RNA–Protein interactions for RNA: ENST00000518110.1

SREK1-204, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 2

Gene SREK1, Length 763 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-204ENST00000518110 NHLH2Q02577 135 aa6.22□□□□□ -1.41
SREK1-204ENST00000518110 TLE1Q04724 770 aa6.22□□□□□ -1.41
SREK1-204ENST00000518110 AGAP9Q5VTM2 703 aa6.22□□□□□ -1.41
SREK1-204ENST00000518110 ZFPM1Q8IX07 1006 aa6.22□□□□□ -1.41
SREK1-204ENST00000518110 MIER2Q8N344 545 aa6.22□□□□□ -1.41
SREK1-204ENST00000518110 DCLRE1CQ96SD1 692 aaKnown RBP6.22□□□□□ -1.41
SREK1-204ENST00000518110 CEP89Q96ST8 783 aa6.22□□□□□ -1.41
SREK1-204ENST00000518110 SLC46A2Q9BY10 475 aa6.22□□□□□ -1.41
SREK1-204ENST00000518110 CDH19Q9H159 772 aa6.22□□□□□ -1.41
SREK1-204ENST00000518110 TDP1Q9NUW8 608 aa6.22□□□□□ -1.41
SREK1-204ENST00000518110 SORCS3Q9UPU3 1222 aa6.22□□□□□ -1.41
SREK1-204ENST00000518110 FAM20BO75063 409 aa6.21□□□□□ -1.42
SREK1-204ENST00000518110 POU2F2P09086 479 aa6.21□□□□□ -1.42
SREK1-204ENST00000518110 C6P13671 934 aa6.21□□□□□ -1.42
SREK1-204ENST00000518110 AKAP5P24588 427 aa6.21□□□□□ -1.42
SREK1-204ENST00000518110 CHN2P52757 468 aa6.21□□□□□ -1.42
SREK1-204ENST00000518110 FAM189BP81408 668 aa6.21□□□□□ -1.42
SREK1-204ENST00000518110 RAB39AQ14964 217 aa6.21□□□□□ -1.42
SREK1-204ENST00000518110 ODR4Q5SWX8 454 aa6.21□□□□□ -1.42
SREK1-204ENST00000518110 PPP4R3AQ6IN85 833 aa6.21□□□□□ -1.42
SREK1-204ENST00000518110 LRRC55Q6ZSA7 311 aa6.21□□□□□ -1.42
SREK1-204ENST00000518110 USP45Q70EL2 814 aa6.21□□□□□ -1.42
SREK1-204ENST00000518110 GDF7Q7Z4P5 450 aa6.21□□□□□ -1.42
SREK1-204ENST00000518110 RHOT2Q8IXI1 618 aa6.21□□□□□ -1.42
SREK1-204ENST00000518110 RAVER1Q8IY67 606 aaKnown RBP6.21□□□□□ -1.42
SREK1-204ENST00000518110 TMX3Q96JJ7 454 aa6.21□□□□□ -1.42
SREK1-204ENST00000518110 C11orf54Q9H0W9 315 aaPredicted RBP6.21□□□□□ -1.42
SREK1-204ENST00000518110 ZNF768Q9H5H4 540 aaKnown RBP6.21□□□□□ -1.42
SREK1-204ENST00000518110 AASDHPPTQ9NRN7 309 aa6.21□□□□□ -1.42
SREK1-204ENST00000518110 CALCOCO1Q9P1Z2 691 aa6.21□□□□□ -1.42
SREK1-204ENST00000518110 DKK2Q9UBU2 259 aa6.21□□□□□ -1.42
SREK1-204ENST00000518110 RUVBL1Q9Y265 456 aaKnown RBP6.21□□□□□ -1.42
SREK1-204ENST00000518110 ZNF185O15231 689 aa6.2□□□□□ -1.42
SREK1-204ENST00000518110 PDCP20941 246 aa6.2□□□□□ -1.42
SREK1-204ENST00000518110 GCSHP23434 173 aa6.2□□□□□ -1.42
SREK1-204ENST00000518110 SLC6A4P31645 630 aa6.2□□□□□ -1.42
SREK1-204ENST00000518110 RAB27AP51159 221 aa6.2□□□□□ -1.42
SREK1-204ENST00000518110 RAP2BP61225 183 aa6.2□□□□□ -1.42
SREK1-204ENST00000518110 LSM12Q3MHD2 195 aaKnown RBP6.2□□□□□ -1.42
SREK1-204ENST00000518110 ZNF529Q6P280 563 aa6.2□□□□□ -1.42
SREK1-204ENST00000518110 ANKRD13AQ8IZ07 590 aa6.2□□□□□ -1.42
SREK1-204ENST00000518110 SLC25A43Q8WUT9 341 aaPredicted RBP6.2□□□□□ -1.42
SREK1-204ENST00000518110 LENG9Q96B70 501 aa6.2□□□□□ -1.42
SREK1-204ENST00000518110 TEX101Q9BY14 249 aa6.2□□□□□ -1.42
SREK1-204ENST00000518110 GTPBP4Q9BZE4 634 aaKnown RBP6.2□□□□□ -1.42
SREK1-204ENST00000518110 SLC12A5Q9H2X9 1139 aa6.2□□□□□ -1.42
SREK1-204ENST00000518110 IP6K2Q9UHH9 426 aa6.2□□□□□ -1.42
SREK1-204ENST00000518110 PNMA8BQ9ULN7 279 aaPredicted RBP6.2□□□□□ -1.42
SREK1-204ENST00000518110 ANKRD6Q9Y2G4 727 aa6.2□□□□□ -1.42
SREK1-204ENST00000518110 HS3ST4Q9Y661 456 aa6.2□□□□□ -1.42
SREK1-204ENST00000518110 RFPL1O75677 317 aa6.19□□□□□ -1.42
SREK1-204ENST00000518110 RECQL4O94761 1208 aa6.19□□□□□ -1.42
SREK1-204ENST00000518110 SCAF4O95104 1147 aaKnown RBP6.19□□□□□ -1.42
SREK1-204ENST00000518110 PF4V1P10720 104 aa6.19□□□□□ -1.42
SREK1-204ENST00000518110 VCAM1P19320 739 aa6.19□□□□□ -1.42
SREK1-204ENST00000518110 ACVRL1P37023 503 aa6.19□□□□□ -1.42
SREK1-204ENST00000518110 ZNF280AP59817 542 aaPredicted RBP6.19□□□□□ -1.42
SREK1-204ENST00000518110 RNASE9P60153 205 aaKnown RBP6.19□□□□□ -1.42
SREK1-204ENST00000518110 UBXN2BQ14CS0 331 aa6.19□□□□□ -1.42
SREK1-204ENST00000518110 PDCD4Q53EL6 469 aaKnown RBP6.19□□□□□ -1.42
SREK1-204ENST00000518110 CATIPQ7Z7H3 387 aa6.19□□□□□ -1.42
SREK1-204ENST00000518110 ZNF276Q8N554 614 aa6.19□□□□□ -1.42
SREK1-204ENST00000518110 CPT1CQ8TCG5 803 aa6.19□□□□□ -1.42
SREK1-204ENST00000518110 EIF2B4Q9UI10 523 aaKnown RBP6.19□□□□□ -1.42
SREK1-204ENST00000518110 GAGE12BA1L429 117 aa6.18□□□□□ -1.42
SREK1-204ENST00000518110 GAGE12HA6NDE8 117 aa6.18□□□□□ -1.42
SREK1-204ENST00000518110 NT5C1B-RDH14C9J2C7 533 aa6.18□□□□□ -1.42
SREK1-204ENST00000518110 NPIPB8E9PQR5 432 aa6.18□□□□□ -1.42
SREK1-204ENST00000518110 DTNBO60941 627 aa6.18□□□□□ -1.42
SREK1-204ENST00000518110 PRSS23O95084 383 aa6.18□□□□□ -1.42
SREK1-204ENST00000518110 IL33O95760 270 aa6.18□□□□□ -1.42
SREK1-204ENST00000518110 POMCP01189 267 aa6.18□□□□□ -1.42
SREK1-204ENST00000518110 SBK3P0C264 359 aa6.18□□□□□ -1.42
SREK1-204ENST00000518110 ALAS1P13196 640 aa6.18□□□□□ -1.42
SREK1-204ENST00000518110 SLC6A2P23975 617 aa6.18□□□□□ -1.42
SREK1-204ENST00000518110 BEAN1Q3B7T3 259 aa6.18□□□□□ -1.42
SREK1-204ENST00000518110 UBE3BQ7Z3V4 1068 aa6.18□□□□□ -1.42
SREK1-204ENST00000518110 TTC7BQ86TV6 843 aa6.18□□□□□ -1.42
SREK1-204ENST00000518110 ZNF483Q8TF39 744 aaPredicted RBP6.18□□□□□ -1.42
SREK1-204ENST00000518110 CLPTM1LQ96KA5 538 aa6.18□□□□□ -1.42
SREK1-204ENST00000518110 AIFM3Q96NN9 605 aa6.18□□□□□ -1.42
SREK1-204ENST00000518110 KLHL11Q9NVR0 708 aa6.18□□□□□ -1.42
SREK1-204ENST00000518110 TRPM5Q9NZQ8 1165 aa6.18□□□□□ -1.42
SREK1-204ENST00000518110 POGKQ9P215 609 aa6.18□□□□□ -1.42
SREK1-204ENST00000518110 FZD1Q9UP38 647 aa6.18□□□□□ -1.42
SREK1-204ENST00000518110 RPS6KA4O75676 772 aa6.17□□□□□ -1.42
SREK1-204ENST00000518110 HAUS5O94927 633 aa6.17□□□□□ -1.42
SREK1-204ENST00000518110 ZNF202O95125 648 aa6.17□□□□□ -1.42
SREK1-204ENST00000518110 ITGB1P05556 798 aa6.17□□□□□ -1.42
SREK1-204ENST00000518110 ELANEP08246 267 aa6.17□□□□□ -1.42
SREK1-204ENST00000518110 PTGS2P35354 604 aa6.17□□□□□ -1.42
SREK1-204ENST00000518110 SLFN5Q08AF3 891 aa6.17□□□□□ -1.42
SREK1-204ENST00000518110 NFE2Q16621 373 aaPredicted RBP6.17□□□□□ -1.42
SREK1-204ENST00000518110 PABPC1LQ4VXU2 614 aaKnown RBP6.17□□□□□ -1.42
SREK1-204ENST00000518110 ATAT1Q5SQI0 421 aa6.17□□□□□ -1.42
SREK1-204ENST00000518110 MED25Q71SY5 747 aa6.17□□□□□ -1.42
SREK1-204ENST00000518110 MRGPREQ86SM8 312 aa6.17□□□□□ -1.42
SREK1-204ENST00000518110 RSPH3Q86UC2 560 aa6.17□□□□□ -1.42
SREK1-204ENST00000518110 FAM9AQ8IZU1 332 aaPredicted RBP6.17□□□□□ -1.42
SREK1-204ENST00000518110 IL17RDQ8NFM7 739 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms