RNA–Protein interactions for RNA: ENST00000517904.1

CTNNA1-205, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-205ENST00000517904 ADCY1Q08828 1119 aa12.56□□□□□ -0.4
CTNNA1-205ENST00000517904 STK3Q13188 491 aa12.56□□□□□ -0.4
CTNNA1-205ENST00000517904 LPAL2Q16609 132 aa12.56□□□□□ -0.4
CTNNA1-205ENST00000517904 TANGO2Q6ICL3 276 aa12.56□□□□□ -0.4
CTNNA1-205ENST00000517904 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.56□□□□□ -0.4
CTNNA1-205ENST00000517904 RUFY3Q7L099 469 aa12.56□□□□□ -0.4
CTNNA1-205ENST00000517904 FAM126AQ9BYI3 521 aaPredicted RBP12.56□□□□□ -0.4
CTNNA1-205ENST00000517904 PDZD7Q9H5P4 517 aa12.56□□□□□ -0.4
CTNNA1-205ENST00000517904 ANKEF1Q9NU02 776 aa12.56□□□□□ -0.4
CTNNA1-205ENST00000517904 MTRRQ9UBK8 725 aa12.56□□□□□ -0.4
CTNNA1-205ENST00000517904 GMEB2Q9UKD1 530 aa12.56□□□□□ -0.4
CTNNA1-205ENST00000517904 USP20Q9Y2K6 914 aa12.56□□□□□ -0.4
CTNNA1-205ENST00000517904 CDY1Q9Y6F8 540 aa12.56□□□□□ -0.4
CTNNA1-205ENST00000517904 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.56□□□□□ -0.4
CTNNA1-205ENST00000517904 WDFY3Q8IZQ1 3526 aa12.56□□□□□ -0.4
CTNNA1-205ENST00000517904 LRRIQ4A6NIV6 560 aa12.55□□□□□ -0.4
CTNNA1-205ENST00000517904 USO1O60763 962 aaKnown RBP12.55□□□□□ -0.4
CTNNA1-205ENST00000517904 EDN1P05305 212 aa12.55□□□□□ -0.4
CTNNA1-205ENST00000517904 SPEM2Q0P670 501 aa12.55□□□□□ -0.4
CTNNA1-205ENST00000517904 ELAVL2Q12926 359 aaKnown RBP12.55□□□□□ -0.4
CTNNA1-205ENST00000517904 GRM2Q14416 872 aa12.55□□□□□ -0.4
CTNNA1-205ENST00000517904 ST3GAL2Q16842 350 aa12.55□□□□□ -0.4
CTNNA1-205ENST00000517904 CDCA2Q69YH5 1023 aaPredicted RBP12.55□□□□□ -0.4
CTNNA1-205ENST00000517904 PDXDC1Q6P996 788 aa12.55□□□□□ -0.4
CTNNA1-205ENST00000517904 CD300LGQ6UXG3 332 aa12.55□□□□□ -0.4
CTNNA1-205ENST00000517904 NOSTRINQ8IVI9 506 aa12.55□□□□□ -0.4
CTNNA1-205ENST00000517904 SLFN12Q8IYM2 578 aa12.55□□□□□ -0.4
CTNNA1-205ENST00000517904 PIGOQ8TEQ8 1089 aa12.55□□□□□ -0.4
CTNNA1-205ENST00000517904 ZNF274Q96GC6 653 aaPredicted RBP12.55□□□□□ -0.4
CTNNA1-205ENST00000517904 PRIMPOLQ96LW4 560 aa12.55□□□□□ -0.4
CTNNA1-205ENST00000517904 CHRDQ9H2X0 955 aa12.55□□□□□ -0.4
CTNNA1-205ENST00000517904 FZD8Q9H461 694 aa12.55□□□□□ -0.4
CTNNA1-205ENST00000517904 ZSWIM6Q9HCJ5 1215 aa12.55□□□□□ -0.4
CTNNA1-205ENST00000517904 PRMT7Q9NVM4 692 aaPredicted RBP12.55□□□□□ -0.4
CTNNA1-205ENST00000517904 GDE1Q9NZC3 331 aa12.55□□□□□ -0.4
CTNNA1-205ENST00000517904 NDRG2Q9UN36 371 aaKnown RBP12.55□□□□□ -0.4
CTNNA1-205ENST00000517904 SPEGQ15772 3267 aa12.54□□□□□ -0.4
CTNNA1-205ENST00000517904 TRIP11Q15643 1979 aa12.54□□□□□ -0.4
CTNNA1-205ENST00000517904 TKTP29401 623 aaKnown RBP12.54□□□□□ -0.4
CTNNA1-205ENST00000517904 FAM187BQ17R55 369 aa12.54□□□□□ -0.4
CTNNA1-205ENST00000517904 GLRA4Q5JXX5 417 aa12.54□□□□□ -0.4
CTNNA1-205ENST00000517904 MAEAQ7L5Y9 396 aa12.54□□□□□ -0.4
CTNNA1-205ENST00000517904 C3orf58Q8NDZ4 430 aa12.54□□□□□ -0.4
CTNNA1-205ENST00000517904 DNASE1L2Q92874 299 aa12.54□□□□□ -0.4
CTNNA1-205ENST00000517904 ELSPBP1Q96BH3 223 aa12.54□□□□□ -0.4
CTNNA1-205ENST00000517904 TCEAL4Q96EI5 215 aa12.54□□□□□ -0.4
CTNNA1-205ENST00000517904 DDX27Q96GQ7 796 aaKnown RBP12.54□□□□□ -0.4
CTNNA1-205ENST00000517904 NAP1L4Q99733 375 aaKnown RBP12.54□□□□□ -0.4
CTNNA1-205ENST00000517904 AVENQ9NQS1 362 aaPredicted RBP12.54□□□□□ -0.4
CTNNA1-205ENST00000517904 MRPS17Q9Y2R5 130 aaKnown RBP12.54□□□□□ -0.4
CTNNA1-205ENST00000517904 TICRRQ7Z2Z1 1910 aa12.54□□□□□ -0.4
CTNNA1-205ENST00000517904 TMEM189-UBE2V1I3L0A0 370 aa12.53□□□□□ -0.4
CTNNA1-205ENST00000517904 I3L4J1 428 aa12.53□□□□□ -0.4
CTNNA1-205ENST00000517904 SLC30A4O14863 429 aa12.53□□□□□ -0.4
CTNNA1-205ENST00000517904 N4BP3O15049 544 aa12.53□□□□□ -0.4
CTNNA1-205ENST00000517904 B3GAT3O94766 335 aa12.53□□□□□ -0.4
CTNNA1-205ENST00000517904 BAG4O95429 457 aaKnown RBP12.53□□□□□ -0.4
CTNNA1-205ENST00000517904 CCR2P41597 374 aa12.53□□□□□ -0.4
CTNNA1-205ENST00000517904 CLCNKBP51801 687 aa12.53□□□□□ -0.4
CTNNA1-205ENST00000517904 NR5A1Q13285 461 aa12.53□□□□□ -0.4
CTNNA1-205ENST00000517904 PPM1JQ5JR12 505 aa12.53□□□□□ -0.4
CTNNA1-205ENST00000517904 FAM78AQ5JUQ0 283 aa12.53□□□□□ -0.4
CTNNA1-205ENST00000517904 PRSS36Q5K4E3 855 aa12.53□□□□□ -0.4
CTNNA1-205ENST00000517904 EEF1DP3Q658K8 133 aa12.53□□□□□ -0.4
CTNNA1-205ENST00000517904 LAIR1Q6GTX8 287 aa12.53□□□□□ -0.4
CTNNA1-205ENST00000517904 CPLX2Q6PUV4 134 aaKnown RBP12.53□□□□□ -0.4
CTNNA1-205ENST00000517904 MAMSTRQ6ZN01 415 aa12.53□□□□□ -0.4
CTNNA1-205ENST00000517904 RTL10Q7L3V2 364 aa12.53□□□□□ -0.4
CTNNA1-205ENST00000517904 BSNDQ8WZ55 320 aa12.53□□□□□ -0.4
CTNNA1-205ENST00000517904 CCDC43Q96MW1 224 aaKnown RBP12.53□□□□□ -0.4
CTNNA1-205ENST00000517904 PPP1R10Q96QC0 940 aaKnown RBP12.53□□□□□ -0.4
CTNNA1-205ENST00000517904 GOLGA2P5Q9HBQ8 144 aa12.53□□□□□ -0.4
CTNNA1-205ENST00000517904 PCDHA12Q9UN75 941 aa12.53□□□□□ -0.4
CTNNA1-205ENST00000517904 GDAQ9Y2T3 454 aa12.53□□□□□ -0.4
CTNNA1-205ENST00000517904 BACE2Q9Y5Z0 518 aa12.53□□□□□ -0.4
CTNNA1-205ENST00000517904 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.52□□□□□ -0.41
CTNNA1-205ENST00000517904 ARHGEF37A1IGU5 675 aa12.52□□□□□ -0.41
CTNNA1-205ENST00000517904 WNT7AO00755 349 aa12.52□□□□□ -0.41
CTNNA1-205ENST00000517904 RETP07949 1114 aa12.52□□□□□ -0.41
CTNNA1-205ENST00000517904 PTPN2P17706 415 aa12.52□□□□□ -0.41
CTNNA1-205ENST00000517904 BRCC3P46736 316 aa12.52□□□□□ -0.41
CTNNA1-205ENST00000517904 RBM25P49756 843 aaKnown RBP12.52□□□□□ -0.41
CTNNA1-205ENST00000517904 NRLP54845 237 aa12.52□□□□□ -0.41
CTNNA1-205ENST00000517904 ROR1Q01973 937 aa12.52□□□□□ -0.41
CTNNA1-205ENST00000517904 SCRN1Q12765 414 aa12.52□□□□□ -0.41
CTNNA1-205ENST00000517904 PRPF4BQ13523 1007 aaKnown RBP12.52□□□□□ -0.41
CTNNA1-205ENST00000517904 UPP1Q16831 310 aa12.52□□□□□ -0.41
CTNNA1-205ENST00000517904 SLC8B1Q6J4K2 584 aa12.52□□□□□ -0.41
CTNNA1-205ENST00000517904 MAP4K3Q8IVH8 894 aa12.52□□□□□ -0.41
CTNNA1-205ENST00000517904 CELF5Q8N6W0 485 aaKnown RBP12.52□□□□□ -0.41
CTNNA1-205ENST00000517904 ZNF461Q8TAF7 563 aa12.52□□□□□ -0.41
CTNNA1-205ENST00000517904 NETO1Q8TDF5 533 aa12.52□□□□□ -0.41
CTNNA1-205ENST00000517904 TNFRSF25Q93038 417 aa12.52□□□□□ -0.41
CTNNA1-205ENST00000517904 CORO1BQ9BR76 489 aa12.52□□□□□ -0.41
CTNNA1-205ENST00000517904 CCDC113Q9H0I3 377 aa12.52□□□□□ -0.41
CTNNA1-205ENST00000517904 TTC12Q9H892 705 aaPredicted RBP12.52□□□□□ -0.41
CTNNA1-205ENST00000517904 BRD9Q9H8M2 597 aa12.52□□□□□ -0.41
CTNNA1-205ENST00000517904 RAB23Q9ULC3 237 aa12.52□□□□□ -0.41
CTNNA1-205ENST00000517904 CYP46A1Q9Y6A2 500 aa12.52□□□□□ -0.41
CTNNA1-205ENST00000517904 NCANO14594 1321 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms