RNA–Protein interactions for RNA: ENST00000519100.5

PABPC1-209, Transcript of poly(A) binding protein cytoplasmic 1, human

TSL 3

Gene PABPC1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC1-209	ENST00000519100	KLHL33	A6NCF5	533 aa		4.17	□□□□□ -1.74
PABPC1-209	ENST00000519100	CCDC154	A6NI56	674 aa		4.17	□□□□□ -1.74
PABPC1-209	ENST00000519100	FAM171A2	A8MVW0	826 aa		4.17	□□□□□ -1.74
PABPC1-209	ENST00000519100	PEX11B	O96011	259 aa		4.17	□□□□□ -1.74
PABPC1-209	ENST00000519100	KIF23	Q02241	960 aa	Predicted RBP	4.17	□□□□□ -1.74
PABPC1-209	ENST00000519100	DSC2	Q02487	901 aa		4.17	□□□□□ -1.74
PABPC1-209	ENST00000519100	BEAN1	Q3B7T3	259 aa		4.17	□□□□□ -1.74
PABPC1-209	ENST00000519100	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	4.17	□□□□□ -1.74
PABPC1-209	ENST00000519100	AGAP9	Q5VTM2	703 aa		4.17	□□□□□ -1.74
PABPC1-209	ENST00000519100	ZNF529	Q6P280	563 aa		4.17	□□□□□ -1.74
PABPC1-209	ENST00000519100	PDZD4	Q76G19	769 aa	Predicted RBP	4.17	□□□□□ -1.74
PABPC1-209	ENST00000519100	UBE3B	Q7Z3V4	1068 aa		4.17	□□□□□ -1.74
PABPC1-209	ENST00000519100	PLXDC1	Q8IUK5	500 aa		4.17	□□□□□ -1.74
PABPC1-209	ENST00000519100	CMTR2	Q8IYT2	770 aa	Known RBP	4.17	□□□□□ -1.74
PABPC1-209	ENST00000519100	MRGPRX4	Q96LA9	322 aa		4.17	□□□□□ -1.74
PABPC1-209	ENST00000519100	ZSWIM1	Q9BR11	485 aa		4.17	□□□□□ -1.74
PABPC1-209	ENST00000519100	SLC46A2	Q9BY10	475 aa		4.17	□□□□□ -1.74
PABPC1-209	ENST00000519100	SENP6	Q9GZR1	1112 aa	Predicted RBP	4.17	□□□□□ -1.74
PABPC1-209	ENST00000519100	HOMER2	Q9NSB8	354 aa		4.17	□□□□□ -1.74
PABPC1-209	ENST00000519100	VSX1	Q9NZR4	365 aa	Predicted RBP	4.17	□□□□□ -1.74
PABPC1-209	ENST00000519100	EIF2B4	Q9UI10	523 aa	Known RBP	4.17	□□□□□ -1.74
PABPC1-209	ENST00000519100	HDAC5	Q9UQL6	1122 aa		4.17	□□□□□ -1.74
PABPC1-209	ENST00000519100	NOP58	Q9Y2X3	529 aa	Known RBP	4.17	□□□□□ -1.74
PABPC1-209	ENST00000519100	PCDHB1	Q9Y5F3	818 aa		4.17	□□□□□ -1.74
PABPC1-209	ENST00000519100	MYBBP1A	Q9BQG0	1328 aa	Known RBP	4.17	□□□□□ -1.74
PABPC1-209	ENST00000519100	ZFPL1	O95159	310 aa		4.16	□□□□□ -1.74
PABPC1-209	ENST00000519100	ITGB1	P05556	798 aa		4.16	□□□□□ -1.74
PABPC1-209	ENST00000519100	SNRPA1	P09661	255 aa	Known RBP	4.16	□□□□□ -1.74
PABPC1-209	ENST00000519100	IL2RB	P14784	551 aa		4.16	□□□□□ -1.74
PABPC1-209	ENST00000519100	ATP5J	P18859	108 aa		4.16	□□□□□ -1.74
PABPC1-209	ENST00000519100	DDC	P20711	480 aa		4.16	□□□□□ -1.74
PABPC1-209	ENST00000519100	PER3	P56645	1201 aa		4.16	□□□□□ -1.74
PABPC1-209	ENST00000519100	ZNF280A	P59817	542 aa	Predicted RBP	4.16	□□□□□ -1.74
PABPC1-209	ENST00000519100	SLFN5	Q08AF3	891 aa		4.16	□□□□□ -1.74
PABPC1-209	ENST00000519100	ABHD18	Q0P651	414 aa		4.16	□□□□□ -1.74
PABPC1-209	ENST00000519100	SCAP	Q12770	1279 aa		4.16	□□□□□ -1.74
PABPC1-209	ENST00000519100	FLYWCH1	Q4VC44	716 aa		4.16	□□□□□ -1.74
PABPC1-209	ENST00000519100	EFCAB12	Q6NXP0	572 aa		4.16	□□□□□ -1.74
PABPC1-209	ENST00000519100	RHOT1	Q8IXI2	618 aa		4.16	□□□□□ -1.74
PABPC1-209	ENST00000519100	NEU4	Q8WWR8	484 aa	Predicted RBP	4.16	□□□□□ -1.74
PABPC1-209	ENST00000519100	KLHL11	Q9NVR0	708 aa		4.16	□□□□□ -1.74
PABPC1-209	ENST00000519100	FZD1	Q9UP38	647 aa		4.16	□□□□□ -1.74
PABPC1-209	ENST00000519100	MAP3K2	Q9Y2U5	619 aa		4.16	□□□□□ -1.74
PABPC1-209	ENST00000519100	REXO2	Q9Y3B8	237 aa	Known RBP	4.16	□□□□□ -1.74
PABPC1-209	ENST00000519100	USP15	Q9Y4E8	981 aa	Predicted RBP	4.16	□□□□□ -1.74
PABPC1-209	ENST00000519100	TCRBV7S2A1N4T	A0A589	114 aa		4.15	□□□□□ -1.75
PABPC1-209	ENST00000519100	GRID2IP	A4D2P6	1211 aa		4.15	□□□□□ -1.75
PABPC1-209	ENST00000519100	TMEM200C	A6NKL6	621 aa		4.15	□□□□□ -1.75
PABPC1-209	ENST00000519100	CDC42EP1	Q00587	391 aa		4.15	□□□□□ -1.75
PABPC1-209	ENST00000519100	COL10A1	Q03692	680 aa		4.15	□□□□□ -1.75
PABPC1-209	ENST00000519100	OCA2	Q04671	838 aa		4.15	□□□□□ -1.75
PABPC1-209	ENST00000519100	KRTAP1-1	Q07627	177 aa		4.15	□□□□□ -1.75
PABPC1-209	ENST00000519100	B3GNTL1	Q67FW5	361 aa	Predicted RBP	4.15	□□□□□ -1.75
PABPC1-209	ENST00000519100	MED25	Q71SY5	747 aa		4.15	□□□□□ -1.75
PABPC1-209	ENST00000519100	RHOT2	Q8IXI1	618 aa		4.15	□□□□□ -1.75
PABPC1-209	ENST00000519100	AMER2	Q8N7J2	671 aa		4.15	□□□□□ -1.75
PABPC1-209	ENST00000519100	ZFP28	Q8NHY6	868 aa		4.15	□□□□□ -1.75
PABPC1-209	ENST00000519100	NSUN6	Q8TEA1	469 aa	Known RBP	4.15	□□□□□ -1.75
PABPC1-209	ENST00000519100	MYEOV	Q96EZ4	313 aa		4.15	□□□□□ -1.75
PABPC1-209	ENST00000519100	TMX3	Q96JJ7	454 aa		4.15	□□□□□ -1.75
PABPC1-209	ENST00000519100	C7orf25	Q9BPX7	421 aa		4.15	□□□□□ -1.75
PABPC1-209	ENST00000519100	AKIP1	Q9NQ31	210 aa		4.15	□□□□□ -1.75
PABPC1-209	ENST00000519100	FAM30A	Q9NZY2	134 aa		4.15	□□□□□ -1.75
PABPC1-209	ENST00000519100	POGK	Q9P215	609 aa		4.15	□□□□□ -1.75
PABPC1-209	ENST00000519100	C11orf21	Q9P2W6	132 aa		4.15	□□□□□ -1.75
PABPC1-209	ENST00000519100	ZBTB21	Q9ULJ3	1066 aa		4.15	□□□□□ -1.75
PABPC1-209	ENST00000519100	AATK	Q6ZMQ8	1374 aa		4.14	□□□□□ -1.75
PABPC1-209	ENST00000519100	LRRC14B	A6NHZ5	514 aa		4.14	□□□□□ -1.75
PABPC1-209	ENST00000519100	GCSH	P23434	173 aa		4.14	□□□□□ -1.75
PABPC1-209	ENST00000519100	MCM7	P33993	719 aa		4.14	□□□□□ -1.75
PABPC1-209	ENST00000519100	NEK2	P51955	445 aa		4.14	□□□□□ -1.75
PABPC1-209	ENST00000519100	ADK	P55263	362 aa	Known RBP	4.14	□□□□□ -1.75
PABPC1-209	ENST00000519100	CTXN1	P60606	82 aa		4.14	□□□□□ -1.75
PABPC1-209	ENST00000519100	NOMO3	P69849	1222 aa		4.14	□□□□□ -1.75
PABPC1-209	ENST00000519100	TLE1	Q04724	770 aa		4.14	□□□□□ -1.75
PABPC1-209	ENST00000519100	UBXN2B	Q14CS0	331 aa		4.14	□□□□□ -1.75
PABPC1-209	ENST00000519100	NOMO2	Q5JPE7	1267 aa		4.14	□□□□□ -1.75
PABPC1-209	ENST00000519100	RRP12	Q5JTH9	1297 aa	Known RBP	4.14	□□□□□ -1.75
PABPC1-209	ENST00000519100	TMEM240	Q5SV17	173 aa		4.14	□□□□□ -1.75
PABPC1-209	ENST00000519100	GJC2	Q5T442	439 aa	Predicted RBP	4.14	□□□□□ -1.75
PABPC1-209	ENST00000519100	PNMA8A	Q86V59	439 aa	Predicted RBP	4.14	□□□□□ -1.75
PABPC1-209	ENST00000519100	VRK3	Q8IV63	474 aa		4.14	□□□□□ -1.75
PABPC1-209	ENST00000519100	RAVER1	Q8IY67	606 aa	Known RBP	4.14	□□□□□ -1.75
PABPC1-209	ENST00000519100	DRC7	Q8IY82	874 aa		4.14	□□□□□ -1.75
PABPC1-209	ENST00000519100	CPEB3	Q8NE35	698 aa	Known RBP	4.14	□□□□□ -1.75
PABPC1-209	ENST00000519100	OR56A1	Q8NGH5	318 aa		4.14	□□□□□ -1.75
PABPC1-209	ENST00000519100	ZCRB1	Q8TBF4	217 aa	Known RBP	4.14	□□□□□ -1.75
PABPC1-209	ENST00000519100	PHACTR3	Q96KR7	559 aa		4.14	□□□□□ -1.75
PABPC1-209	ENST00000519100	DCLRE1C	Q96SD1	692 aa	Known RBP	4.14	□□□□□ -1.75
PABPC1-209	ENST00000519100	IKZF4	Q9H2S9	585 aa		4.14	□□□□□ -1.75
PABPC1-209	ENST00000519100	MANSC1	Q9H8J5	431 aa		4.14	□□□□□ -1.75
PABPC1-209	ENST00000519100	TMEM140	Q9NV12	185 aa		4.14	□□□□□ -1.75
PABPC1-209	ENST00000519100	MOCS1	Q9NZB8	636 aa		4.14	□□□□□ -1.75
PABPC1-209	ENST00000519100	ANKFY1	Q9P2R3	1169 aa		4.14	□□□□□ -1.75
PABPC1-209	ENST00000519100	HSFX1	Q9UBD0	423 aa		4.14	□□□□□ -1.75
PABPC1-209	ENST00000519100	USP25	Q9UHP3	1055 aa		4.14	□□□□□ -1.75
PABPC1-209	ENST00000519100	CLCA2	Q9UQC9	943 aa		4.14	□□□□□ -1.75
PABPC1-209	ENST00000519100	CDHR4	A6H8M9	788 aa		4.13	□□□□□ -1.75
PABPC1-209	ENST00000519100	UNC119B	A6NIH7	251 aa		4.13	□□□□□ -1.75
PABPC1-209	ENST00000519100	SGTA	O43765	313 aa		4.13	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms