RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 TECP42680 631 aa14.39□□□□□ -0.11
PABPC1-208ENST00000519004 MARCKSL1P49006 195 aa14.39□□□□□ -0.11
PABPC1-208ENST00000519004 ERFP50548 548 aa14.39□□□□□ -0.11
PABPC1-208ENST00000519004 AP2B1P63010 937 aa14.39□□□□□ -0.11
PABPC1-208ENST00000519004 ASPHQ12797 758 aa14.39□□□□□ -0.11
PABPC1-208ENST00000519004 UGT2A3Q6UWM9 527 aa14.39□□□□□ -0.11
PABPC1-208ENST00000519004 RIPOR1Q6ZS17 1223 aa14.39□□□□□ -0.11
PABPC1-208ENST00000519004 RASSF3Q86WH2 238 aa14.39□□□□□ -0.11
PABPC1-208ENST00000519004 KSR1Q8IVT5 923 aa14.39□□□□□ -0.11
PABPC1-208ENST00000519004 CCDC65Q8IXS2 484 aa14.39□□□□□ -0.11
PABPC1-208ENST00000519004 ALDH16A1Q8IZ83 802 aa14.39□□□□□ -0.11
PABPC1-208ENST00000519004 METTL25Q8N6Q8 603 aa14.39□□□□□ -0.11
PABPC1-208ENST00000519004 PNMA5Q96PV4 448 aa14.39□□□□□ -0.11
PABPC1-208ENST00000519004 PANX3Q96QZ0 392 aa14.39□□□□□ -0.11
PABPC1-208ENST00000519004 CYTH2Q99418 400 aa14.39□□□□□ -0.11
PABPC1-208ENST00000519004 ARHGEF4Q9NR80 690 aa14.39□□□□□ -0.11
PABPC1-208ENST00000519004 WHRNQ9P202 907 aa14.39□□□□□ -0.11
PABPC1-208ENST00000519004 TRAF3IP3Q9Y228 551 aa14.39□□□□□ -0.11
PABPC1-208ENST00000519004 IRS4O14654 1257 aaPredicted RBP14.39□□□□□ -0.11
PABPC1-208ENST00000519004 MAGEC1O60732 1142 aa14.39□□□□□ -0.11
PABPC1-208ENST00000519004 BAG2O95816 211 aa14.39□□□□□ -0.11
PABPC1-208ENST00000519004 RPL5P46777 297 aaKnown RBP14.39□□□□□ -0.11
PABPC1-208ENST00000519004 CHN2P52757 468 aa14.39□□□□□ -0.11
PABPC1-208ENST00000519004 HDAC4P56524 1084 aa14.39□□□□□ -0.11
PABPC1-208ENST00000519004 JAM2P57087 298 aa14.39□□□□□ -0.11
PABPC1-208ENST00000519004 NET1Q7Z628 596 aaPredicted RBP14.39□□□□□ -0.11
PABPC1-208ENST00000519004 TRABD2AQ86V40 505 aa14.39□□□□□ -0.11
PABPC1-208ENST00000519004 LRRC6Q86X45 466 aa14.39□□□□□ -0.11
PABPC1-208ENST00000519004 VGLL2Q8N8G2 317 aa14.39□□□□□ -0.11
PABPC1-208ENST00000519004 ERMNQ8TAM6 284 aa14.39□□□□□ -0.11
PABPC1-208ENST00000519004 CALML4Q96GE6 196 aa14.39□□□□□ -0.11
PABPC1-208ENST00000519004 HEY2Q9UBP5 337 aa14.39□□□□□ -0.11
PABPC1-208ENST00000519004 DCTN4Q9UJW0 460 aa14.39□□□□□ -0.11
PABPC1-208ENST00000519004 GLI3P10071 1580 aa14.38□□□□□ -0.11
PABPC1-208ENST00000519004 CPA3P15088 417 aa14.38□□□□□ -0.11
PABPC1-208ENST00000519004 PON1P27169 355 aa14.38□□□□□ -0.11
PABPC1-208ENST00000519004 DLG1Q12959 904 aa14.38□□□□□ -0.11
PABPC1-208ENST00000519004 SIX1Q15475 284 aaPredicted RBP14.38□□□□□ -0.11
PABPC1-208ENST00000519004 SLC1A5Q15758 541 aa14.38□□□□□ -0.11
PABPC1-208ENST00000519004 FYB2Q5VWT5 728 aa14.38□□□□□ -0.11
PABPC1-208ENST00000519004 LARP4BQ92615 738 aaKnown RBP14.38□□□□□ -0.11
PABPC1-208ENST00000519004 GFM2Q969S9 779 aaKnown RBP14.38□□□□□ -0.11
PABPC1-208ENST00000519004 SKA1Q96BD8 255 aa14.38□□□□□ -0.11
PABPC1-208ENST00000519004 HNRNPABQ99729 332 aaKnown RBP14.38□□□□□ -0.11
PABPC1-208ENST00000519004 FGFBP2Q9BYJ0 223 aa14.38□□□□□ -0.11
PABPC1-208ENST00000519004 NACA2Q9H009 215 aa14.38□□□□□ -0.11
PABPC1-208ENST00000519004 SH3GLB2Q9NR46 395 aa14.38□□□□□ -0.11
PABPC1-208ENST00000519004 COG5Q9UP83 839 aa14.38□□□□□ -0.11
PABPC1-208ENST00000519004 DNAJC6O75061 913 aa14.37□□□□□ -0.11
PABPC1-208ENST00000519004 GGPS1O95749 300 aa14.37□□□□□ -0.11
PABPC1-208ENST00000519004 UQCRFS1P1P0C7P4 283 aa14.37□□□□□ -0.11
PABPC1-208ENST00000519004 VCLP18206 1134 aa14.37□□□□□ -0.11
PABPC1-208ENST00000519004 NAT1P18440 290 aa14.37□□□□□ -0.11
PABPC1-208ENST00000519004 ABCB4P21439 1286 aa14.37□□□□□ -0.11
PABPC1-208ENST00000519004 HOXA7P31268 230 aaPredicted RBP14.37□□□□□ -0.11
PABPC1-208ENST00000519004 SLC18A1P54219 525 aa14.37□□□□□ -0.11
PABPC1-208ENST00000519004 PDE1BQ01064 536 aa14.37□□□□□ -0.11
PABPC1-208ENST00000519004 KRT72Q14CN4 511 aa14.37□□□□□ -0.11
PABPC1-208ENST00000519004 PDK3Q15120 406 aa14.37□□□□□ -0.11
PABPC1-208ENST00000519004 MAP7D1Q3KQU3 841 aa14.37□□□□□ -0.11
PABPC1-208ENST00000519004 NADK2Q4G0N4 442 aa14.37□□□□□ -0.11
PABPC1-208ENST00000519004 ARHGAP24Q8N264 748 aa14.37□□□□□ -0.11
PABPC1-208ENST00000519004 ZNF75CPQ92670 426 aaPredicted RBP14.37□□□□□ -0.11
PABPC1-208ENST00000519004 DDX12PQ92771 950 aa14.37□□□□□ -0.11
PABPC1-208ENST00000519004 SRPK1Q96SB4 655 aaKnown RBP14.37□□□□□ -0.11
PABPC1-208ENST00000519004 ZBTB3Q9H5J0 574 aa14.37□□□□□ -0.11
PABPC1-208ENST00000519004 UBAP1Q9NZ09 502 aa14.37□□□□□ -0.11
PABPC1-208ENST00000519004 STK17AQ9UEE5 414 aa14.37□□□□□ -0.11
PABPC1-208ENST00000519004 PLCH1Q4KWH8 1693 aa14.37□□□□□ -0.11
PABPC1-208ENST00000519004 P4HA2O15460 535 aa14.37□□□□□ -0.11
PABPC1-208ENST00000519004 ESRRAP11474 423 aaPredicted RBP14.37□□□□□ -0.11
PABPC1-208ENST00000519004 RPA3P35244 121 aaPredicted RBP14.37□□□□□ -0.11
PABPC1-208ENST00000519004 ACTR3P61158 418 aa14.37□□□□□ -0.11
PABPC1-208ENST00000519004 IFIT5Q13325 482 aaKnown RBP14.37□□□□□ -0.11
PABPC1-208ENST00000519004 BCL2A1Q16548 175 aa14.37□□□□□ -0.11
PABPC1-208ENST00000519004 CLPPQ16740 277 aaPredicted RBP14.37□□□□□ -0.11
PABPC1-208ENST00000519004 TRMT5Q32P41 509 aaKnown RBP14.37□□□□□ -0.11
PABPC1-208ENST00000519004 PDCD4Q53EL6 469 aaKnown RBP14.37□□□□□ -0.11
PABPC1-208ENST00000519004 TMCO4Q5TGY1 634 aa14.37□□□□□ -0.11
PABPC1-208ENST00000519004 PATL1Q86TB9 770 aaKnown RBP14.37□□□□□ -0.11
PABPC1-208ENST00000519004 TRIM50Q86XT4 487 aa14.37□□□□□ -0.11
PABPC1-208ENST00000519004 TTC5Q8N0Z6 440 aa14.37□□□□□ -0.11
PABPC1-208ENST00000519004 SYT2Q8N9I0 419 aaPredicted RBP14.37□□□□□ -0.11
PABPC1-208ENST00000519004 MIGA1Q8NAN2 632 aa14.37□□□□□ -0.11
PABPC1-208ENST00000519004 ZFP28Q8NHY6 868 aa14.37□□□□□ -0.11
PABPC1-208ENST00000519004 PWWP2AQ96N64 755 aa14.37□□□□□ -0.11
PABPC1-208ENST00000519004 ARPC5LQ9BPX5 153 aa14.37□□□□□ -0.11
PABPC1-208ENST00000519004 GPAMQ9HCL2 828 aa14.37□□□□□ -0.11
PABPC1-208ENST00000519004 ALS2Q96Q42 1657 aa14.37□□□□□ -0.11
PABPC1-208ENST00000519004 CCDC160A6NGH7 325 aa14.36□□□□□ -0.11
PABPC1-208ENST00000519004 SLC5A2P31639 672 aa14.36□□□□□ -0.11
PABPC1-208ENST00000519004 CCR3P51677 355 aa14.36□□□□□ -0.11
PABPC1-208ENST00000519004 AQP4P55087 323 aa14.36□□□□□ -0.11
PABPC1-208ENST00000519004 COASYQ13057 564 aa14.36□□□□□ -0.11
PABPC1-208ENST00000519004 LPIN1Q14693 890 aa14.36□□□□□ -0.11
PABPC1-208ENST00000519004 MAPK6Q16659 721 aa14.36□□□□□ -0.11
PABPC1-208ENST00000519004 NANOGNBQ7Z5D8 188 aa14.36□□□□□ -0.11
PABPC1-208ENST00000519004 ADGRG6Q86SQ4 1221 aa14.36□□□□□ -0.11
PABPC1-208ENST00000519004 ZC3H3Q8IXZ2 948 aaKnown RBP14.36□□□□□ -0.11
PABPC1-208ENST00000519004 SPATA5Q8NB90 893 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms