RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 ZNF511Q8NB15 262 aa7.76□□□□□ -1.17
CTNNA1-216ENST00000519489 CLEC18CQ8NCF0 446 aa7.76□□□□□ -1.17
CTNNA1-216ENST00000519489 TTC9Q92623 222 aa7.76□□□□□ -1.17
CTNNA1-216ENST00000519489 ASB16Q96NS5 453 aa7.76□□□□□ -1.17
CTNNA1-216ENST00000519489 LRRC3BQ96PB8 259 aa7.76□□□□□ -1.17
CTNNA1-216ENST00000519489 SEC62Q99442 399 aaKnown RBP7.76□□□□□ -1.17
CTNNA1-216ENST00000519489 GPR62Q9BZJ7 368 aa7.76□□□□□ -1.17
CTNNA1-216ENST00000519489 VAT1LQ9HCJ6 419 aa7.76□□□□□ -1.17
CTNNA1-216ENST00000519489 GDE1Q9NZC3 331 aa7.76□□□□□ -1.17
CTNNA1-216ENST00000519489 KCNH3Q9ULD8 1083 aa7.76□□□□□ -1.17
CTNNA1-216ENST00000519489 FAN1Q9Y2M0 1017 aa7.76□□□□□ -1.17
CTNNA1-216ENST00000519489 MRPS23Q9Y3D9 190 aaKnown RBP7.76□□□□□ -1.17
CTNNA1-216ENST00000519489 ATXN2Q99700 1313 aaKnown RBP7.76□□□□□ -1.17
CTNNA1-216ENST00000519489 PTPRBP23467 1997 aa7.75□□□□□ -1.17
CTNNA1-216ENST00000519489 CENPEQ02224 2701 aa7.75□□□□□ -1.17
CTNNA1-216ENST00000519489 PATL2C9JE40 543 aaKnown RBP7.75□□□□□ -1.17
CTNNA1-216ENST00000519489 MOSPD3O75425 235 aa7.75□□□□□ -1.17
CTNNA1-216ENST00000519489 WFS1O76024 890 aa7.75□□□□□ -1.17
CTNNA1-216ENST00000519489 C22orf31O95567 290 aa7.75□□□□□ -1.17
CTNNA1-216ENST00000519489 HNRNPA1P09651 372 aaKnown RBP eCLIP7.75□□□□□ -1.17
CTNNA1-216ENST00000519489 MYF5P13349 255 aa7.75□□□□□ -1.17
CTNNA1-216ENST00000519489 GBP1P32455 592 aa7.75□□□□□ -1.17
CTNNA1-216ENST00000519489 CTHP32929 405 aa7.75□□□□□ -1.17
CTNNA1-216ENST00000519489 IL12RB1P42701 662 aa7.75□□□□□ -1.17
CTNNA1-216ENST00000519489 PTGER3P43115 390 aa7.75□□□□□ -1.17
CTNNA1-216ENST00000519489 CXADRP78310 365 aa7.75□□□□□ -1.17
CTNNA1-216ENST00000519489 TLE3Q04726 772 aa7.75□□□□□ -1.17
CTNNA1-216ENST00000519489 LMAN2Q12907 356 aa7.75□□□□□ -1.17
CTNNA1-216ENST00000519489 GRM4Q14833 912 aa7.75□□□□□ -1.17
CTNNA1-216ENST00000519489 GNPTABQ3T906 1256 aa7.75□□□□□ -1.17
CTNNA1-216ENST00000519489 PRSS36Q5K4E3 855 aa7.75□□□□□ -1.17
CTNNA1-216ENST00000519489 ELMSAN1Q6PJG2 1045 aa7.75□□□□□ -1.17
CTNNA1-216ENST00000519489 LYPD8Q6UX82 237 aa7.75□□□□□ -1.17
CTNNA1-216ENST00000519489 AGMOQ6ZNB7 445 aa7.75□□□□□ -1.17
CTNNA1-216ENST00000519489 FRMD1Q8N878 549 aa7.75□□□□□ -1.17
CTNNA1-216ENST00000519489 WBP1Q96G27 269 aa7.75□□□□□ -1.17
CTNNA1-216ENST00000519489 CLSTN3Q9BQT9 956 aa7.75□□□□□ -1.17
CTNNA1-216ENST00000519489 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.75□□□□□ -1.17
CTNNA1-216ENST00000519489 SNTG2Q9NY99 539 aa7.75□□□□□ -1.17
CTNNA1-216ENST00000519489 FNIP2Q9P278 1114 aa7.75□□□□□ -1.17
CTNNA1-216ENST00000519489 WASF2Q9Y6W5 498 aa7.75□□□□□ -1.17
CTNNA1-216ENST00000519489 GOLGA4Q13439 2230 aaKnown RBP7.75□□□□□ -1.17
CTNNA1-216ENST00000519489 GON4LQ3T8J9 2241 aa7.75□□□□□ -1.17
CTNNA1-216ENST00000519489 KAT6AQ92794 2004 aa7.74□□□□□ -1.17
CTNNA1-216ENST00000519489 A0A1B0GTL3 188 aa7.74□□□□□ -1.17
CTNNA1-216ENST00000519489 ANTXRLA6NF34 631 aa7.74□□□□□ -1.17
CTNNA1-216ENST00000519489 APPP05067 770 aa7.74□□□□□ -1.17
CTNNA1-216ENST00000519489 ALDH2P05091 517 aa7.74□□□□□ -1.17
CTNNA1-216ENST00000519489 RHOP08100 348 aa7.74□□□□□ -1.17
CTNNA1-216ENST00000519489 FGRP09769 529 aa7.74□□□□□ -1.17
CTNNA1-216ENST00000519489 ZSCAN20P17040 1043 aaPredicted RBP7.74□□□□□ -1.17
CTNNA1-216ENST00000519489 PSMC3P17980 439 aa7.74□□□□□ -1.17
CTNNA1-216ENST00000519489 ITGB5P18084 799 aa7.74□□□□□ -1.17
CTNNA1-216ENST00000519489 ATP4AP20648 1035 aa7.74□□□□□ -1.17
CTNNA1-216ENST00000519489 VARSP26640 1264 aaKnown RBP7.74□□□□□ -1.17
CTNNA1-216ENST00000519489 DHPSP49366 369 aaPredicted RBP7.74□□□□□ -1.17
CTNNA1-216ENST00000519489 MLLT6P55198 1093 aaPredicted RBP7.74□□□□□ -1.17
CTNNA1-216ENST00000519489 NFKB2Q00653 900 aa7.74□□□□□ -1.17
CTNNA1-216ENST00000519489 RNASELQ05823 741 aaKnown RBP7.74□□□□□ -1.17
CTNNA1-216ENST00000519489 SERINC3Q13530 473 aa7.74□□□□□ -1.17
CTNNA1-216ENST00000519489 TUSC1Q2TAM9 212 aa7.74□□□□□ -1.17
CTNNA1-216ENST00000519489 PPM1LQ5SGD2 360 aa7.74□□□□□ -1.17
CTNNA1-216ENST00000519489 ODR4Q5SWX8 454 aa7.74□□□□□ -1.17
CTNNA1-216ENST00000519489 NAIF1Q69YI7 327 aaPredicted RBP7.74□□□□□ -1.17
CTNNA1-216ENST00000519489 FSTL4Q6MZW2 842 aa7.74□□□□□ -1.17
CTNNA1-216ENST00000519489 SLC23A3Q6PIS1 610 aa7.74□□□□□ -1.17
CTNNA1-216ENST00000519489 ARMCX6Q7L4S7 300 aa7.74□□□□□ -1.17
CTNNA1-216ENST00000519489 LINC01465Q8N7H1 131 aa7.74□□□□□ -1.17
CTNNA1-216ENST00000519489 SLC7A14Q8TBB6 771 aa7.74□□□□□ -1.17
CTNNA1-216ENST00000519489 RHPN1Q8TCX5 695 aa7.74□□□□□ -1.17
CTNNA1-216ENST00000519489 WHAMMQ8TF30 809 aa7.74□□□□□ -1.17
CTNNA1-216ENST00000519489 BAP1Q92560 729 aa7.74□□□□□ -1.17
CTNNA1-216ENST00000519489 GTPBP2Q9BX10 602 aaKnown RBP7.74□□□□□ -1.17
CTNNA1-216ENST00000519489 ZNF768Q9H5H4 540 aaKnown RBP7.74□□□□□ -1.17
CTNNA1-216ENST00000519489 ZFP14Q9HCL3 533 aa7.74□□□□□ -1.17
CTNNA1-216ENST00000519489 FBRSL1Q9HCM7 1045 aaKnown RBP7.74□□□□□ -1.17
CTNNA1-216ENST00000519489 GTSE1Q9NYZ3 720 aa7.74□□□□□ -1.17
CTNNA1-216ENST00000519489 SLC8A2Q9UPR5 921 aa7.74□□□□□ -1.17
CTNNA1-216ENST00000519489 MAN2B2Q9Y2E5 1009 aa7.74□□□□□ -1.17
CTNNA1-216ENST00000519489 MTORP42345 2549 aa7.74□□□□□ -1.17
CTNNA1-216ENST00000519489 NUP205Q92621 2012 aa7.73□□□□□ -1.17
CTNNA1-216ENST00000519489 WDR27A2RRH5 827 aa7.73□□□□□ -1.17
CTNNA1-216ENST00000519489 CFAP99D6REC4 459 aa7.73□□□□□ -1.17
CTNNA1-216ENST00000519489 ZNF263O14978 683 aa7.73□□□□□ -1.17
CTNNA1-216ENST00000519489 ORC4O43929 436 aa7.73□□□□□ -1.17
CTNNA1-216ENST00000519489 F12P00748 615 aaPredicted RBP7.73□□□□□ -1.17
CTNNA1-216ENST00000519489 POMCP01189 267 aa7.73□□□□□ -1.17
CTNNA1-216ENST00000519489 POU2F2P09086 479 aa7.73□□□□□ -1.17
CTNNA1-216ENST00000519489 ATXN1LP0C7T5 689 aaKnown RBP7.73□□□□□ -1.17
CTNNA1-216ENST00000519489 SNRPBP14678 240 aaKnown RBP7.73□□□□□ -1.17
CTNNA1-216ENST00000519489 ATP5JP18859 108 aa7.73□□□□□ -1.17
CTNNA1-216ENST00000519489 EIF4BP23588 611 aaKnown RBP7.73□□□□□ -1.17
CTNNA1-216ENST00000519489 HOXA9P31269 272 aa7.73□□□□□ -1.17
CTNNA1-216ENST00000519489 CLCN3P51790 818 aa7.73□□□□□ -1.17
CTNNA1-216ENST00000519489 CLDN6P56747 220 aa7.73□□□□□ -1.17
CTNNA1-216ENST00000519489 NLRP11P59045 1033 aaKnown RBP7.73□□□□□ -1.17
CTNNA1-216ENST00000519489 LINC01559Q495D7 138 aa7.73□□□□□ -1.17
CTNNA1-216ENST00000519489 RTP2Q5QGT7 225 aa7.73□□□□□ -1.17
CTNNA1-216ENST00000519489 GLB1LQ6UWU2 654 aa7.73□□□□□ -1.17
CTNNA1-216ENST00000519489 ZNF574Q6ZN55 896 aaPredicted RBP7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms