RNA–Protein interactions for RNA: ENST00000517660.1

PDGFRB-203, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 611 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-203ENST00000517660 TEX28O15482 410 aa11.6□□□□□ -0.55
PDGFRB-203ENST00000517660 NARSO43776 548 aaKnown RBP11.6□□□□□ -0.55
PDGFRB-203ENST00000517660 C1RP00736 705 aa11.6□□□□□ -0.55
PDGFRB-203ENST00000517660 PLS3P13797 630 aa11.6□□□□□ -0.55
PDGFRB-203ENST00000517660 UBA7P41226 1012 aa11.6□□□□□ -0.55
PDGFRB-203ENST00000517660 SMTNP53814 917 aa11.6□□□□□ -0.55
PDGFRB-203ENST00000517660 SLC12A3P55017 1021 aa11.6□□□□□ -0.55
PDGFRB-203ENST00000517660 TMEM119Q4V9L6 283 aa11.6□□□□□ -0.55
PDGFRB-203ENST00000517660 ELMSAN1Q6PJG2 1045 aa11.6□□□□□ -0.55
PDGFRB-203ENST00000517660 TMC5Q6UXY8 1006 aa11.6□□□□□ -0.55
PDGFRB-203ENST00000517660 GPR149Q86SP6 731 aa11.6□□□□□ -0.55
PDGFRB-203ENST00000517660 RABGGTAQ92696 567 aa11.6□□□□□ -0.55
PDGFRB-203ENST00000517660 CALML4Q96GE6 196 aa11.6□□□□□ -0.55
PDGFRB-203ENST00000517660 PTPRHQ9HD43 1115 aa11.6□□□□□ -0.55
PDGFRB-203ENST00000517660 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.6□□□□□ -0.55
PDGFRB-203ENST00000517660 DENND4AQ7Z401 1863 aa11.59□□□□□ -0.55
PDGFRB-203ENST00000517660 VPS37CA5D8V6 355 aaPredicted RBP11.59□□□□□ -0.55
PDGFRB-203ENST00000517660 CASTOR2A6NHX0 329 aa11.59□□□□□ -0.55
PDGFRB-203ENST00000517660 SPDYE4A6NLX3 237 aa11.59□□□□□ -0.55
PDGFRB-203ENST00000517660 SLC16A4O15374 487 aa11.59□□□□□ -0.55
PDGFRB-203ENST00000517660 GLUD1P00367 558 aa11.59□□□□□ -0.55
PDGFRB-203ENST00000517660 MCF2P10911 925 aa11.59□□□□□ -0.55
PDGFRB-203ENST00000517660 LONP1P36776 959 aaKnown RBP11.59□□□□□ -0.55
PDGFRB-203ENST00000517660 GRM5P41594 1212 aa11.59□□□□□ -0.55
PDGFRB-203ENST00000517660 YARSP54577 528 aaKnown RBP11.59□□□□□ -0.55
PDGFRB-203ENST00000517660 CREMQ03060 361 aa11.59□□□□□ -0.55
PDGFRB-203ENST00000517660 STRN3Q13033 797 aa11.59□□□□□ -0.55
PDGFRB-203ENST00000517660 TDGQ13569 410 aa11.59□□□□□ -0.55
PDGFRB-203ENST00000517660 SF3A1Q15459 793 aaKnown RBP11.59□□□□□ -0.55
PDGFRB-203ENST00000517660 NAB2Q15742 525 aa11.59□□□□□ -0.55
PDGFRB-203ENST00000517660 TAS1R3Q7RTX0 852 aa11.59□□□□□ -0.55
PDGFRB-203ENST00000517660 CMASQ8NFW8 434 aaPredicted RBP11.59□□□□□ -0.55
PDGFRB-203ENST00000517660 HDAC7Q8WUI4 952 aa11.59□□□□□ -0.55
PDGFRB-203ENST00000517660 PAAF1Q9BRP4 392 aa11.59□□□□□ -0.55
PDGFRB-203ENST00000517660 TCHPQ9BT92 498 aa11.59□□□□□ -0.55
PDGFRB-203ENST00000517660 CCDC94Q9BW85 323 aaPredicted RBP11.59□□□□□ -0.55
PDGFRB-203ENST00000517660 TARS2Q9BW92 718 aaKnown RBP11.59□□□□□ -0.55
PDGFRB-203ENST00000517660 CDT1Q9H211 546 aa11.59□□□□□ -0.55
PDGFRB-203ENST00000517660 CXCL16Q9H2A7 254 aa11.59□□□□□ -0.55
PDGFRB-203ENST00000517660 FNIP2Q9P278 1114 aa11.59□□□□□ -0.55
PDGFRB-203ENST00000517660 USTQ9Y2C2 406 aa11.59□□□□□ -0.55
PDGFRB-203ENST00000517660 SF3B1O75533 1304 aaKnown RBP eCLIP11.59□□□□□ -0.55
PDGFRB-203ENST00000517660 WDFY3Q8IZQ1 3526 aa11.59□□□□□ -0.55
PDGFRB-203ENST00000517660 H0YCG3 227 aa11.58□□□□□ -0.56
PDGFRB-203ENST00000517660 DCNP07585 359 aaKnown RBP11.58□□□□□ -0.56
PDGFRB-203ENST00000517660 GLULP15104 373 aa11.58□□□□□ -0.56
PDGFRB-203ENST00000517660 PROZP22891 400 aa11.58□□□□□ -0.56
PDGFRB-203ENST00000517660 RAD51AP2Q09MP3 1159 aa11.58□□□□□ -0.56
PDGFRB-203ENST00000517660 ELAVL2Q12926 359 aaKnown RBP11.58□□□□□ -0.56
PDGFRB-203ENST00000517660 ZNF568Q3ZCX4 644 aa11.58□□□□□ -0.56
PDGFRB-203ENST00000517660 ARSHQ5FYA8 562 aa11.58□□□□□ -0.56
PDGFRB-203ENST00000517660 XKR4Q5GH76 650 aa11.58□□□□□ -0.56
PDGFRB-203ENST00000517660 DCLRE1AQ6PJP8 1040 aa11.58□□□□□ -0.56
PDGFRB-203ENST00000517660 MPZL3Q6UWV2 235 aa11.58□□□□□ -0.56
PDGFRB-203ENST00000517660 ALKAL1Q6UXT8 129 aa11.58□□□□□ -0.56
PDGFRB-203ENST00000517660 CYP26C1Q6V0L0 522 aa11.58□□□□□ -0.56
PDGFRB-203ENST00000517660 C15orf39Q6ZRI6 1047 aa11.58□□□□□ -0.56
PDGFRB-203ENST00000517660 PALB2Q86YC2 1186 aa11.58□□□□□ -0.56
PDGFRB-203ENST00000517660 PLCD3Q8N3E9 789 aa11.58□□□□□ -0.56
PDGFRB-203ENST00000517660 TMEM161BQ8NDZ6 487 aa11.58□□□□□ -0.56
PDGFRB-203ENST00000517660 INTS4Q96HW7 963 aaKnown RBP11.58□□□□□ -0.56
PDGFRB-203ENST00000517660 CHAMP1Q96JM3 812 aa11.58□□□□□ -0.56
PDGFRB-203ENST00000517660 B3GALT6Q96L58 329 aa11.58□□□□□ -0.56
PDGFRB-203ENST00000517660 UROC1Q96N76 676 aa11.58□□□□□ -0.56
PDGFRB-203ENST00000517660 PPP1R10Q96QC0 940 aaKnown RBP11.58□□□□□ -0.56
PDGFRB-203ENST00000517660 TTPALQ9BTX7 342 aa11.58□□□□□ -0.56
PDGFRB-203ENST00000517660 PLEKHA4Q9H4M7 779 aa11.58□□□□□ -0.56
PDGFRB-203ENST00000517660 PARD6AQ9NPB6 346 aa11.58□□□□□ -0.56
PDGFRB-203ENST00000517660 TOPORSQ9NS56 1045 aaPredicted RBP11.58□□□□□ -0.56
PDGFRB-203ENST00000517660 LARSQ9P2J5 1176 aaKnown RBP11.58□□□□□ -0.56
PDGFRB-203ENST00000517660 CACNG4Q9UBN1 327 aa11.58□□□□□ -0.56
PDGFRB-203ENST00000517660 ARID2Q68CP9 1835 aa11.58□□□□□ -0.56
PDGFRB-203ENST00000517660 ANKRD11Q6UB99 2663 aaPredicted RBP11.57□□□□□ -0.56
PDGFRB-203ENST00000517660 SETXQ7Z333 2677 aaKnown RBP11.57□□□□□ -0.56
PDGFRB-203ENST00000517660 NPHP3-ACAD11A0A0J9YXS1 232 aa11.57□□□□□ -0.56
PDGFRB-203ENST00000517660 SMIM28A0A1B0GU29 152 aa11.57□□□□□ -0.56
PDGFRB-203ENST00000517660 CCDC195A0A1B0GUA6 201 aa11.57□□□□□ -0.56
PDGFRB-203ENST00000517660 TOM1L1O75674 476 aa11.57□□□□□ -0.56
PDGFRB-203ENST00000517660 KIF4AO95239 1232 aa11.57□□□□□ -0.56
PDGFRB-203ENST00000517660 MAPTP10636 758 aaKnown RBP11.57□□□□□ -0.56
PDGFRB-203ENST00000517660 SYT1P21579 422 aa11.57□□□□□ -0.56
PDGFRB-203ENST00000517660 OSTNP61366 133 aa11.57□□□□□ -0.56
PDGFRB-203ENST00000517660 GLRA4Q5JXX5 417 aa11.57□□□□□ -0.56
PDGFRB-203ENST00000517660 RTP2Q5QGT7 225 aa11.57□□□□□ -0.56
PDGFRB-203ENST00000517660 VARS2Q5ST30 1063 aaKnown RBP11.57□□□□□ -0.56
PDGFRB-203ENST00000517660 FAM171A1Q5VUB5 890 aa11.57□□□□□ -0.56
PDGFRB-203ENST00000517660 LILRA6Q6PI73 481 aa11.57□□□□□ -0.56
PDGFRB-203ENST00000517660 ZC3H14Q6PJT7 736 aaKnown RBP11.57□□□□□ -0.56
PDGFRB-203ENST00000517660 GPBP1Q86WP2 473 aa11.57□□□□□ -0.56
PDGFRB-203ENST00000517660 CEP57Q86XR8 500 aa11.57□□□□□ -0.56
PDGFRB-203ENST00000517660 CEP120Q8N960 986 aa11.57□□□□□ -0.56
PDGFRB-203ENST00000517660 HASPINQ8TF76 798 aa11.57□□□□□ -0.56
PDGFRB-203ENST00000517660 PIK3R5Q8WYR1 880 aa11.57□□□□□ -0.56
PDGFRB-203ENST00000517660 DDX27Q96GQ7 796 aaKnown RBP11.57□□□□□ -0.56
PDGFRB-203ENST00000517660 ACAP3Q96P50 834 aa11.57□□□□□ -0.56
PDGFRB-203ENST00000517660 RTKNQ9BST9 563 aa11.57□□□□□ -0.56
PDGFRB-203ENST00000517660 RHOBTB2Q9BYZ6 727 aa11.57□□□□□ -0.56
PDGFRB-203ENST00000517660 KCNK12Q9HB15 430 aa11.57□□□□□ -0.56
PDGFRB-203ENST00000517660 MAN1C1Q9NR34 630 aa11.57□□□□□ -0.56
PDGFRB-203ENST00000517660 SLC38A7Q9NVC3 462 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms