RNA–Protein interactions for RNA: ENST00000517880.1

CPEB4-203, Transcript of cytoplasmic polyadenylation element binding protein 4, humanhuman

TSL 1 (best) BASIC

Gene CPEB4, Length 1,416 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB4-203ENST00000517880 FAM53CQ9NYF3 392 aa11.55□□□□□ -0.56
CPEB4-203ENST00000517880 CPSF3Q9UKF6 684 aaKnown RBP11.55□□□□□ -0.56
CPEB4-203ENST00000517880 STXBP5LQ9Y2K9 1186 aa11.55□□□□□ -0.56
CPEB4-203ENST00000517880 H3BRB1 525 aa11.54□□□□□ -0.56
CPEB4-203ENST00000517880 PDE2AO00408 941 aaPredicted RBP11.54□□□□□ -0.56
CPEB4-203ENST00000517880 ZEB2O60315 1214 aa11.54□□□□□ -0.56
CPEB4-203ENST00000517880 FTCDO95954 541 aa11.54□□□□□ -0.56
CPEB4-203ENST00000517880 ITGBL1O95965 494 aaPredicted RBP11.54□□□□□ -0.56
CPEB4-203ENST00000517880 RHOXF2BP0C7M4 288 aa11.54□□□□□ -0.56
CPEB4-203ENST00000517880 CHRNB2P17787 502 aa11.54□□□□□ -0.56
CPEB4-203ENST00000517880 ADCYAP1R1P41586 468 aa11.54□□□□□ -0.56
CPEB4-203ENST00000517880 HUNKP57058 714 aa11.54□□□□□ -0.56
CPEB4-203ENST00000517880 MAP2K5Q13163 448 aa11.54□□□□□ -0.56
CPEB4-203ENST00000517880 SGSM1Q2NKQ1 1148 aa11.54□□□□□ -0.56
CPEB4-203ENST00000517880 MORN1Q5T089 497 aa11.54□□□□□ -0.56
CPEB4-203ENST00000517880 CST9Q5W186 159 aa11.54□□□□□ -0.56
CPEB4-203ENST00000517880 ACAD10Q6JQN1 1059 aa11.54□□□□□ -0.56
CPEB4-203ENST00000517880 DAAM2Q86T65 1068 aa11.54□□□□□ -0.56
CPEB4-203ENST00000517880 NOP9Q86U38 636 aaKnown RBP11.54□□□□□ -0.56
CPEB4-203ENST00000517880 NOA1Q8NC60 698 aaKnown RBP11.54□□□□□ -0.56
CPEB4-203ENST00000517880 OR6J1Q8NGC5 347 aa11.54□□□□□ -0.56
CPEB4-203ENST00000517880 ACTRT1Q8TDG2 376 aa11.54□□□□□ -0.56
CPEB4-203ENST00000517880 KAT5Q92993 513 aa11.54□□□□□ -0.56
CPEB4-203ENST00000517880 TRIM11Q96F44 468 aa11.54□□□□□ -0.56
CPEB4-203ENST00000517880 RPS6KC1Q96S38 1066 aa11.54□□□□□ -0.56
CPEB4-203ENST00000517880 RHOXF2Q9BQY4 288 aa11.54□□□□□ -0.56
CPEB4-203ENST00000517880 TUT1Q9H6E5 874 aaKnown RBP11.54□□□□□ -0.56
CPEB4-203ENST00000517880 CNTN6Q9UQ52 1028 aa11.54□□□□□ -0.56
CPEB4-203ENST00000517880 TRPM7Q96QT4 1865 aa11.54□□□□□ -0.56
CPEB4-203ENST00000517880 MIF4GDA9UHW6 222 aaKnown RBP11.53□□□□□ -0.56
CPEB4-203ENST00000517880 INO80B-WBP1J3KQ70 363 aa11.53□□□□□ -0.56
CPEB4-203ENST00000517880 TULP1O00294 542 aaPredicted RBP11.53□□□□□ -0.56
CPEB4-203ENST00000517880 ABLIM1O14639 778 aa11.53□□□□□ -0.56
CPEB4-203ENST00000517880 NCK2O43639 380 aa11.53□□□□□ -0.56
CPEB4-203ENST00000517880 FAM189A1O60320 539 aa11.53□□□□□ -0.56
CPEB4-203ENST00000517880 B4GALT4O60513 344 aa11.53□□□□□ -0.56
CPEB4-203ENST00000517880 VNN1O95497 513 aa11.53□□□□□ -0.56
CPEB4-203ENST00000517880 CYP1A2P05177 515 aa11.53□□□□□ -0.56
CPEB4-203ENST00000517880 EDN1P05305 212 aa11.53□□□□□ -0.56
CPEB4-203ENST00000517880 MMP3P08254 477 aa11.53□□□□□ -0.56
CPEB4-203ENST00000517880 MYBL1P10243 752 aa11.53□□□□□ -0.56
CPEB4-203ENST00000517880 MCF2P10911 925 aa11.53□□□□□ -0.56
CPEB4-203ENST00000517880 KRT5P13647 590 aa11.53□□□□□ -0.56
CPEB4-203ENST00000517880 SMPD1P17405 629 aa11.53□□□□□ -0.56
CPEB4-203ENST00000517880 YWHAEP62258 255 aaKnown RBP11.53□□□□□ -0.56
CPEB4-203ENST00000517880 FMO1Q01740 532 aa11.53□□□□□ -0.56
CPEB4-203ENST00000517880 MBTD1Q05BQ5 628 aa11.53□□□□□ -0.56
CPEB4-203ENST00000517880 CUL2Q13617 745 aa11.53□□□□□ -0.56
CPEB4-203ENST00000517880 NCOA4Q13772 614 aa11.53□□□□□ -0.56
CPEB4-203ENST00000517880 TMEM132AQ24JP5 1023 aa11.53□□□□□ -0.56
CPEB4-203ENST00000517880 C11orf63Q6NUN7 778 aa11.53□□□□□ -0.56
CPEB4-203ENST00000517880 MTHFD1LQ6UB35 978 aa11.53□□□□□ -0.56
CPEB4-203ENST00000517880 APBB1IPQ7Z5R6 666 aaPredicted RBP11.53□□□□□ -0.56
CPEB4-203ENST00000517880 NT5DC3Q86UY8 548 aa11.53□□□□□ -0.56
CPEB4-203ENST00000517880 SLC47A2Q86VL8 602 aa11.53□□□□□ -0.56
CPEB4-203ENST00000517880 NPLOC4Q8TAT6 608 aa11.53□□□□□ -0.56
CPEB4-203ENST00000517880 SLC20A1Q8WUM9 679 aa11.53□□□□□ -0.56
CPEB4-203ENST00000517880 DDX1Q92499 740 aaKnown RBP11.53□□□□□ -0.56
CPEB4-203ENST00000517880 HES6Q96HZ4 224 aa11.53□□□□□ -0.56
CPEB4-203ENST00000517880 NLRP4Q96MN2 994 aa11.53□□□□□ -0.56
CPEB4-203ENST00000517880 INO80BQ9C086 356 aaPredicted RBP11.53□□□□□ -0.56
CPEB4-203ENST00000517880 EPC1Q9H2F5 836 aa11.53□□□□□ -0.56
CPEB4-203ENST00000517880 ZNF446Q9NWS9 450 aa11.53□□□□□ -0.56
CPEB4-203ENST00000517880 UVRAGQ9P2Y5 699 aa11.53□□□□□ -0.56
CPEB4-203ENST00000517880 TTC7AQ9ULT0 858 aaPredicted RBP11.53□□□□□ -0.56
CPEB4-203ENST00000517880 Q9Y3F1 56 aa11.53□□□□□ -0.56
CPEB4-203ENST00000517880 TMCO5BA8MYB1 307 aa11.52□□□□□ -0.56
CPEB4-203ENST00000517880 CCDC188H7C350 402 aa11.52□□□□□ -0.56
CPEB4-203ENST00000517880 TNNC2P02585 160 aa11.52□□□□□ -0.56
CPEB4-203ENST00000517880 TFRCP02786 760 aaKnown RBP11.52□□□□□ -0.56
CPEB4-203ENST00000517880 CLTAP09496 248 aa11.52□□□□□ -0.56
CPEB4-203ENST00000517880 CXCR5P32302 372 aa11.52□□□□□ -0.56
CPEB4-203ENST00000517880 ZNF157P51786 506 aaPredicted RBP11.52□□□□□ -0.56
CPEB4-203ENST00000517880 CLCN3P51790 818 aa11.52□□□□□ -0.56
CPEB4-203ENST00000517880 TNNC1P63316 161 aa11.52□□□□□ -0.56
CPEB4-203ENST00000517880 TRPC3Q13507 836 aa11.52□□□□□ -0.56
CPEB4-203ENST00000517880 PCBP1Q15365 356 aaKnown RBP eCLIP11.52□□□□□ -0.56
CPEB4-203ENST00000517880 PPP2R5EQ16537 467 aa11.52□□□□□ -0.56
CPEB4-203ENST00000517880 CLEC16AQ2KHT3 1053 aa11.52□□□□□ -0.56
CPEB4-203ENST00000517880 TMEM63BQ5T3F8 832 aa11.52□□□□□ -0.56
CPEB4-203ENST00000517880 OLFML2BQ68BL8 750 aa11.52□□□□□ -0.56
CPEB4-203ENST00000517880 HDXQ7Z353 690 aa11.52□□□□□ -0.56
CPEB4-203ENST00000517880 ZBTB33Q86T24 672 aa11.52□□□□□ -0.56
CPEB4-203ENST00000517880 ZNF410Q86VK4 478 aa11.52□□□□□ -0.56
CPEB4-203ENST00000517880 RASAL3Q86YV0 1011 aa11.52□□□□□ -0.56
CPEB4-203ENST00000517880 KRT222Q8N1A0 295 aa11.52□□□□□ -0.56
CPEB4-203ENST00000517880 RASGEF1CQ8N431 466 aa11.52□□□□□ -0.56
CPEB4-203ENST00000517880 TRAPPC12Q8WVT3 735 aa11.52□□□□□ -0.56
CPEB4-203ENST00000517880 ANKRD36BP1Q96IX9 119 aa11.52□□□□□ -0.56
CPEB4-203ENST00000517880 VCPIP1Q96JH7 1222 aa11.52□□□□□ -0.56
CPEB4-203ENST00000517880 PNKPQ96T60 521 aa11.52□□□□□ -0.56
CPEB4-203ENST00000517880 PCDHB18PQ96TA0 734 aa11.52□□□□□ -0.56
CPEB4-203ENST00000517880 NAP1L3Q99457 506 aaPredicted RBP11.52□□□□□ -0.56
CPEB4-203ENST00000517880 THAP2Q9H0W7 228 aa11.52□□□□□ -0.56
CPEB4-203ENST00000517880 RPF1Q9H9Y2 349 aaKnown RBP11.52□□□□□ -0.56
CPEB4-203ENST00000517880 CTTNBP2NLQ9P2B4 639 aa11.52□□□□□ -0.56
CPEB4-203ENST00000517880 GTF3C4Q9UKN8 822 aa11.52□□□□□ -0.56
CPEB4-203ENST00000517880 A6NJR5 290 aa11.52□□□□□ -0.57
CPEB4-203ENST00000517880 KCNK3O14649 394 aa11.52□□□□□ -0.57
CPEB4-203ENST00000517880 BUB1BO60566 1050 aaPredicted RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms