnown RBP6.22□□□□□ -1.41
CTNNA1-219ENST00000520158 ZNF174Q15697 407 aa6.22□□□□□ -1.41
CTNNA1-219ENST00000520158 ECM1Q16610 540 aa6.22□□□□□ -1.41
CTNNA1-219ENST00000520158 UPP1Q16831 310 aa6.22□□□□□ -1.41
CTNNA1-219ENST00000520158 DCAF4L1Q3SXM0 396 aa6.22□□□□□ -1.41
CTNNA1-219ENST00000520158 RTP2Q5QGT7 225 aa6.22□□□□□ -1.41
CTNNA1-219ENST00000520158 TTC38Q5R3I4 469 aa6.22□□□□□ -1.41
CTNNA1-219ENST00000520158 HYIQ5T013 277 aa6.22□□□□□ -1.41
CTNNA1-219ENST00000520158 NT5DC1Q5TFE4 455 aa6.22□□□□□ -1.41
CTNNA1-219ENST00000520158 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.22□□□□□ -1.41
CTNNA1-219ENST00000520158 MTERF4Q7Z6M4 381 aaKnown RBP6.22□□□□□ -1.41
CTNNA1-219ENST00000520158 CDR2LQ86X02 465 aaPredicted RBP6.22□□□□□ -1.41
CTNNA1-219ENST00000520158 PALB2Q86YC2 1186 aa6.22□□□□□ -1.41
CTNNA1-219ENST00000520158 CCDC105Q8IYK2 499 aa6.22□□□□□ -1.41
CTNNA1-219ENST00000520158 DTWD2Q8NBA8 298 aa6.22□□□□□ -1.41
CTNNA1-219ENST00000520158 RIN2Q8WYP3 895 aaPredicted RBP6.22□□□□□ -1.41
CTNNA1-219ENST00000520158 ITFG2Q969R8 447 aa6.22□□□□□ -1.41
CTNNA1-219ENST00000520158 DDX27Q96GQ7 796 aaKnown RBP6.22□□□□□ -1.41
CTNNA1-219ENST00000520158 C8orf76Q96K31 380 aa6.22□□□□□ -1.41
CTNNA1-219ENST00000520158 CCDC43Q96MW1 224 aaKnown RBP6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms