RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 CFAP45Q9UL16 551 aa14.54□□□□□ -0.08
VEGFA-219ENST00000518824 USP15Q9Y4E8 981 aaPredicted RBP14.54□□□□□ -0.08
VEGFA-219ENST00000518824 A0A1B0GVL5 298 aa14.53□□□□□ -0.08
VEGFA-219ENST00000518824 TTC26A0AVF1 554 aa14.53□□□□□ -0.08
VEGFA-219ENST00000518824 CARNS1A5YM72 827 aa14.53□□□□□ -0.08
VEGFA-219ENST00000518824 LACTBL1A8MY62 500 aa14.53□□□□□ -0.08
VEGFA-219ENST00000518824 TNFRSF10AO00220 468 aa14.53□□□□□ -0.08
VEGFA-219ENST00000518824 TEX28O15482 410 aa14.53□□□□□ -0.08
VEGFA-219ENST00000518824 NR1I2O75469 434 aa14.53□□□□□ -0.08
VEGFA-219ENST00000518824 PRPF6O94906 941 aaKnown RBP14.53□□□□□ -0.08
VEGFA-219ENST00000518824 GCNT3O95395 438 aa14.53□□□□□ -0.08
VEGFA-219ENST00000518824 URODP06132 367 aa14.53□□□□□ -0.08
VEGFA-219ENST00000518824 KCNE1P15382 129 aa14.53□□□□□ -0.08
VEGFA-219ENST00000518824 ADSSP30520 456 aa14.53□□□□□ -0.08
VEGFA-219ENST00000518824 GLUD2P49448 558 aa14.53□□□□□ -0.08
VEGFA-219ENST00000518824 CLCN4P51793 760 aa14.53□□□□□ -0.08
VEGFA-219ENST00000518824 YARSP54577 528 aaKnown RBP14.53□□□□□ -0.08
VEGFA-219ENST00000518824 WNT7BP56706 349 aa14.53□□□□□ -0.08
VEGFA-219ENST00000518824 UPP1Q16831 310 aa14.53□□□□□ -0.08
VEGFA-219ENST00000518824 HERC4Q5GLZ8 1057 aaPredicted RBP14.53□□□□□ -0.08
VEGFA-219ENST00000518824 FAM171A1Q5VUB5 890 aa14.53□□□□□ -0.08
VEGFA-219ENST00000518824 APBB1IPQ7Z5R6 666 aaPredicted RBP14.53□□□□□ -0.08
VEGFA-219ENST00000518824 RIN2Q8WYP3 895 aaPredicted RBP14.53□□□□□ -0.08
VEGFA-219ENST00000518824 TNMDQ9H2S6 317 aa14.53□□□□□ -0.08
VEGFA-219ENST00000518824 MRPL17Q9NRX2 175 aaKnown RBP14.53□□□□□ -0.08
VEGFA-219ENST00000518824 SERTAD1Q9UHV2 236 aa14.53□□□□□ -0.08
VEGFA-219ENST00000518824 OGTO15294 1046 aa14.52□□□□□ -0.09
VEGFA-219ENST00000518824 ADAM12O43184 909 aa14.52□□□□□ -0.09
VEGFA-219ENST00000518824 B3GAT3O94766 335 aa14.52□□□□□ -0.09
VEGFA-219ENST00000518824 SPATA31D3P0C874 917 aa14.52□□□□□ -0.09
VEGFA-219ENST00000518824 GAP43P17677 238 aa14.52□□□□□ -0.09
VEGFA-219ENST00000518824 KLRC2P26717 231 aa14.52□□□□□ -0.09
VEGFA-219ENST00000518824 HOXD13P35453 343 aa14.52□□□□□ -0.09
VEGFA-219ENST00000518824 AFMP43652 599 aa14.52□□□□□ -0.09
VEGFA-219ENST00000518824 ACOT2P49753 483 aa14.52□□□□□ -0.09
VEGFA-219ENST00000518824 ZP2Q05996 745 aa14.52□□□□□ -0.09
VEGFA-219ENST00000518824 CUL4BQ13620 913 aa14.52□□□□□ -0.09
VEGFA-219ENST00000518824 BECN1Q14457 450 aa14.52□□□□□ -0.09
VEGFA-219ENST00000518824 CRELD2Q6UXH1 353 aaPredicted RBP14.52□□□□□ -0.09
VEGFA-219ENST00000518824 SPATA31D4Q6ZUB0 917 aa14.52□□□□□ -0.09
VEGFA-219ENST00000518824 CEP57Q86XR8 500 aa14.52□□□□□ -0.09
VEGFA-219ENST00000518824 SUSD6Q92537 303 aa14.52□□□□□ -0.09
VEGFA-219ENST00000518824 SPATA32Q96LK8 384 aa14.52□□□□□ -0.09
VEGFA-219ENST00000518824 MSTO1Q9BUK6 570 aa14.52□□□□□ -0.09
VEGFA-219ENST00000518824 RXFP1Q9HBX9 757 aa14.52□□□□□ -0.09
VEGFA-219ENST00000518824 OLFML3Q9NRN5 406 aa14.52□□□□□ -0.09
VEGFA-219ENST00000518824 TOPORSQ9NS56 1045 aaPredicted RBP14.52□□□□□ -0.09
VEGFA-219ENST00000518824 C2orf16Q68DN1 1984 aa14.51□□□□□ -0.09
VEGFA-219ENST00000518824 MUC3AQ02505 3323 aa14.51□□□□□ -0.09
VEGFA-219ENST00000518824 PPEF2O14830 753 aa14.51□□□□□ -0.09
VEGFA-219ENST00000518824 ACTN4O43707 911 aaKnown RBP14.51□□□□□ -0.09
VEGFA-219ENST00000518824 CLTAP09496 248 aa14.51□□□□□ -0.09
VEGFA-219ENST00000518824 PFKFB1P16118 471 aa14.51□□□□□ -0.09
VEGFA-219ENST00000518824 TKTP29401 623 aaKnown RBP14.51□□□□□ -0.09
VEGFA-219ENST00000518824 ASIC1P78348 528 aa14.51□□□□□ -0.09
VEGFA-219ENST00000518824 KRT85P78386 507 aa14.51□□□□□ -0.09
VEGFA-219ENST00000518824 ZBTB6Q15916 424 aa14.51□□□□□ -0.09
VEGFA-219ENST00000518824 USP41Q3LFD5 358 aa14.51□□□□□ -0.09
VEGFA-219ENST00000518824 PUS10Q3MIT2 529 aaKnown RBP14.51□□□□□ -0.09
VEGFA-219ENST00000518824 RARS2Q5T160 578 aaKnown RBP14.51□□□□□ -0.09
VEGFA-219ENST00000518824 L1TD1Q5T7N2 865 aaKnown RBP14.51□□□□□ -0.09
VEGFA-219ENST00000518824 RSPO2Q6UXX9 243 aaPredicted RBP14.51□□□□□ -0.09
VEGFA-219ENST00000518824 PALB2Q86YC2 1186 aa14.51□□□□□ -0.09
VEGFA-219ENST00000518824 IQUBQ8NA54 791 aa14.51□□□□□ -0.09
VEGFA-219ENST00000518824 LNX1Q8TBB1 728 aaPredicted RBP14.51□□□□□ -0.09
VEGFA-219ENST00000518824 CASP10Q92851 521 aa14.51□□□□□ -0.09
VEGFA-219ENST00000518824 FAM84AQ96KN4 292 aa14.51□□□□□ -0.09
VEGFA-219ENST00000518824 C7orf25Q9BPX7 421 aa14.51□□□□□ -0.09
VEGFA-219ENST00000518824 GOLPH3LQ9H4A5 285 aa14.51□□□□□ -0.09
VEGFA-219ENST00000518824 SEL1LQ9UBV2 794 aa14.51□□□□□ -0.09
VEGFA-219ENST00000518824 CPSF3Q9UKF6 684 aaKnown RBP14.51□□□□□ -0.09
VEGFA-219ENST00000518824 KCNH3Q9ULD8 1083 aa14.51□□□□□ -0.09
VEGFA-219ENST00000518824 STYXL1Q9Y6J8 313 aa14.51□□□□□ -0.09
VEGFA-219ENST00000518824 NCOR1O75376 2440 aa14.51□□□□□ -0.09
VEGFA-219ENST00000518824 SF3B1O75533 1304 aaKnown RBP eCLIP14.5□□□□□ -0.096e-7■■■■■ 31.1
VEGFA-219ENST00000518824 C19orf67A6NJJ6 358 aa14.5□□□□□ -0.09
VEGFA-219ENST00000518824 TMEM189-UBE2V1I3L0A0 370 aa14.5□□□□□ -0.09
VEGFA-219ENST00000518824 PODXLO00592 558 aa14.5□□□□□ -0.09
VEGFA-219ENST00000518824 ADRB2P07550 413 aa14.5□□□□□ -0.09
VEGFA-219ENST00000518824 NFICP08651 508 aa14.5□□□□□ -0.09
VEGFA-219ENST00000518824 SP100P23497 879 aaPredicted RBP14.5□□□□□ -0.09
VEGFA-219ENST00000518824 BMS1Q14692 1282 aaKnown RBP14.5□□□□□ -0.09
VEGFA-219ENST00000518824 SCARA3Q6AZY7 606 aa14.5□□□□□ -0.09
VEGFA-219ENST00000518824 ADALQ6DHV7 355 aa14.5□□□□□ -0.09
VEGFA-219ENST00000518824 KIAA1841Q6NSI8 718 aa14.5□□□□□ -0.09
VEGFA-219ENST00000518824 DCLRE1AQ6PJP8 1040 aa14.5□□□□□ -0.09
VEGFA-219ENST00000518824 CCDC65Q8IXS2 484 aa14.5□□□□□ -0.09
VEGFA-219ENST00000518824 GJD3Q8N144 294 aa14.5□□□□□ -0.09
VEGFA-219ENST00000518824 TMEM87AQ8NBN3 555 aa14.5□□□□□ -0.09
VEGFA-219ENST00000518824 FAM212AQ96EL1 285 aa14.5□□□□□ -0.09
VEGFA-219ENST00000518824 KIF12Q96FN5 646 aa14.5□□□□□ -0.09
VEGFA-219ENST00000518824 FBXL18Q96ME1 805 aa14.5□□□□□ -0.09
VEGFA-219ENST00000518824 CLSTN3Q9BQT9 956 aa14.5□□□□□ -0.09
VEGFA-219ENST00000518824 EMILIN2Q9BXX0 1053 aa14.5□□□□□ -0.09
VEGFA-219ENST00000518824 CUEDC2Q9H467 287 aa14.5□□□□□ -0.09
VEGFA-219ENST00000518824 EPHX3Q9H6B9 360 aa14.5□□□□□ -0.09
VEGFA-219ENST00000518824 FAM13BQ9NYF5 915 aa14.5□□□□□ -0.09
VEGFA-219ENST00000518824 HPSEQ9Y251 543 aa14.5□□□□□ -0.09
VEGFA-219ENST00000518824 GOLGA8IPA6NC78 632 aa14.49□□□□□ -0.09
VEGFA-219ENST00000518824 GOLGA8JA6NMD2 632 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms