RNA–Protein interactions for RNA: ENST00000519661.5

SPIDR-212, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,035 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-212ENST00000519661 CCDC34Q96HJ3 373 aa12.56□□□□□ -0.4
SPIDR-212ENST00000519661 FAM193BQ96PV7 902 aaPredicted RBP12.56□□□□□ -0.4
SPIDR-212ENST00000519661 TCF25Q9BQ70 676 aa12.56□□□□□ -0.4
SPIDR-212ENST00000519661 MSTO1Q9BUK6 570 aa12.56□□□□□ -0.4
SPIDR-212ENST00000519661 APOL6Q9BWW8 343 aa12.56□□□□□ -0.4
SPIDR-212ENST00000519661 RHOBTB2Q9BYZ6 727 aa12.56□□□□□ -0.4
SPIDR-212ENST00000519661 GTPBP4Q9BZE4 634 aaKnown RBP12.56□□□□□ -0.4
SPIDR-212ENST00000519661 GBP3Q9H0R5 595 aa12.56□□□□□ -0.4
SPIDR-212ENST00000519661 KLK14Q9P0G3 267 aa12.56□□□□□ -0.4
SPIDR-212ENST00000519661 THEGQ9P2T0 379 aa12.56□□□□□ -0.4
SPIDR-212ENST00000519661 AGO2Q9UKV8 859 aaKnown RBP12.56□□□□□ -0.4
SPIDR-212ENST00000519661 SSX2IPQ9Y2D8 614 aa12.56□□□□□ -0.4
SPIDR-212ENST00000519661 GDAQ9Y2T3 454 aa12.56□□□□□ -0.4
SPIDR-212ENST00000519661 TISP43B9A030 160 aa12.55□□□□□ -0.4
SPIDR-212ENST00000519661 CXCL8P10145 99 aa12.55□□□□□ -0.4
SPIDR-212ENST00000519661 CASP1P29466 404 aa12.55□□□□□ -0.4
SPIDR-212ENST00000519661 TNFSF9P41273 254 aa12.55□□□□□ -0.4
SPIDR-212ENST00000519661 AFMP43652 599 aa12.55□□□□□ -0.4
SPIDR-212ENST00000519661 ENPEPQ07075 957 aa12.55□□□□□ -0.4
SPIDR-212ENST00000519661 STK4Q13043 487 aa12.55□□□□□ -0.4
SPIDR-212ENST00000519661 KNOP1Q1ED39 458 aaKnown RBP12.55□□□□□ -0.4
SPIDR-212ENST00000519661 LEXMQ3ZCV2 418 aa12.55□□□□□ -0.4
SPIDR-212ENST00000519661 KMT5BQ4FZB7 885 aa12.55□□□□□ -0.4
SPIDR-212ENST00000519661 ZBTB41Q5SVQ8 909 aa12.55□□□□□ -0.4
SPIDR-212ENST00000519661 SPATA1Q5VX52 437 aa12.55□□□□□ -0.4
SPIDR-212ENST00000519661 FOXR2Q6PJQ5 311 aa12.55□□□□□ -0.4
SPIDR-212ENST00000519661 ZBTB33Q86T24 672 aa12.55□□□□□ -0.4
SPIDR-212ENST00000519661 BRSK2Q8IWQ3 736 aa12.55□□□□□ -0.4
SPIDR-212ENST00000519661 VPS52Q8N1B4 723 aa12.55□□□□□ -0.4
SPIDR-212ENST00000519661 GOLGA5Q8TBA6 731 aa12.55□□□□□ -0.4
SPIDR-212ENST00000519661 HLA-CQ95604 372 aa12.55□□□□□ -0.4
SPIDR-212ENST00000519661 MSLNLQ96KJ4 702 aa12.55□□□□□ -0.4
SPIDR-212ENST00000519661 GSDMAQ96QA5 445 aa12.55□□□□□ -0.4
SPIDR-212ENST00000519661 PAAF1Q9BRP4 392 aa12.55□□□□□ -0.4
SPIDR-212ENST00000519661 BLZF1Q9H2G9 400 aa12.55□□□□□ -0.4
SPIDR-212ENST00000519661 KCTD10Q9H3F6 313 aa12.55□□□□□ -0.4
SPIDR-212ENST00000519661 KIAA1586Q9HCI6 787 aa12.55□□□□□ -0.4
SPIDR-212ENST00000519661 AGPAT3Q9NRZ7 376 aa12.55□□□□□ -0.4
SPIDR-212ENST00000519661 DMAC2Q9NW81 257 aa12.55□□□□□ -0.4
SPIDR-212ENST00000519661 FNIP2Q9P278 1114 aa12.55□□□□□ -0.4
SPIDR-212ENST00000519661 UBQLN1Q9UMX0 589 aaKnown RBP12.55□□□□□ -0.4
SPIDR-212ENST00000519661 SF3B1O75533 1304 aaKnown RBP eCLIP12.55□□□□□ -0.43e-8■■■■■ 109.8
SPIDR-212ENST00000519661 TDRD15B5MCY1 1934 aaKnown RBP12.54□□□□□ -0.4
SPIDR-212ENST00000519661 MUC3AQ02505 3323 aa12.54□□□□□ -0.4
SPIDR-212ENST00000519661 ANO9A1A5B4 782 aa12.54□□□□□ -0.4
SPIDR-212ENST00000519661 HIDE1A8MVS5 230 aa12.54□□□□□ -0.4
SPIDR-212ENST00000519661 NT5C1B-RDH14C9J2C7 533 aa12.54□□□□□ -0.4
SPIDR-212ENST00000519661 PDXKO00764 312 aa12.54□□□□□ -0.4
SPIDR-212ENST00000519661 EXTL3O43909 919 aa12.54□□□□□ -0.4
SPIDR-212ENST00000519661 PRPF6O94906 941 aaKnown RBP12.54□□□□□ -0.4
SPIDR-212ENST00000519661 KIF4AO95239 1232 aa12.54□□□□□ -0.4
SPIDR-212ENST00000519661 IL18RAPO95256 599 aa12.54□□□□□ -0.4
SPIDR-212ENST00000519661 GLP2RO95838 553 aa12.54□□□□□ -0.4
SPIDR-212ENST00000519661 RPN1P04843 607 aaKnown RBP12.54□□□□□ -0.4
SPIDR-212ENST00000519661 IBSPP21815 317 aaPredicted RBP12.54□□□□□ -0.4
SPIDR-212ENST00000519661 FGFR3P22607 806 aa12.54□□□□□ -0.4
SPIDR-212ENST00000519661 CREMQ03060 361 aa12.54□□□□□ -0.4
SPIDR-212ENST00000519661 PPP2R3AQ06190 1150 aa12.54□□□□□ -0.4
SPIDR-212ENST00000519661 BMS1Q14692 1282 aaKnown RBP12.54□□□□□ -0.4
SPIDR-212ENST00000519661 AAK1Q2M2I8 961 aa12.54□□□□□ -0.4
SPIDR-212ENST00000519661 FUT10Q6P4F1 479 aa12.54□□□□□ -0.4
SPIDR-212ENST00000519661 ADGRD2Q7Z7M1 963 aa12.54□□□□□ -0.4
SPIDR-212ENST00000519661 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.54□□□□□ -0.4
SPIDR-212ENST00000519661 GRAMD1CQ8IYS0 662 aa12.54□□□□□ -0.4
SPIDR-212ENST00000519661 GUF1Q8N442 669 aaKnown RBP12.54□□□□□ -0.4
SPIDR-212ENST00000519661 CXorf38Q8TB03 319 aa12.54□□□□□ -0.4
SPIDR-212ENST00000519661 PIK3R5Q8WYR1 880 aa12.54□□□□□ -0.4
SPIDR-212ENST00000519661 HPS3Q969F9 1004 aa12.54□□□□□ -0.4
SPIDR-212ENST00000519661 IPO9Q96P70 1041 aaKnown RBP12.54□□□□□ -0.4
SPIDR-212ENST00000519661 GPR62Q9BZJ7 368 aa12.54□□□□□ -0.4
SPIDR-212ENST00000519661 IKZF4Q9H2S9 585 aa12.54□□□□□ -0.4
SPIDR-212ENST00000519661 UBE2ZQ9H832 354 aaPredicted RBP12.54□□□□□ -0.4
SPIDR-212ENST00000519661 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.54□□□□□ -0.4
SPIDR-212ENST00000519661 TBC1D7Q9P0N9 293 aa12.54□□□□□ -0.4
SPIDR-212ENST00000519661 TRAF3IP3Q9Y228 551 aa12.54□□□□□ -0.4
SPIDR-212ENST00000519661 PDCD11Q14690 1871 aaKnown RBP12.54□□□□□ -0.4
SPIDR-212ENST00000519661 CUL9Q8IWT3 2517 aa12.54□□□□□ -0.4
SPIDR-212ENST00000519661 NCOR1O75376 2440 aa12.53□□□□□ -0.4
SPIDR-212ENST00000519661 GOLGA6L4A6NEF3 574 aa12.53□□□□□ -0.4
SPIDR-212ENST00000519661 LACTBL1A8MY62 500 aa12.53□□□□□ -0.4
SPIDR-212ENST00000519661 F8W810 466 aa12.53□□□□□ -0.4
SPIDR-212ENST00000519661 SYN3O14994 580 aa12.53□□□□□ -0.4
SPIDR-212ENST00000519661 MAPK13O15264 365 aa12.53□□□□□ -0.4
SPIDR-212ENST00000519661 XPOTO43592 962 aaKnown RBP12.53□□□□□ -0.4
SPIDR-212ENST00000519661 TBC1D4O60343 1298 aa12.53□□□□□ -0.4
SPIDR-212ENST00000519661 OR1G1P47890 313 aa12.53□□□□□ -0.4
SPIDR-212ENST00000519661 UBE2HP62256 183 aa12.53□□□□□ -0.4
SPIDR-212ENST00000519661 CLDN10P78369 228 aa12.53□□□□□ -0.4
SPIDR-212ENST00000519661 MRPL58Q14197 206 aaKnown RBP12.53□□□□□ -0.4
SPIDR-212ENST00000519661 USP41Q3LFD5 358 aa12.53□□□□□ -0.4
SPIDR-212ENST00000519661 PUS10Q3MIT2 529 aaKnown RBP12.53□□□□□ -0.4
SPIDR-212ENST00000519661 ZCWPW2Q504Y3 356 aa12.53□□□□□ -0.4
SPIDR-212ENST00000519661 GLRA4Q5JXX5 417 aa12.53□□□□□ -0.4
SPIDR-212ENST00000519661 PDXDC1Q6P996 788 aa12.53□□□□□ -0.4
SPIDR-212ENST00000519661 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.53□□□□□ -0.4
SPIDR-212ENST00000519661 HS2ST1Q7LGA3 356 aa12.53□□□□□ -0.4
SPIDR-212ENST00000519661 C3orf58Q8NDZ4 430 aa12.53□□□□□ -0.4
SPIDR-212ENST00000519661 VN1R2Q8NFZ6 395 aa12.53□□□□□ -0.4
SPIDR-212ENST00000519661 SLC22A17Q8WUG5 538 aa12.53□□□□□ -0.4
SPIDR-212ENST00000519661 HDAC7Q8WUI4 952 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms