RNA–Protein interactions for RNA: ENST00000517533.5

CTNNA1-202, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-202ENST00000517533 RHPN2P1A8MT19 583 aa6.68□□□□□ -1.34
CTNNA1-202ENST00000517533 ANP32CO43423 234 aa6.68□□□□□ -1.34
CTNNA1-202ENST00000517533 DTNBO60941 627 aa6.68□□□□□ -1.34
CTNNA1-202ENST00000517533 AMY1AP04745 511 aa6.68□□□□□ -1.34
CTNNA1-202ENST00000517533 LTA4HP09960 611 aaKnown RBP6.68□□□□□ -1.34
CTNNA1-202ENST00000517533 POLD1P28340 1107 aa6.68□□□□□ -1.34
CTNNA1-202ENST00000517533 ADAM15Q13444 863 aa6.68□□□□□ -1.34
CTNNA1-202ENST00000517533 SSPNQ14714 243 aa6.68□□□□□ -1.34
CTNNA1-202ENST00000517533 PRR16Q569H4 304 aa6.68□□□□□ -1.34
CTNNA1-202ENST00000517533 GPATCH4Q5T3I0 446 aaKnown RBP6.68□□□□□ -1.34
CTNNA1-202ENST00000517533 VPS53Q5VIR6 699 aa6.68□□□□□ -1.34
CTNNA1-202ENST00000517533 CLEC14AQ86T13 490 aa6.68□□□□□ -1.34
CTNNA1-202ENST00000517533 ANKRD18AQ8IVF6 992 aa6.68□□□□□ -1.34
CTNNA1-202ENST00000517533 RHOT1Q8IXI2 618 aa6.68□□□□□ -1.34
CTNNA1-202ENST00000517533 ZDHHC14Q8IZN3 488 aa6.68□□□□□ -1.34
CTNNA1-202ENST00000517533 KLHDC4Q8TBB5 520 aa6.68□□□□□ -1.34
CTNNA1-202ENST00000517533 SNX33Q8WV41 574 aa6.68□□□□□ -1.34
CTNNA1-202ENST00000517533 LRTOMTQ8WZ04 291 aa6.68□□□□□ -1.34
CTNNA1-202ENST00000517533 RGMAQ96B86 450 aa6.68□□□□□ -1.34
CTNNA1-202ENST00000517533 MRGPRX4Q96LA9 322 aa6.68□□□□□ -1.34
CTNNA1-202ENST00000517533 PDCD2LQ9BRP1 358 aa6.68□□□□□ -1.34
CTNNA1-202ENST00000517533 KIAA1683Q9H0B3 1180 aa6.68□□□□□ -1.34
CTNNA1-202ENST00000517533 LDAHQ9H6V9 325 aa6.68□□□□□ -1.34
CTNNA1-202ENST00000517533 PCDH18Q9HCL0 1135 aa6.68□□□□□ -1.34
CTNNA1-202ENST00000517533 RIC8AQ9NPQ8 531 aa6.68□□□□□ -1.34
CTNNA1-202ENST00000517533 TLR9Q9NR96 1032 aa6.68□□□□□ -1.34
CTNNA1-202ENST00000517533 VPS45Q9NRW7 570 aa6.68□□□□□ -1.34
CTNNA1-202ENST00000517533 ING3Q9NXR8 418 aa6.68□□□□□ -1.34
CTNNA1-202ENST00000517533 STXBP5LQ9Y2K9 1186 aa6.68□□□□□ -1.34
CTNNA1-202ENST00000517533 CFAP20Q9Y6A4 193 aaKnown RBP6.68□□□□□ -1.34
CTNNA1-202ENST00000517533 RPTORQ8N122 1335 aa6.68□□□□□ -1.34
CTNNA1-202ENST00000517533 CAPN8A6NHC0 703 aa6.67□□□□□ -1.34
CTNNA1-202ENST00000517533 DDX3XO00571 662 aaKnown RBP eCLIP6.67□□□□□ -1.34
CTNNA1-202ENST00000517533 PRAMEF4O60810 478 aa6.67□□□□□ -1.34
CTNNA1-202ENST00000517533 SEMA7AO75326 666 aa6.67□□□□□ -1.34
CTNNA1-202ENST00000517533 FTLP02792 175 aaPredicted RBP6.67□□□□□ -1.34
CTNNA1-202ENST00000517533 KRT1P04264 644 aa6.67□□□□□ -1.34
CTNNA1-202ENST00000517533 CHGBP05060 677 aa6.67□□□□□ -1.34
CTNNA1-202ENST00000517533 JUNBP17275 347 aaPredicted RBP6.67□□□□□ -1.34
CTNNA1-202ENST00000517533 SYN1P17600 705 aa6.67□□□□□ -1.34
CTNNA1-202ENST00000517533 SREBF1P36956 1147 aa6.67□□□□□ -1.34
CTNNA1-202ENST00000517533 ETV4P43268 484 aa6.67□□□□□ -1.34
CTNNA1-202ENST00000517533 CACNB3P54284 484 aa6.67□□□□□ -1.34
CTNNA1-202ENST00000517533 BLMHQ13867 455 aa6.67□□□□□ -1.34
CTNNA1-202ENST00000517533 ANO6Q4KMQ2 910 aa6.67□□□□□ -1.34
CTNNA1-202ENST00000517533 VWA3BQ502W6 1294 aa6.67□□□□□ -1.34
CTNNA1-202ENST00000517533 AGAP9Q5VTM2 703 aa6.67□□□□□ -1.34
CTNNA1-202ENST00000517533 GET4Q7L5D6 327 aaPredicted RBP6.67□□□□□ -1.34
CTNNA1-202ENST00000517533 TAS1R1Q7RTX1 841 aa6.67□□□□□ -1.34
CTNNA1-202ENST00000517533 UNC5BQ8IZJ1 945 aa6.67□□□□□ -1.34
CTNNA1-202ENST00000517533 ADGRG2Q8IZP9 1017 aa6.67□□□□□ -1.34
CTNNA1-202ENST00000517533 CELF5Q8N6W0 485 aaKnown RBP6.67□□□□□ -1.34
CTNNA1-202ENST00000517533 REPS2Q8NFH8 660 aa6.67□□□□□ -1.34
CTNNA1-202ENST00000517533 FBXO18Q8NFZ0 1043 aa6.67□□□□□ -1.34
CTNNA1-202ENST00000517533 PHKBQ93100 1093 aa6.67□□□□□ -1.34
CTNNA1-202ENST00000517533 SAMD11Q96NU1 681 aa6.67□□□□□ -1.34
CTNNA1-202ENST00000517533 NELL2Q99435 816 aa6.67□□□□□ -1.34
CTNNA1-202ENST00000517533 C7orf25Q9BPX7 421 aa6.67□□□□□ -1.34
CTNNA1-202ENST00000517533 ARMT1Q9H993 441 aa6.67□□□□□ -1.34
CTNNA1-202ENST00000517533 IFT80Q9P2H3 777 aaPredicted RBP6.67□□□□□ -1.34
CTNNA1-202ENST00000517533 STAP2Q9UGK3 403 aa6.67□□□□□ -1.34
CTNNA1-202ENST00000517533 TRPS1Q9UHF7 1281 aa6.67□□□□□ -1.34
CTNNA1-202ENST00000517533 PMF1-BGLAPU3KQ54 211 aa6.67□□□□□ -1.34
CTNNA1-202ENST00000517533 ETV2O00321 342 aaPredicted RBP6.66□□□□□ -1.34
CTNNA1-202ENST00000517533 CNOT4O95628 575 aaKnown RBP6.66□□□□□ -1.34
CTNNA1-202ENST00000517533 ZNF888P0CJ79 500 aaPredicted RBP6.66□□□□□ -1.34
CTNNA1-202ENST00000517533 ZEB1P37275 1124 aaPredicted RBP6.66□□□□□ -1.34
CTNNA1-202ENST00000517533 HK3P52790 923 aa6.66□□□□□ -1.34
CTNNA1-202ENST00000517533 MAPK10P53779 464 aa6.66□□□□□ -1.34
CTNNA1-202ENST00000517533 NKX6-1P78426 367 aaPredicted RBP6.66□□□□□ -1.34
CTNNA1-202ENST00000517533 APBA1Q02410 837 aa6.66□□□□□ -1.34
CTNNA1-202ENST00000517533 ICA1Q05084 483 aa6.66□□□□□ -1.34
CTNNA1-202ENST00000517533 NOGQ13253 232 aa6.66□□□□□ -1.34
CTNNA1-202ENST00000517533 PCOLCEQ15113 449 aa6.66□□□□□ -1.34
CTNNA1-202ENST00000517533 TBR1Q16650 682 aa6.66□□□□□ -1.34
CTNNA1-202ENST00000517533 WDR45BQ5MNZ6 344 aa6.66□□□□□ -1.34
CTNNA1-202ENST00000517533 ZKSCAN2Q63HK3 967 aa6.66□□□□□ -1.34
CTNNA1-202ENST00000517533 GGT6Q6P531 493 aa6.66□□□□□ -1.34
CTNNA1-202ENST00000517533 APOA5Q6Q788 366 aa6.66□□□□□ -1.34
CTNNA1-202ENST00000517533 MIGA2Q7L4E1 593 aa6.66□□□□□ -1.34
CTNNA1-202ENST00000517533 ARL8AQ96BM9 186 aa6.66□□□□□ -1.34
CTNNA1-202ENST00000517533 YTHDC1Q96MU7 727 aaKnown RBP6.66□□□□□ -1.34
CTNNA1-202ENST00000517533 WRNIP1Q96S55 665 aa6.66□□□□□ -1.34
CTNNA1-202ENST00000517533 VRK1Q99986 396 aaPredicted RBP6.66□□□□□ -1.34
CTNNA1-202ENST00000517533 SLC26A6Q9BXS9 759 aa6.66□□□□□ -1.34
CTNNA1-202ENST00000517533 C22orf23Q9BZE7 217 aa6.66□□□□□ -1.34
CTNNA1-202ENST00000517533 KATNBL1Q9H079 304 aa6.66□□□□□ -1.34
CTNNA1-202ENST00000517533 GGA3Q9NZ52 723 aa6.66□□□□□ -1.34
CTNNA1-202ENST00000517533 GRHPRQ9UBQ7 328 aa6.66□□□□□ -1.34
CTNNA1-202ENST00000517533 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.66□□□□□ -1.34
CTNNA1-202ENST00000517533 FBXO10Q9UK96 956 aa6.66□□□□□ -1.34
CTNNA1-202ENST00000517533 TMX2Q9Y320 296 aa6.66□□□□□ -1.34
CTNNA1-202ENST00000517533 AFG3L2Q9Y4W6 797 aa6.66□□□□□ -1.34
CTNNA1-202ENST00000517533 PCDHA3Q9Y5H8 950 aa6.66□□□□□ -1.34
CTNNA1-202ENST00000517533 A0A088AWK7 358 aa6.65□□□□□ -1.34
CTNNA1-202ENST00000517533 A0A1B0GTL3 188 aa6.65□□□□□ -1.34
CTNNA1-202ENST00000517533 A0A1W2PRQ8 180 aa6.65□□□□□ -1.34
CTNNA1-202ENST00000517533 FAM171A2A8MVW0 826 aa6.65□□□□□ -1.34
CTNNA1-202ENST00000517533 K7ENM7 598 aa6.65□□□□□ -1.34
CTNNA1-202ENST00000517533 EIF3FO00303 357 aaPredicted RBP6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms