RNA–Protein interactions for RNA: ENST00000517921.1

PABPC1-203, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 885 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-203ENST00000517921 LRMPQ12912 555 aa11.44□□□□□ -0.58
PABPC1-203ENST00000517921 DSC3Q14574 896 aa11.44□□□□□ -0.58
PABPC1-203ENST00000517921 ZACNQ401N2 412 aa11.44□□□□□ -0.58
PABPC1-203ENST00000517921 HS1BP3Q53T59 392 aa11.44□□□□□ -0.58
PABPC1-203ENST00000517921 KLHDC7AQ5VTJ3 777 aa11.44□□□□□ -0.58
PABPC1-203ENST00000517921 TDRD10Q5VZ19 366 aaKnown RBP11.44□□□□□ -0.58
PABPC1-203ENST00000517921 TWF2Q6IBS0 349 aaKnown RBP11.44□□□□□ -0.58
PABPC1-203ENST00000517921 CNGA4Q8IV77 575 aa11.44□□□□□ -0.58
PABPC1-203ENST00000517921 OR5B17Q8NGF7 314 aa11.44□□□□□ -0.58
PABPC1-203ENST00000517921 CPLX3Q8WVH0 158 aa11.44□□□□□ -0.58
PABPC1-203ENST00000517921 BAP1Q92560 729 aa11.44□□□□□ -0.58
PABPC1-203ENST00000517921 FAM212AQ96EL1 285 aa11.44□□□□□ -0.58
PABPC1-203ENST00000517921 SNX27Q96L92 541 aa11.44□□□□□ -0.58
PABPC1-203ENST00000517921 ACAP3Q96P50 834 aa11.44□□□□□ -0.58
PABPC1-203ENST00000517921 TRIM6Q9C030 488 aaPredicted RBP11.44□□□□□ -0.58
PABPC1-203ENST00000517921 MTMR12Q9C0I1 747 aa11.44□□□□□ -0.58
PABPC1-203ENST00000517921 ASB7Q9H672 318 aa11.44□□□□□ -0.58
PABPC1-203ENST00000517921 CHST12Q9NRB3 414 aa11.44□□□□□ -0.58
PABPC1-203ENST00000517921 CEP72Q9P209 647 aa11.44□□□□□ -0.58
PABPC1-203ENST00000517921 AJAP1Q9UKB5 411 aaPredicted RBP11.44□□□□□ -0.58
PABPC1-203ENST00000517921 HES2Q9Y543 173 aa11.44□□□□□ -0.58
PABPC1-203ENST00000517921 IPPQ9Y573 584 aa11.44□□□□□ -0.58
PABPC1-203ENST00000517921 FHOD1Q9Y613 1164 aa11.44□□□□□ -0.58
PABPC1-203ENST00000517921 LRRN2O75325 713 aa11.43□□□□□ -0.58
PABPC1-203ENST00000517921 VNN1O95497 513 aa11.43□□□□□ -0.58
PABPC1-203ENST00000517921 HLA-DRAP01903 254 aa11.43□□□□□ -0.58
PABPC1-203ENST00000517921 UCHL3P15374 230 aa11.43□□□□□ -0.58
PABPC1-203ENST00000517921 KRT9P35527 623 aa11.43□□□□□ -0.58
PABPC1-203ENST00000517921 AP3M2P53677 418 aa11.43□□□□□ -0.58
PABPC1-203ENST00000517921 CCZ1BP86790 482 aa11.43□□□□□ -0.58
PABPC1-203ENST00000517921 CCZ1P86791 482 aaPredicted RBP11.43□□□□□ -0.58
PABPC1-203ENST00000517921 CETN1Q12798 172 aa11.43□□□□□ -0.58
PABPC1-203ENST00000517921 BIRC3Q13489 604 aa11.43□□□□□ -0.58
PABPC1-203ENST00000517921 GPNMBQ14956 572 aa11.43□□□□□ -0.58
PABPC1-203ENST00000517921 LRRC26Q2I0M4 334 aa11.43□□□□□ -0.58
PABPC1-203ENST00000517921 JADE1Q6IE81 842 aa11.43□□□□□ -0.58
PABPC1-203ENST00000517921 LRRC8AQ8IWT6 810 aa11.43□□□□□ -0.58
PABPC1-203ENST00000517921 C7orf61Q8IZ16 206 aa11.43□□□□□ -0.58
PABPC1-203ENST00000517921 SMG8Q8ND04 991 aaKnown RBP11.43□□□□□ -0.58
PABPC1-203ENST00000517921 EHBP1Q8NDI1 1231 aa11.43□□□□□ -0.58
PABPC1-203ENST00000517921 FBXL13Q8NEE6 735 aa11.43□□□□□ -0.58
PABPC1-203ENST00000517921 TAS1R2Q8TE23 839 aa11.43□□□□□ -0.58
PABPC1-203ENST00000517921 LINC01599Q8WXQ3 324 aa11.43□□□□□ -0.58
PABPC1-203ENST00000517921 TRIM44Q96DX7 344 aaPredicted RBP11.43□□□□□ -0.58
PABPC1-203ENST00000517921 ZNF830Q96NB3 372 aaPredicted RBP11.43□□□□□ -0.58
PABPC1-203ENST00000517921 EDEM3Q9BZQ6 932 aa11.43□□□□□ -0.58
PABPC1-203ENST00000517921 PLEKHA5Q9HAU0 1116 aa11.43□□□□□ -0.58
PABPC1-203ENST00000517921 ABHD10Q9NUJ1 306 aa11.43□□□□□ -0.58
PABPC1-203ENST00000517921 FAM105AQ9NUU6 356 aa11.43□□□□□ -0.58
PABPC1-203ENST00000517921 APEX2Q9UBZ4 518 aa11.43□□□□□ -0.58
PABPC1-203ENST00000517921 FBXL5Q9UKA1 691 aa11.43□□□□□ -0.58
PABPC1-203ENST00000517921 TBX21Q9UL17 535 aa11.43□□□□□ -0.58
PABPC1-203ENST00000517921 PCDHB2Q9Y5E7 798 aa11.43□□□□□ -0.58
PABPC1-203ENST00000517921 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.43□□□□□ -0.581e-23■■■□□ 16
PABPC1-203ENST00000517921 DCDC2CA8MYV0 355 aa11.42□□□□□ -0.58
PABPC1-203ENST00000517921 NBNO60934 754 aa11.42□□□□□ -0.58
PABPC1-203ENST00000517921 TMEM191BP0C7N4 346 aa11.42□□□□□ -0.58
PABPC1-203ENST00000517921 ZSCAN20P17040 1043 aaPredicted RBP11.42□□□□□ -0.58
PABPC1-203ENST00000517921 FECHP22830 423 aa11.42□□□□□ -0.58
PABPC1-203ENST00000517921 AKAP5P24588 427 aa11.42□□□□□ -0.58
PABPC1-203ENST00000517921 PIK3CAP42336 1068 aa11.42□□□□□ -0.58
PABPC1-203ENST00000517921 POLR2FP61218 127 aaKnown RBP11.42□□□□□ -0.58
PABPC1-203ENST00000517921 ZBED6P86452 979 aa11.42□□□□□ -0.58
PABPC1-203ENST00000517921 TFAMQ00059 246 aaKnown RBP11.42□□□□□ -0.58
PABPC1-203ENST00000517921 TMEM132DQ14C87 1099 aa11.42□□□□□ -0.58
PABPC1-203ENST00000517921 DUOXA2Q1HG44 320 aa11.42□□□□□ -0.58
PABPC1-203ENST00000517921 IQCEQ6IPM2 695 aa11.42□□□□□ -0.58
PABPC1-203ENST00000517921 PDXDC1Q6P996 788 aa11.42□□□□□ -0.58
PABPC1-203ENST00000517921 GJB7Q6PEY0 223 aa11.42□□□□□ -0.58
PABPC1-203ENST00000517921 ALKAL1Q6UXT8 129 aa11.42□□□□□ -0.58
PABPC1-203ENST00000517921 TMEM139Q8IV31 216 aa11.42□□□□□ -0.58
PABPC1-203ENST00000517921 CD302Q8IX05 232 aa11.42□□□□□ -0.58
PABPC1-203ENST00000517921 ANKRD36BP1Q96IX9 119 aa11.42□□□□□ -0.58
PABPC1-203ENST00000517921 PANX2Q96RD6 677 aa11.42□□□□□ -0.58
PABPC1-203ENST00000517921 DNAJC7Q99615 494 aa11.42□□□□□ -0.58
PABPC1-203ENST00000517921 TRAIPQ9BWF2 469 aa11.42□□□□□ -0.58
PABPC1-203ENST00000517921 APOL6Q9BWW8 343 aa11.42□□□□□ -0.58
PABPC1-203ENST00000517921 NAA15Q9BXJ9 866 aaKnown RBP11.42□□□□□ -0.58
PABPC1-203ENST00000517921 IFIH1Q9BYX4 1025 aaKnown RBP11.42□□□□□ -0.58
PABPC1-203ENST00000517921 WNT8AQ9H1J5 351 aa11.42□□□□□ -0.58
PABPC1-203ENST00000517921 CXCL16Q9H2A7 254 aa11.42□□□□□ -0.58
PABPC1-203ENST00000517921 HIPK3Q9H422 1215 aa11.42□□□□□ -0.58
PABPC1-203ENST00000517921 NLRC4Q9NPP4 1024 aa11.42□□□□□ -0.58
PABPC1-203ENST00000517921 RAB20Q9NX57 234 aa11.42□□□□□ -0.58
PABPC1-203ENST00000517921 CNTN3Q9P232 1028 aa11.42□□□□□ -0.58
PABPC1-203ENST00000517921 ATP11BQ9Y2G3 1177 aa11.42□□□□□ -0.58
PABPC1-203ENST00000517921 LUC7L2Q9Y383 392 aaKnown RBP11.42□□□□□ -0.58
PABPC1-203ENST00000517921 C2CD2Q9Y426 696 aa11.42□□□□□ -0.58
PABPC1-203ENST00000517921 DAAM1Q9Y4D1 1078 aa11.42□□□□□ -0.58
PABPC1-203ENST00000517921 KIAA1671Q9BY89 1806 aa11.42□□□□□ -0.58
PABPC1-203ENST00000517921 MEIS3P2A8K0S8 358 aa11.41□□□□□ -0.58
PABPC1-203ENST00000517921 ZNF623O75123 536 aa11.41□□□□□ -0.58
PABPC1-203ENST00000517921 TNNC2P02585 160 aa11.41□□□□□ -0.58
PABPC1-203ENST00000517921 ATF7P17544 494 aaPredicted RBP11.41□□□□□ -0.58
PABPC1-203ENST00000517921 RFX1P22670 979 aa11.41□□□□□ -0.58
PABPC1-203ENST00000517921 RAB27AP51159 221 aa11.41□□□□□ -0.58
PABPC1-203ENST00000517921 YARSP54577 528 aaKnown RBP11.41□□□□□ -0.58
PABPC1-203ENST00000517921 JAM2P57087 298 aa11.41□□□□□ -0.58
PABPC1-203ENST00000517921 NCOA4Q13772 614 aa11.41□□□□□ -0.58
PABPC1-203ENST00000517921 PLEKHG4Q58EX7 1191 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms