RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 IRF2BPLQ9H1B7 796 aa13.65□□□□□ -0.22
CSMD1-205ENST00000519623 GOLGA2P5Q9HBQ8 144 aa13.65□□□□□ -0.22
CSMD1-205ENST00000519623 FAM86C1Q9NVL1 165 aa13.65□□□□□ -0.22
CSMD1-205ENST00000519623 MTRRQ9UBK8 725 aa13.65□□□□□ -0.22
CSMD1-205ENST00000519623 MYH11P35749 1972 aa13.65□□□□□ -0.22
CSMD1-205ENST00000519623 VWA3AA6NCI4 1184 aa13.64□□□□□ -0.23
CSMD1-205ENST00000519623 ANHXE9PGG2 379 aa13.64□□□□□ -0.23
CSMD1-205ENST00000519623 MCF2P10911 925 aa13.64□□□□□ -0.23
CSMD1-205ENST00000519623 KCNE1P15382 129 aa13.64□□□□□ -0.23
CSMD1-205ENST00000519623 BRCC3P46736 316 aa13.64□□□□□ -0.23
CSMD1-205ENST00000519623 YARSP54577 528 aaKnown RBP13.64□□□□□ -0.23
CSMD1-205ENST00000519623 SLC12A3P55017 1021 aa13.64□□□□□ -0.23
CSMD1-205ENST00000519623 RAD51AP2Q09MP3 1159 aa13.64□□□□□ -0.23
CSMD1-205ENST00000519623 ZRSR1Q15695 479 aaKnown RBP13.64□□□□□ -0.23
CSMD1-205ENST00000519623 UVSSAQ2YD98 709 aa13.64□□□□□ -0.23
CSMD1-205ENST00000519623 ZNF568Q3ZCX4 644 aa13.64□□□□□ -0.23
CSMD1-205ENST00000519623 ARL6IP4Q66PJ3 421 aaKnown RBP13.64□□□□□ -0.23
CSMD1-205ENST00000519623 CWF19L1Q69YN2 538 aaKnown RBP13.64□□□□□ -0.23
CSMD1-205ENST00000519623 GRASPQ7Z6J2 395 aaPredicted RBP13.64□□□□□ -0.23
CSMD1-205ENST00000519623 TMEM161BQ8NDZ6 487 aa13.64□□□□□ -0.23
CSMD1-205ENST00000519623 DDX27Q96GQ7 796 aaKnown RBP13.64□□□□□ -0.23
CSMD1-205ENST00000519623 ACAP3Q96P50 834 aa13.64□□□□□ -0.23
CSMD1-205ENST00000519623 PLIN2Q99541 437 aa13.64□□□□□ -0.23
CSMD1-205ENST00000519623 CCDC94Q9BW85 323 aaPredicted RBP13.64□□□□□ -0.23
CSMD1-205ENST00000519623 MFSD1Q9H3U5 465 aa13.64□□□□□ -0.23
CSMD1-205ENST00000519623 TOPORSQ9NS56 1045 aaPredicted RBP13.64□□□□□ -0.23
CSMD1-205ENST00000519623 WNT16Q9UBV4 365 aa13.64□□□□□ -0.23
CSMD1-205ENST00000519623 BACE2Q9Y5Z0 518 aa13.64□□□□□ -0.23
CSMD1-205ENST00000519623 CITO14578 2027 aa13.64□□□□□ -0.23
CSMD1-205ENST00000519623 NOTCH4Q99466 2003 aa13.64□□□□□ -0.23
CSMD1-205ENST00000519623 USP34Q70CQ2 3546 aa13.63□□□□□ -0.23
CSMD1-205ENST00000519623 KRBA1A5PL33 1030 aa13.63□□□□□ -0.23
CSMD1-205ENST00000519623 H3BQV1 296 aa13.63□□□□□ -0.23
CSMD1-205ENST00000519623 I3L4J1 428 aa13.63□□□□□ -0.23
CSMD1-205ENST00000519623 TRAPPC3O43617 180 aa13.63□□□□□ -0.23
CSMD1-205ENST00000519623 C8AP07357 584 aa13.63□□□□□ -0.23
CSMD1-205ENST00000519623 PLA2G4BP0C869 781 aa13.63□□□□□ -0.23
CSMD1-205ENST00000519623 PLS3P13797 630 aa13.63□□□□□ -0.23
CSMD1-205ENST00000519623 AOC1P19801 751 aa13.63□□□□□ -0.23
CSMD1-205ENST00000519623 FSHRP23945 695 aa13.63□□□□□ -0.23
CSMD1-205ENST00000519623 TKTP29401 623 aaKnown RBP13.63□□□□□ -0.23
CSMD1-205ENST00000519623 HOXA9P31269 272 aa13.63□□□□□ -0.23
CSMD1-205ENST00000519623 NTHL1P78549 312 aa13.63□□□□□ -0.23
CSMD1-205ENST00000519623 HTR4Q13639 388 aa13.63□□□□□ -0.23
CSMD1-205ENST00000519623 TMEM119Q4V9L6 283 aa13.63□□□□□ -0.23
CSMD1-205ENST00000519623 ARSHQ5FYA8 562 aa13.63□□□□□ -0.23
CSMD1-205ENST00000519623 PPM1LQ5SGD2 360 aa13.63□□□□□ -0.23
CSMD1-205ENST00000519623 AXDND1Q5T1B0 1012 aaPredicted RBP13.63□□□□□ -0.23
CSMD1-205ENST00000519623 MPZL3Q6UWV2 235 aa13.63□□□□□ -0.23
CSMD1-205ENST00000519623 SIX5Q8N196 739 aa13.63□□□□□ -0.23
CSMD1-205ENST00000519623 FLCNQ8NFG4 579 aa13.63□□□□□ -0.23
CSMD1-205ENST00000519623 SNX27Q96L92 541 aa13.63□□□□□ -0.23
CSMD1-205ENST00000519623 TCHPQ9BT92 498 aa13.63□□□□□ -0.23
CSMD1-205ENST00000519623 RPP25Q9BUL9 199 aaKnown RBP13.63□□□□□ -0.23
CSMD1-205ENST00000519623 SLC38A7Q9NVC3 462 aa13.63□□□□□ -0.23
CSMD1-205ENST00000519623 KCNG1Q9UIX4 513 aa13.63□□□□□ -0.23
CSMD1-205ENST00000519623 FBXL21Q9UKT6 434 aa13.63□□□□□ -0.23
CSMD1-205ENST00000519623 PTPRZ1P23471 2315 aaPredicted RBP13.62□□□□□ -0.23
CSMD1-205ENST00000519623 NPHP3-ACAD11A0A0J9YXS1 232 aa13.62□□□□□ -0.23
CSMD1-205ENST00000519623 CCL16O15467 120 aa13.62□□□□□ -0.23
CSMD1-205ENST00000519623 TBC1D4O60343 1298 aa13.62□□□□□ -0.23
CSMD1-205ENST00000519623 CFHP08603 1231 aa13.62□□□□□ -0.23
CSMD1-205ENST00000519623 POU2F2P09086 479 aa13.62□□□□□ -0.23
CSMD1-205ENST00000519623 MAPTP10636 758 aaKnown RBP13.62□□□□□ -0.23
CSMD1-205ENST00000519623 SRFP11831 508 aa13.62□□□□□ -0.23
CSMD1-205ENST00000519623 SLC10A6Q3KNW5 377 aa13.62□□□□□ -0.23
CSMD1-205ENST00000519623 LIN9Q5TKA1 542 aa13.62□□□□□ -0.23
CSMD1-205ENST00000519623 ANKS3Q6ZW76 656 aa13.62□□□□□ -0.23
CSMD1-205ENST00000519623 RTL10Q7L3V2 364 aa13.62□□□□□ -0.23
CSMD1-205ENST00000519623 GET4Q7L5D6 327 aaPredicted RBP13.62□□□□□ -0.23
CSMD1-205ENST00000519623 ST13P5Q8NFI4 369 aaPredicted RBP13.62□□□□□ -0.23
CSMD1-205ENST00000519623 SLC7A14Q8TBB6 771 aa13.62□□□□□ -0.23
CSMD1-205ENST00000519623 LRRC15Q8TF66 581 aa13.62□□□□□ -0.23
CSMD1-205ENST00000519623 C18orf25Q96B23 403 aaPredicted RBP13.62□□□□□ -0.23
CSMD1-205ENST00000519623 KCND2Q9NZV8 630 aa13.62□□□□□ -0.23
CSMD1-205ENST00000519623 CNTN3Q9P232 1028 aa13.62□□□□□ -0.23
CSMD1-205ENST00000519623 CDY1Q9Y6F8 540 aa13.62□□□□□ -0.23
CSMD1-205ENST00000519623 ZFP37Q9Y6Q3 630 aaPredicted RBP13.62□□□□□ -0.23
CSMD1-205ENST00000519623 RIF1Q5UIP0 2472 aaKnown RBP13.62□□□□□ -0.23
CSMD1-205ENST00000519623 PROB1E7EW31 1015 aa13.61□□□□□ -0.23
CSMD1-205ENST00000519623 PODXLO00592 558 aa13.61□□□□□ -0.23
CSMD1-205ENST00000519623 TOM1L1O75674 476 aa13.61□□□□□ -0.23
CSMD1-205ENST00000519623 ABLIM3O94929 683 aa13.61□□□□□ -0.23
CSMD1-205ENST00000519623 RPL9P32969 192 aaKnown RBP13.61□□□□□ -0.23
CSMD1-205ENST00000519623 MCM2P49736 904 aa13.61□□□□□ -0.23
CSMD1-205ENST00000519623 SMTNP53814 917 aa13.61□□□□□ -0.23
CSMD1-205ENST00000519623 MRPL58Q14197 206 aaKnown RBP13.61□□□□□ -0.23
CSMD1-205ENST00000519623 SEZ6Q53EL9 994 aa13.61□□□□□ -0.23
CSMD1-205ENST00000519623 LARP1BQ659C4 914 aaKnown RBP13.61□□□□□ -0.23
CSMD1-205ENST00000519623 SLC8B1Q6J4K2 584 aa13.61□□□□□ -0.23
CSMD1-205ENST00000519623 PARM1Q6UWI2 310 aa13.61□□□□□ -0.23
CSMD1-205ENST00000519623 ZPBP2Q6X784 338 aa13.61□□□□□ -0.23
CSMD1-205ENST00000519623 ITFG1Q8TB96 612 aa13.61□□□□□ -0.23
CSMD1-205ENST00000519623 KCNN1Q92952 543 aa13.61□□□□□ -0.23
CSMD1-205ENST00000519623 RTP3Q9BQQ7 232 aa13.61□□□□□ -0.23
CSMD1-205ENST00000519623 HAPLN2Q9GZV7 340 aa13.61□□□□□ -0.23
CSMD1-205ENST00000519623 DNMT3BQ9UBC3 853 aaKnown RBP13.61□□□□□ -0.23
CSMD1-205ENST00000519623 CDH7Q9ULB5 785 aa13.61□□□□□ -0.23
CSMD1-205ENST00000519623 SMC3Q9UQE7 1217 aa13.61□□□□□ -0.23
CSMD1-205ENST00000519623 NUMBLQ9Y6R0 609 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms