RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 FANCLQ9NW38 375 aa10.74□□□□□ -0.69
CLN8-202ENST00000517514 LRFN2Q9ULH4 789 aa10.74□□□□□ -0.69
CLN8-202ENST00000517514 COLQQ9Y215 455 aaPredicted RBP10.74□□□□□ -0.69
CLN8-202ENST00000517514 YBX2Q9Y2T7 364 aaKnown RBP10.74□□□□□ -0.69
CLN8-202ENST00000517514 NFE2L3Q9Y4A8 694 aa10.74□□□□□ -0.69
CLN8-202ENST00000517514 TBKBP1A7MCY6 615 aa10.73□□□□□ -0.69
CLN8-202ENST00000517514 F8W810 466 aa10.73□□□□□ -0.69
CLN8-202ENST00000517514 IKBKBO14920 756 aa10.73□□□□□ -0.69
CLN8-202ENST00000517514 SLC16A3O15427 465 aaKnown RBP10.73□□□□□ -0.69
CLN8-202ENST00000517514 POMCP01189 267 aa10.73□□□□□ -0.69
CLN8-202ENST00000517514 TRIM49P0CI25 452 aa10.73□□□□□ -0.69
CLN8-202ENST00000517514 TRIM49CP0CI26 452 aa10.73□□□□□ -0.69
CLN8-202ENST00000517514 PSMC2P35998 433 aaKnown RBP10.73□□□□□ -0.69
CLN8-202ENST00000517514 MYL5Q02045 173 aa10.73□□□□□ -0.69
CLN8-202ENST00000517514 PPP3CAQ08209 521 aa10.73□□□□□ -0.69
CLN8-202ENST00000517514 KYAT1Q16773 422 aa10.73□□□□□ -0.69
CLN8-202ENST00000517514 PAN2Q504Q3 1202 aaKnown RBP10.73□□□□□ -0.69
CLN8-202ENST00000517514 HSP90AA4PQ58FG1 418 aa10.73□□□□□ -0.69
CLN8-202ENST00000517514 GLB1LQ6UWU2 654 aa10.73□□□□□ -0.69
CLN8-202ENST00000517514 LUZP1Q86V48 1076 aa10.73□□□□□ -0.69
CLN8-202ENST00000517514 TRIM59Q8IWR1 403 aa10.73□□□□□ -0.69
CLN8-202ENST00000517514 TMC2Q8TDI7 906 aa10.73□□□□□ -0.69
CLN8-202ENST00000517514 CCDC127Q96BQ5 260 aa10.73□□□□□ -0.69
CLN8-202ENST00000517514 CNOT6LQ96LI5 555 aaKnown RBP10.73□□□□□ -0.69
CLN8-202ENST00000517514 PAAF1Q9BRP4 392 aa10.73□□□□□ -0.69
CLN8-202ENST00000517514 TSPY26PQ9H489 355 aa10.73□□□□□ -0.69
CLN8-202ENST00000517514 THAP9Q9H5L6 903 aa10.73□□□□□ -0.69
CLN8-202ENST00000517514 ASB7Q9H672 318 aa10.73□□□□□ -0.69
CLN8-202ENST00000517514 NRDE2Q9H7Z3 1164 aa10.73□□□□□ -0.69
CLN8-202ENST00000517514 GOLGA2P5Q9HBQ8 144 aa10.73□□□□□ -0.69
CLN8-202ENST00000517514 UBN1Q9NPG3 1134 aa10.73□□□□□ -0.69
CLN8-202ENST00000517514 DNAJB4Q9UDY4 337 aa10.73□□□□□ -0.69
CLN8-202ENST00000517514 TUBGCP4Q9UGJ1 667 aa10.73□□□□□ -0.69
CLN8-202ENST00000517514 INPP5FQ9Y2H2 1132 aa10.73□□□□□ -0.69
CLN8-202ENST00000517514 MRPL42Q9Y6G3 142 aaKnown RBP10.73□□□□□ -0.69
CLN8-202ENST00000517514 TSC2P49815 1807 aa10.72□□□□□ -0.69
CLN8-202ENST00000517514 VWA8A3KMH1 1905 aa10.72□□□□□ -0.69
CLN8-202ENST00000517514 PPEF2O14830 753 aa10.72□□□□□ -0.69
CLN8-202ENST00000517514 LRRN2O75325 713 aa10.72□□□□□ -0.69
CLN8-202ENST00000517514 IL18RAPO95256 599 aa10.72□□□□□ -0.69
CLN8-202ENST00000517514 ATP1A3P13637 1013 aa10.72□□□□□ -0.69
CLN8-202ENST00000517514 YARSP54577 528 aaKnown RBP10.72□□□□□ -0.69
CLN8-202ENST00000517514 PPP2R3AQ06190 1150 aa10.72□□□□□ -0.69
CLN8-202ENST00000517514 ENPEPQ07075 957 aa10.72□□□□□ -0.69
CLN8-202ENST00000517514 BFSP1Q12934 665 aa10.72□□□□□ -0.69
CLN8-202ENST00000517514 GRIK3Q13003 919 aa10.72□□□□□ -0.69
CLN8-202ENST00000517514 C15orf39Q6ZRI6 1047 aa10.72□□□□□ -0.69
CLN8-202ENST00000517514 FRMD5Q7Z6J6 570 aa10.72□□□□□ -0.69
CLN8-202ENST00000517514 COLGALT2Q8IYK4 626 aa10.72□□□□□ -0.69
CLN8-202ENST00000517514 CMTR2Q8IYT2 770 aaKnown RBP10.72□□□□□ -0.69
CLN8-202ENST00000517514 HACE1Q8IYU2 909 aa10.72□□□□□ -0.69
CLN8-202ENST00000517514 BCL7CQ8WUZ0 217 aaPredicted RBP10.72□□□□□ -0.69
CLN8-202ENST00000517514 SLC35C1Q96A29 364 aa10.72□□□□□ -0.69
CLN8-202ENST00000517514 FAM212AQ96EL1 285 aa10.72□□□□□ -0.69
CLN8-202ENST00000517514 RAD9AQ99638 391 aa10.72□□□□□ -0.69
CLN8-202ENST00000517514 CGRRF1Q99675 332 aa10.72□□□□□ -0.69
CLN8-202ENST00000517514 PBX4Q9BYU1 374 aa10.72□□□□□ -0.69
CLN8-202ENST00000517514 MTIF3Q9H2K0 278 aaKnown RBP10.72□□□□□ -0.69
CLN8-202ENST00000517514 INTS13Q9NVM9 706 aa10.72□□□□□ -0.69
CLN8-202ENST00000517514 SIX4Q9UIU6 781 aa10.72□□□□□ -0.69
CLN8-202ENST00000517514 FRMD4BQ9Y2L6 1034 aa10.72□□□□□ -0.69
CLN8-202ENST00000517514 DERAQ9Y315 318 aa10.72□□□□□ -0.69
CLN8-202ENST00000517514 C2CD2Q9Y426 696 aa10.72□□□□□ -0.69
CLN8-202ENST00000517514 ANO9A1A5B4 782 aa10.71□□□□□ -0.69
CLN8-202ENST00000517514 LINC01553A4QN01 128 aa10.71□□□□□ -0.69
CLN8-202ENST00000517514 HOXA2O43364 376 aa10.71□□□□□ -0.69
CLN8-202ENST00000517514 VNN1O95497 513 aa10.71□□□□□ -0.69
CLN8-202ENST00000517514 EFEMP2O95967 443 aa10.71□□□□□ -0.69
CLN8-202ENST00000517514 C4BPAP04003 597 aaKnown RBP10.71□□□□□ -0.69
CLN8-202ENST00000517514 THP07101 528 aa10.71□□□□□ -0.69
CLN8-202ENST00000517514 EPB41P11171 864 aaKnown RBP10.71□□□□□ -0.69
CLN8-202ENST00000517514 PBX3P40426 434 aa10.71□□□□□ -0.69
CLN8-202ENST00000517514 SLC11A1P49279 550 aa10.71□□□□□ -0.69
CLN8-202ENST00000517514 VAMP7P51809 220 aa10.71□□□□□ -0.69
CLN8-202ENST00000517514 TMEM132DQ14C87 1099 aa10.71□□□□□ -0.69
CLN8-202ENST00000517514 MIIPQ5JXC2 388 aa10.71□□□□□ -0.69
CLN8-202ENST00000517514 PRPF38BQ5VTL8 546 aaKnown RBP10.71□□□□□ -0.69
CLN8-202ENST00000517514 INTS8Q75QN2 995 aaKnown RBP10.71□□□□□ -0.69
CLN8-202ENST00000517514 TMEM173Q86WV6 379 aaPredicted RBP10.71□□□□□ -0.69
CLN8-202ENST00000517514 CD302Q8IX05 232 aa10.71□□□□□ -0.69
CLN8-202ENST00000517514 C1orf127Q8N9H9 656 aa10.71□□□□□ -0.69
CLN8-202ENST00000517514 C3orf58Q8NDZ4 430 aa10.71□□□□□ -0.69
CLN8-202ENST00000517514 FAM200AQ8TCP9 573 aa10.71□□□□□ -0.69
CLN8-202ENST00000517514 RABGGTAQ92696 567 aa10.71□□□□□ -0.69
CLN8-202ENST00000517514 CLP1Q92989 425 aaKnown RBP10.71□□□□□ -0.69
CLN8-202ENST00000517514 KIF12Q96FN5 646 aa10.71□□□□□ -0.69
CLN8-202ENST00000517514 MTMR12Q9C0I1 747 aa10.71□□□□□ -0.69
CLN8-202ENST00000517514 RBSNQ9H1K0 784 aa10.71□□□□□ -0.69
CLN8-202ENST00000517514 ARMCX3Q9UH62 379 aaPredicted RBP10.71□□□□□ -0.69
CLN8-202ENST00000517514 INSL6Q9Y581 213 aa10.71□□□□□ -0.69
CLN8-202ENST00000517514 TRIOBPQ9H2D6 2365 aa10.7□□□□□ -0.7
CLN8-202ENST00000517514 COL4A4P53420 1690 aaPredicted RBP10.7□□□□□ -0.7
CLN8-202ENST00000517514 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.7□□□□□ -0.7
CLN8-202ENST00000517514 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.7□□□□□ -0.7
CLN8-202ENST00000517514 CASTOR2A6NHX0 329 aa10.7□□□□□ -0.7
CLN8-202ENST00000517514 KCNJ18B7U540 433 aa10.7□□□□□ -0.7
CLN8-202ENST00000517514 AP5Z1O43299 807 aa10.7□□□□□ -0.7
CLN8-202ENST00000517514 TLL1O43897 1013 aa10.7□□□□□ -0.7
CLN8-202ENST00000517514 CST3P01034 146 aaPredicted RBP10.7□□□□□ -0.7
CLN8-202ENST00000517514 ITGB1P05556 798 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms