RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 MYRIPQ8NFW9 859 aa6.48□□□□□ -1.37
HMGB1P46-201ENST00000520062 SPATA25Q9BR10 227 aa6.48□□□□□ -1.37
HMGB1P46-201ENST00000520062 CRB3Q9BUF7 120 aa6.48□□□□□ -1.37
HMGB1P46-201ENST00000520062 TRIM54Q9BYV2 358 aa6.48□□□□□ -1.37
HMGB1P46-201ENST00000520062 DPH1Q9BZG8 443 aa6.48□□□□□ -1.37
HMGB1P46-201ENST00000520062 C11orf54Q9H0W9 315 aaPredicted RBP6.48□□□□□ -1.37
HMGB1P46-201ENST00000520062 VPS11Q9H270 941 aa6.48□□□□□ -1.37
HMGB1P46-201ENST00000520062 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.48□□□□□ -1.37
HMGB1P46-201ENST00000520062 AFF4Q9UHB7 1163 aaKnown RBP6.48□□□□□ -1.37
HMGB1P46-201ENST00000520062 CPA4Q9UI42 421 aa6.48□□□□□ -1.37
HMGB1P46-201ENST00000520062 PCDHA6Q9UN73 950 aa6.48□□□□□ -1.37
HMGB1P46-201ENST00000520062 PCDHA1Q9Y5I3 950 aa6.48□□□□□ -1.37
HMGB1P46-201ENST00000520062 ACTL7AQ9Y615 435 aa6.48□□□□□ -1.37
HMGB1P46-201ENST00000520062 POM121BA6NF01 834 aa6.47□□□□□ -1.37
HMGB1P46-201ENST00000520062 FGF18O76093 207 aa6.47□□□□□ -1.37
HMGB1P46-201ENST00000520062 CYP1A1P04798 512 aaPredicted RBP6.47□□□□□ -1.37
HMGB1P46-201ENST00000520062 CD1AP06126 327 aa6.47□□□□□ -1.37
HMGB1P46-201ENST00000520062 ZNF888P0CJ79 500 aaPredicted RBP6.47□□□□□ -1.37
HMGB1P46-201ENST00000520062 MED14OSP0DP75 135 aa6.47□□□□□ -1.37
HMGB1P46-201ENST00000520062 FPR1P21462 350 aa6.47□□□□□ -1.37
HMGB1P46-201ENST00000520062 PPM1AP35813 382 aa6.47□□□□□ -1.37
HMGB1P46-201ENST00000520062 HALP42357 657 aa6.47□□□□□ -1.37
HMGB1P46-201ENST00000520062 PIK3CGP48736 1102 aa6.47□□□□□ -1.37
HMGB1P46-201ENST00000520062 RRADP55042 308 aa6.47□□□□□ -1.37
HMGB1P46-201ENST00000520062 ADAM8P78325 824 aa6.47□□□□□ -1.37
HMGB1P46-201ENST00000520062 PTH1RQ03431 593 aa6.47□□□□□ -1.37
HMGB1P46-201ENST00000520062 HGFACQ04756 655 aa6.47□□□□□ -1.37
HMGB1P46-201ENST00000520062 PDCD2Q16342 344 aaPredicted RBP6.47□□□□□ -1.37
HMGB1P46-201ENST00000520062 PABPC1LQ4VXU2 614 aaKnown RBP6.47□□□□□ -1.37
HMGB1P46-201ENST00000520062 KRT40Q6A162 431 aa6.47□□□□□ -1.37
HMGB1P46-201ENST00000520062 SESTD1Q86VW0 696 aa6.47□□□□□ -1.37
HMGB1P46-201ENST00000520062 ZDHHC14Q8IZN3 488 aa6.47□□□□□ -1.37
HMGB1P46-201ENST00000520062 RNF152Q8N8N0 203 aa6.47□□□□□ -1.37
HMGB1P46-201ENST00000520062 DCBLD1Q8N8Z6 715 aa6.47□□□□□ -1.37
HMGB1P46-201ENST00000520062 REPS2Q8NFH8 660 aa6.47□□□□□ -1.37
HMGB1P46-201ENST00000520062 IL17RDQ8NFM7 739 aa6.47□□□□□ -1.37
HMGB1P46-201ENST00000520062 NMD3Q96D46 503 aaKnown RBP6.47□□□□□ -1.37
HMGB1P46-201ENST00000520062 PWWP2AQ96N64 755 aa6.47□□□□□ -1.37
HMGB1P46-201ENST00000520062 ENKD1Q9H0I2 346 aa6.47□□□□□ -1.37
HMGB1P46-201ENST00000520062 RLIMQ9NVW2 624 aa6.47□□□□□ -1.37
HMGB1P46-201ENST00000520062 MED16Q9Y2X0 877 aa6.47□□□□□ -1.37
HMGB1P46-201ENST00000520062 NCK2O43639 380 aa6.46□□□□□ -1.38
HMGB1P46-201ENST00000520062 PARP1P09874 1014 aaKnown RBP6.46□□□□□ -1.38
HMGB1P46-201ENST00000520062 MTHFD1P11586 935 aaKnown RBP6.46□□□□□ -1.38
HMGB1P46-201ENST00000520062 IL6STP40189 918 aaPredicted RBP6.46□□□□□ -1.38
HMGB1P46-201ENST00000520062 ALDH1A3P47895 512 aa6.46□□□□□ -1.38
HMGB1P46-201ENST00000520062 SARSP49591 514 aaKnown RBP6.46□□□□□ -1.38
HMGB1P46-201ENST00000520062 IRAK1P51617 712 aa6.46□□□□□ -1.38
HMGB1P46-201ENST00000520062 SUMO3P55854 103 aaPredicted RBP6.46□□□□□ -1.38
HMGB1P46-201ENST00000520062 SOX8P57073 446 aa6.46□□□□□ -1.38
HMGB1P46-201ENST00000520062 ATP2C1P98194 919 aaPredicted RBP6.46□□□□□ -1.38
HMGB1P46-201ENST00000520062 CREMQ03060 361 aa6.46□□□□□ -1.38
HMGB1P46-201ENST00000520062 SEM1Q6ZVN7 128 aa6.46□□□□□ -1.38
HMGB1P46-201ENST00000520062 GPR155Q7Z3F1 870 aa6.46□□□□□ -1.38
HMGB1P46-201ENST00000520062 NBPF11Q86T75 865 aa6.46□□□□□ -1.38
HMGB1P46-201ENST00000520062 SKAP1Q86WV1 359 aa6.46□□□□□ -1.38
HMGB1P46-201ENST00000520062 CMTM4Q8IZR5 234 aa6.46□□□□□ -1.38
HMGB1P46-201ENST00000520062 NKAPQ8N5F7 415 aaKnown RBP6.46□□□□□ -1.38
HMGB1P46-201ENST00000520062 ANKRD53Q8N9V6 530 aa6.46□□□□□ -1.38
HMGB1P46-201ENST00000520062 MDM1Q8TC05 714 aa6.46□□□□□ -1.38
HMGB1P46-201ENST00000520062 RABGGTAQ92696 567 aa6.46□□□□□ -1.38
HMGB1P46-201ENST00000520062 KIAA1191Q96A73 305 aa6.46□□□□□ -1.38
HMGB1P46-201ENST00000520062 ARL8AQ96BM9 186 aa6.46□□□□□ -1.38
HMGB1P46-201ENST00000520062 EVI5LQ96CN4 794 aa6.46□□□□□ -1.38
HMGB1P46-201ENST00000520062 BRIP1Q9BX63 1249 aa6.46□□□□□ -1.38
HMGB1P46-201ENST00000520062 UBA5Q9GZZ9 404 aa6.46□□□□□ -1.38
HMGB1P46-201ENST00000520062 MSL2Q9HCI7 577 aa6.46□□□□□ -1.38
HMGB1P46-201ENST00000520062 CPNE7Q9UBL6 633 aa6.46□□□□□ -1.38
HMGB1P46-201ENST00000520062 RGS17Q9UGC6 210 aaPredicted RBP6.46□□□□□ -1.38
HMGB1P46-201ENST00000520062 ETV2O00321 342 aaPredicted RBP6.45□□□□□ -1.38
HMGB1P46-201ENST00000520062 ARHGAP6O43182 974 aa6.45□□□□□ -1.38
HMGB1P46-201ENST00000520062 NBNO60934 754 aa6.45□□□□□ -1.38
HMGB1P46-201ENST00000520062 MATN4O95460 622 aa6.45□□□□□ -1.38
HMGB1P46-201ENST00000520062 GNAI3P08754 354 aa6.45□□□□□ -1.38
HMGB1P46-201ENST00000520062 ABCB4P21439 1286 aa6.45□□□□□ -1.38
HMGB1P46-201ENST00000520062 PAX3P23760 479 aa6.45□□□□□ -1.38
HMGB1P46-201ENST00000520062 CASRP41180 1078 aa6.45□□□□□ -1.38
HMGB1P46-201ENST00000520062 GZMKP49863 264 aa6.45□□□□□ -1.38
HMGB1P46-201ENST00000520062 GNAI1P63096 354 aa6.45□□□□□ -1.38
HMGB1P46-201ENST00000520062 AFMIDQ63HM1 303 aa6.45□□□□□ -1.38
HMGB1P46-201ENST00000520062 RALYLQ86SE5 291 aaKnown RBP6.45□□□□□ -1.38
HMGB1P46-201ENST00000520062 TXNDC5Q8NBS9 432 aaKnown RBP6.45□□□□□ -1.38
HMGB1P46-201ENST00000520062 OR10H5Q8NGA6 315 aa6.45□□□□□ -1.38
HMGB1P46-201ENST00000520062 OR6B3Q8NGW1 331 aa6.45□□□□□ -1.38
HMGB1P46-201ENST00000520062 ATXN2LQ8WWM7 1075 aaKnown RBP6.45□□□□□ -1.38
HMGB1P46-201ENST00000520062 STON2Q8WXE9 905 aa6.45□□□□□ -1.38
HMGB1P46-201ENST00000520062 TMEM41AQ96HV5 264 aa6.45□□□□□ -1.38
HMGB1P46-201ENST00000520062 SERHLQ9NQF3 203 aa6.45□□□□□ -1.38
HMGB1P46-201ENST00000520062 STK32BQ9NY57 414 aa6.45□□□□□ -1.38
HMGB1P46-201ENST00000520062 A0A1W2PPC4 97 aa6.44□□□□□ -1.38
HMGB1P46-201ENST00000520062 TRIM43BA6NCK2 446 aa6.44□□□□□ -1.38
HMGB1P46-201ENST00000520062 RFXAPO00287 272 aa6.44□□□□□ -1.38
HMGB1P46-201ENST00000520062 APOL1O14791 398 aa6.44□□□□□ -1.38
HMGB1P46-201ENST00000520062 ADAMTS3O15072 1205 aa6.44□□□□□ -1.38
HMGB1P46-201ENST00000520062 GRM6O15303 877 aa6.44□□□□□ -1.38
HMGB1P46-201ENST00000520062 PJA2O43164 708 aa6.44□□□□□ -1.38
HMGB1P46-201ENST00000520062 PIP5K1CO60331 668 aa6.44□□□□□ -1.38
HMGB1P46-201ENST00000520062 SASH1O94885 1247 aa6.44□□□□□ -1.38
HMGB1P46-201ENST00000520062 AHSGP02765 367 aa6.44□□□□□ -1.38
HMGB1P46-201ENST00000520062 APBA1Q02410 837 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms