RNA–Protein interactions for RNA: ENST00000517940.1

AP3B1-203, Transcript of adaptor related protein complex 3 subunit beta 1, humanhuman

TSL 2

Gene AP3B1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1-203ENST00000517940 POP1Q99575 1024 aaKnown RBP12.85□□□□□ -0.35
AP3B1-203ENST00000517940 NKX2-4Q9H2Z4 354 aa12.85□□□□□ -0.35
AP3B1-203ENST00000517940 RPF1Q9H9Y2 349 aaKnown RBP12.85□□□□□ -0.35
AP3B1-203ENST00000517940 ANO10Q9NW15 660 aa12.85□□□□□ -0.35
AP3B1-203ENST00000517940 MARCH5Q9NX47 278 aa12.85□□□□□ -0.35
AP3B1-203ENST00000517940 INSL6Q9Y581 213 aa12.85□□□□□ -0.35
AP3B1-203ENST00000517940 PCDHA11Q9Y5I1 949 aa12.85□□□□□ -0.35
AP3B1-203ENST00000517940 MYO9BQ13459 2157 aa12.84□□□□□ -0.35
AP3B1-203ENST00000517940 MYO7AQ13402 2215 aa12.84□□□□□ -0.35
AP3B1-203ENST00000517940 LRRIQ3A6PVS8 624 aaPredicted RBP12.84□□□□□ -0.35
AP3B1-203ENST00000517940 MAPK13O15264 365 aa12.84□□□□□ -0.35
AP3B1-203ENST00000517940 EXOC3O60645 756 aa12.84□□□□□ -0.35
AP3B1-203ENST00000517940 ITGB1P05556 798 aa12.84□□□□□ -0.35
AP3B1-203ENST00000517940 TRIM49P0CI25 452 aa12.84□□□□□ -0.35
AP3B1-203ENST00000517940 TRIM49CP0CI26 452 aa12.84□□□□□ -0.35
AP3B1-203ENST00000517940 DNAJB2P25686 324 aa12.84□□□□□ -0.35
AP3B1-203ENST00000517940 PPP1R2P41236 205 aa12.84□□□□□ -0.35
AP3B1-203ENST00000517940 SLC11A1P49279 550 aa12.84□□□□□ -0.35
AP3B1-203ENST00000517940 SMAD3P84022 425 aaKnown RBP12.84□□□□□ -0.35
AP3B1-203ENST00000517940 FKBP3Q00688 224 aaKnown RBP12.84□□□□□ -0.35
AP3B1-203ENST00000517940 GRIK3Q13003 919 aa12.84□□□□□ -0.35
AP3B1-203ENST00000517940 CEP135Q66GS9 1140 aa12.84□□□□□ -0.35
AP3B1-203ENST00000517940 SASS6Q6UVJ0 657 aa12.84□□□□□ -0.35
AP3B1-203ENST00000517940 DHX40Q8IX18 779 aaKnown RBP12.84□□□□□ -0.35
AP3B1-203ENST00000517940 PARD3BQ8TEW8 1205 aa12.84□□□□□ -0.35
AP3B1-203ENST00000517940 LRCH3Q96II8 777 aa12.84□□□□□ -0.35
AP3B1-203ENST00000517940 C17orf80Q9BSJ5 609 aa12.84□□□□□ -0.35
AP3B1-203ENST00000517940 VN1R3Q9BXE9 311 aa12.84□□□□□ -0.35
AP3B1-203ENST00000517940 PLEKHA5Q9HAU0 1116 aa12.84□□□□□ -0.35
AP3B1-203ENST00000517940 UBN1Q9NPG3 1134 aa12.84□□□□□ -0.35
AP3B1-203ENST00000517940 SAMSN1Q9NSI8 373 aaKnown RBP12.84□□□□□ -0.35
AP3B1-203ENST00000517940 SIX4Q9UIU6 781 aa12.84□□□□□ -0.35
AP3B1-203ENST00000517940 ZNF233A6NK53 670 aa12.83□□□□□ -0.36
AP3B1-203ENST00000517940 HOXA2O43364 376 aa12.83□□□□□ -0.36
AP3B1-203ENST00000517940 LRRN2O75325 713 aa12.83□□□□□ -0.36
AP3B1-203ENST00000517940 LDHAP00338 332 aaKnown RBP12.83□□□□□ -0.36
AP3B1-203ENST00000517940 MARSP56192 900 aaKnown RBP12.83□□□□□ -0.36
AP3B1-203ENST00000517940 ZNF445P59923 1031 aa12.83□□□□□ -0.36
AP3B1-203ENST00000517940 PPP2R3AQ06190 1150 aa12.83□□□□□ -0.36
AP3B1-203ENST00000517940 PPP3CAQ08209 521 aa12.83□□□□□ -0.36
AP3B1-203ENST00000517940 STIM1Q13586 685 aa12.83□□□□□ -0.36
AP3B1-203ENST00000517940 BTG3Q14201 252 aaPredicted RBP12.83□□□□□ -0.36
AP3B1-203ENST00000517940 KYAT1Q16773 422 aa12.83□□□□□ -0.36
AP3B1-203ENST00000517940 CDKAL1Q5VV42 579 aa12.83□□□□□ -0.36
AP3B1-203ENST00000517940 SPATA1Q5VX52 437 aa12.83□□□□□ -0.36
AP3B1-203ENST00000517940 C15orf39Q6ZRI6 1047 aa12.83□□□□□ -0.36
AP3B1-203ENST00000517940 APBB1IPQ7Z5R6 666 aaPredicted RBP12.83□□□□□ -0.36
AP3B1-203ENST00000517940 FAM186BQ8IYM0 893 aa12.83□□□□□ -0.36
AP3B1-203ENST00000517940 LRRC43Q8N309 656 aa12.83□□□□□ -0.36
AP3B1-203ENST00000517940 CSGALNACT2Q8N6G5 542 aa12.83□□□□□ -0.36
AP3B1-203ENST00000517940 C1orf127Q8N9H9 656 aa12.83□□□□□ -0.36
AP3B1-203ENST00000517940 ENOX1Q8TC92 643 aaKnown RBP12.83□□□□□ -0.36
AP3B1-203ENST00000517940 NOC3LQ8WTT2 800 aaKnown RBP12.83□□□□□ -0.36
AP3B1-203ENST00000517940 KIF12Q96FN5 646 aa12.83□□□□□ -0.36
AP3B1-203ENST00000517940 CEP63Q96MT8 703 aa12.83□□□□□ -0.36
AP3B1-203ENST00000517940 MKNK1Q9BUB5 465 aa12.83□□□□□ -0.36
AP3B1-203ENST00000517940 SRRTQ9BXP5 876 aaKnown RBP12.83□□□□□ -0.36
AP3B1-203ENST00000517940 TTYH1Q9H313 450 aaPredicted RBP12.83□□□□□ -0.36
AP3B1-203ENST00000517940 ASB7Q9H672 318 aa12.83□□□□□ -0.36
AP3B1-203ENST00000517940 KIAA1586Q9HCI6 787 aa12.83□□□□□ -0.36
AP3B1-203ENST00000517940 XIRP2A4UGR9 3374 aa12.83□□□□□ -0.36
AP3B1-203ENST00000517940 ANO9A1A5B4 782 aa12.82□□□□□ -0.36
AP3B1-203ENST00000517940 BICDL2A1A5D9 508 aa12.82□□□□□ -0.36
AP3B1-203ENST00000517940 CASTOR2A6NHX0 329 aa12.82□□□□□ -0.36
AP3B1-203ENST00000517940 NT5C1B-RDH14C9J2C7 533 aa12.82□□□□□ -0.36
AP3B1-203ENST00000517940 SLC16A3O15427 465 aaKnown RBP12.82□□□□□ -0.36
AP3B1-203ENST00000517940 THP07101 528 aa12.82□□□□□ -0.36
AP3B1-203ENST00000517940 GALTP07902 379 aa12.82□□□□□ -0.36
AP3B1-203ENST00000517940 CCDC192P0DO97 292 aa12.82□□□□□ -0.36
AP3B1-203ENST00000517940 ZNF18P17022 549 aa12.82□□□□□ -0.36
AP3B1-203ENST00000517940 YARSP54577 528 aaKnown RBP12.82□□□□□ -0.36
AP3B1-203ENST00000517940 BCAR1P56945 870 aa12.82□□□□□ -0.36
AP3B1-203ENST00000517940 CT47A1Q5JQC4 288 aaPredicted RBP12.82□□□□□ -0.36
AP3B1-203ENST00000517940 APTXQ7Z2E3 356 aaKnown RBP12.82□□□□□ -0.36
AP3B1-203ENST00000517940 FILIP1Q7Z7B0 1213 aa12.82□□□□□ -0.36
AP3B1-203ENST00000517940 HACE1Q8IYU2 909 aa12.82□□□□□ -0.36
AP3B1-203ENST00000517940 COLGALT1Q8NBJ5 622 aa12.82□□□□□ -0.36
AP3B1-203ENST00000517940 SLC35C1Q96A29 364 aa12.82□□□□□ -0.36
AP3B1-203ENST00000517940 CCDC127Q96BQ5 260 aa12.82□□□□□ -0.36
AP3B1-203ENST00000517940 FAM212AQ96EL1 285 aa12.82□□□□□ -0.36
AP3B1-203ENST00000517940 CGRRF1Q99675 332 aa12.82□□□□□ -0.36
AP3B1-203ENST00000517940 TSG101Q99816 390 aa12.82□□□□□ -0.36
AP3B1-203ENST00000517940 BPIFA3Q9BQP9 254 aa12.82□□□□□ -0.36
AP3B1-203ENST00000517940 ZBED2Q9BTP6 218 aa12.82□□□□□ -0.36
AP3B1-203ENST00000517940 MTMR12Q9C0I1 747 aa12.82□□□□□ -0.36
AP3B1-203ENST00000517940 INTS13Q9NVM9 706 aa12.82□□□□□ -0.36
AP3B1-203ENST00000517940 DERAQ9Y315 318 aa12.82□□□□□ -0.36
AP3B1-203ENST00000517940 C2CD2Q9Y426 696 aa12.82□□□□□ -0.36
AP3B1-203ENST00000517940 NFE2L3Q9Y4A8 694 aa12.82□□□□□ -0.36
AP3B1-203ENST00000517940 COL6A3P12111 3177 aa12.82□□□□□ -0.36
AP3B1-203ENST00000517940 CETN3O15182 167 aa12.81□□□□□ -0.36
AP3B1-203ENST00000517940 SPTLC1O15269 473 aa12.81□□□□□ -0.36
AP3B1-203ENST00000517940 ZC3H11AO75152 810 aaKnown RBP eCLIP12.81□□□□□ -0.36
AP3B1-203ENST00000517940 LETM1O95202 739 aaPredicted RBP12.81□□□□□ -0.36
AP3B1-203ENST00000517940 KIF4AO95239 1232 aa12.81□□□□□ -0.36
AP3B1-203ENST00000517940 IL18RAPO95256 599 aa12.81□□□□□ -0.36
AP3B1-203ENST00000517940 VNN1O95497 513 aa12.81□□□□□ -0.36
AP3B1-203ENST00000517940 C4BPAP04003 597 aaKnown RBP12.81□□□□□ -0.36
AP3B1-203ENST00000517940 DNAJB1P25685 340 aa12.81□□□□□ -0.36
AP3B1-203ENST00000517940 RPL13P26373 211 aaKnown RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms