RNA–Protein interactions for RNA: ENST00000517494.1

CSGALNACT1-204, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 3

Gene CSGALNACT1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-204ENST00000517494 BRCC3P46736 316 aa16.76■□□□□ 0.27
CSGALNACT1-204ENST00000517494 PPP2R5AQ15172 486 aa16.76■□□□□ 0.27
CSGALNACT1-204ENST00000517494 UVSSAQ2YD98 709 aa16.76■□□□□ 0.27
CSGALNACT1-204ENST00000517494 ZBTB41Q5SVQ8 909 aa16.76■□□□□ 0.27
CSGALNACT1-204ENST00000517494 ATF7IP2Q5U623 682 aa16.76■□□□□ 0.27
CSGALNACT1-204ENST00000517494 RSPO2Q6UXX9 243 aaPredicted RBP16.76■□□□□ 0.27
CSGALNACT1-204ENST00000517494 SUMF1Q8NBK3 374 aa16.76■□□□□ 0.27
CSGALNACT1-204ENST00000517494 IFT74Q96LB3 600 aa16.76■□□□□ 0.27
CSGALNACT1-204ENST00000517494 DDX23Q9BUQ8 820 aaKnown RBP16.76■□□□□ 0.27
CSGALNACT1-204ENST00000517494 KCNH3Q9ULD8 1083 aa16.76■□□□□ 0.27
CSGALNACT1-204ENST00000517494 MTCL1Q9Y4B5 1905 aaKnown RBP16.75■□□□□ 0.27
CSGALNACT1-204ENST00000517494 PRRG1O14668 218 aa16.75■□□□□ 0.27
CSGALNACT1-204ENST00000517494 SPTLC1O15269 473 aa16.75■□□□□ 0.27
CSGALNACT1-204ENST00000517494 TRAPPC3O43617 180 aa16.75■□□□□ 0.27
CSGALNACT1-204ENST00000517494 LRG1P02750 347 aa16.75■□□□□ 0.27
CSGALNACT1-204ENST00000517494 RHOP08100 348 aa16.75■□□□□ 0.27
CSGALNACT1-204ENST00000517494 ELF1P32519 619 aa16.75■□□□□ 0.27
CSGALNACT1-204ENST00000517494 OSTNP61366 133 aa16.75■□□□□ 0.27
CSGALNACT1-204ENST00000517494 SAFBQ15424 915 aaKnown RBP eCLIP16.75■□□□□ 0.27
CSGALNACT1-204ENST00000517494 ZNF174Q15697 407 aa16.75■□□□□ 0.27
CSGALNACT1-204ENST00000517494 RSPO4Q2I0M5 234 aaPredicted RBP16.75■□□□□ 0.27
CSGALNACT1-204ENST00000517494 SLC5A9Q2M3M2 681 aa16.75■□□□□ 0.27
CSGALNACT1-204ENST00000517494 TSSK4Q6SA08 328 aa16.75■□□□□ 0.27
CSGALNACT1-204ENST00000517494 ANKS3Q6ZW76 656 aa16.75■□□□□ 0.27
CSGALNACT1-204ENST00000517494 APBB1IPQ7Z5R6 666 aaPredicted RBP16.75■□□□□ 0.27
CSGALNACT1-204ENST00000517494 DDX27Q96GQ7 796 aaKnown RBP16.75■□□□□ 0.27
CSGALNACT1-204ENST00000517494 POLR3CQ9BUI4 534 aaPredicted RBP16.75■□□□□ 0.27
CSGALNACT1-204ENST00000517494 HEBP1Q9NRV9 189 aa16.75■□□□□ 0.27
CSGALNACT1-204ENST00000517494 FBXO4Q9UKT5 387 aa16.75■□□□□ 0.27
CSGALNACT1-204ENST00000517494 TMEM189-UBE2V1I3L0A0 370 aa16.74■□□□□ 0.27
CSGALNACT1-204ENST00000517494 POU2F2P09086 479 aa16.74■□□□□ 0.27
CSGALNACT1-204ENST00000517494 OR52Z1P0C646 297 aa16.74■□□□□ 0.27
CSGALNACT1-204ENST00000517494 CEBPBP17676 345 aa16.74■□□□□ 0.27
CSGALNACT1-204ENST00000517494 TARSP26639 723 aaKnown RBP16.74■□□□□ 0.27
CSGALNACT1-204ENST00000517494 EFNA5P52803 228 aa16.74■□□□□ 0.27
CSGALNACT1-204ENST00000517494 YARSP54577 528 aaKnown RBP16.74■□□□□ 0.27
CSGALNACT1-204ENST00000517494 GRM2Q14416 872 aa16.74■□□□□ 0.27
CSGALNACT1-204ENST00000517494 ZNF528Q3MIS6 628 aa16.74■□□□□ 0.27
CSGALNACT1-204ENST00000517494 VARS2Q5ST30 1063 aaKnown RBP16.74■□□□□ 0.27
CSGALNACT1-204ENST00000517494 NT5DC1Q5TFE4 455 aa16.74■□□□□ 0.27
CSGALNACT1-204ENST00000517494 C3orf58Q8NDZ4 430 aa16.74■□□□□ 0.27
CSGALNACT1-204ENST00000517494 UROC1Q96N76 676 aa16.74■□□□□ 0.27
CSGALNACT1-204ENST00000517494 PPP1R10Q96QC0 940 aaKnown RBP16.74■□□□□ 0.27
CSGALNACT1-204ENST00000517494 CORO1BQ9BR76 489 aa16.74■□□□□ 0.27
CSGALNACT1-204ENST00000517494 PLA2G2FQ9BZM2 168 aa16.74■□□□□ 0.27
CSGALNACT1-204ENST00000517494 BACE2Q9Y5Z0 518 aa16.74■□□□□ 0.27
CSGALNACT1-204ENST00000517494 CACNA1AO00555 2505 aa16.74■□□□□ 0.27
CSGALNACT1-204ENST00000517494 MYH15Q9Y2K3 1946 aa16.74■□□□□ 0.27
CSGALNACT1-204ENST00000517494 CCDC169A6NNP5 214 aa16.73■□□□□ 0.27
CSGALNACT1-204ENST00000517494 NCAM2O15394 837 aa16.73■□□□□ 0.27
CSGALNACT1-204ENST00000517494 ECI2O75521 394 aa16.73■□□□□ 0.27
CSGALNACT1-204ENST00000517494 RPA1P27694 616 aa16.73■□□□□ 0.27
CSGALNACT1-204ENST00000517494 CCT6AP40227 531 aaKnown RBP16.73■□□□□ 0.27
CSGALNACT1-204ENST00000517494 RBM25P49756 843 aaKnown RBP16.73■□□□□ 0.27
CSGALNACT1-204ENST00000517494 ROR1Q01973 937 aa16.73■□□□□ 0.27
CSGALNACT1-204ENST00000517494 UPP1Q16831 310 aa16.73■□□□□ 0.27
CSGALNACT1-204ENST00000517494 ZNF568Q3ZCX4 644 aa16.73■□□□□ 0.27
CSGALNACT1-204ENST00000517494 HAUS3Q68CZ6 603 aa16.73■□□□□ 0.27
CSGALNACT1-204ENST00000517494 ZNF852Q6ZMS4 543 aa16.73■□□□□ 0.27
CSGALNACT1-204ENST00000517494 CEP120Q8N960 986 aa16.73■□□□□ 0.27
CSGALNACT1-204ENST00000517494 SECISBP2LQ93073 1101 aaKnown RBP16.73■□□□□ 0.27
CSGALNACT1-204ENST00000517494 CCDC94Q9BW85 323 aaPredicted RBP16.73■□□□□ 0.27
CSGALNACT1-204ENST00000517494 OSBPL6Q9BZF3 934 aa16.73■□□□□ 0.27
CSGALNACT1-204ENST00000517494 BHMT2Q9H2M3 363 aa16.73■□□□□ 0.27
CSGALNACT1-204ENST00000517494 CYP4F11Q9HBI6 524 aa16.73■□□□□ 0.27
CSGALNACT1-204ENST00000517494 GDE1Q9NZC3 331 aa16.73■□□□□ 0.27
CSGALNACT1-204ENST00000517494 NDRG2Q9UN36 371 aaKnown RBP16.73■□□□□ 0.27
CSGALNACT1-204ENST00000517494 SMG5Q9UPR3 1016 aaKnown RBP16.73■□□□□ 0.27
CSGALNACT1-204ENST00000517494 MRPS17Q9Y2R5 130 aaKnown RBP16.73■□□□□ 0.27
CSGALNACT1-204ENST00000517494 PCDHGA2Q9Y5H1 932 aa16.73■□□□□ 0.27
CSGALNACT1-204ENST00000517494 DOCK6Q96HP0 2047 aa16.72■□□□□ 0.27
CSGALNACT1-204ENST00000517494 SMIM28A0A1B0GU29 152 aa16.72■□□□□ 0.27
CSGALNACT1-204ENST00000517494 HARSP12081 509 aaKnown RBP16.72■□□□□ 0.27
CSGALNACT1-204ENST00000517494 PTPN2P17706 415 aa16.72■□□□□ 0.27
CSGALNACT1-204ENST00000517494 MAGEA9P43362 315 aa16.72■□□□□ 0.27
CSGALNACT1-204ENST00000517494 ANAPC15P60006 121 aa16.72■□□□□ 0.27
CSGALNACT1-204ENST00000517494 SOX4Q06945 474 aaPredicted RBP16.72■□□□□ 0.27
CSGALNACT1-204ENST00000517494 TANGO2Q6ICL3 276 aa16.72■□□□□ 0.27
CSGALNACT1-204ENST00000517494 CD300LGQ6UXG3 332 aa16.72■□□□□ 0.27
CSGALNACT1-204ENST00000517494 KIFAP3Q92845 792 aa16.72■□□□□ 0.27
CSGALNACT1-204ENST00000517494 BRD9Q9H8M2 597 aa16.72■□□□□ 0.27
CSGALNACT1-204ENST00000517494 TOPORSQ9NS56 1045 aaPredicted RBP16.72■□□□□ 0.27
CSGALNACT1-204ENST00000517494 ZSCAN32Q9NX65 697 aa16.72■□□□□ 0.27
CSGALNACT1-204ENST00000517494 NUB1Q9Y5A7 615 aa16.72■□□□□ 0.27
CSGALNACT1-204ENST00000517494 GPR179Q6PRD1 2367 aa16.72■□□□□ 0.27
CSGALNACT1-204ENST00000517494 OTOGLQ3ZCN5 2332 aa16.71■□□□□ 0.27
CSGALNACT1-204ENST00000517494 DNAH14Q0VDD8 3507 aa16.71■□□□□ 0.27
CSGALNACT1-204ENST00000517494 WDR27A2RRH5 827 aa16.71■□□□□ 0.27
CSGALNACT1-204ENST00000517494 K7ERI5 159 aa16.71■□□□□ 0.27
CSGALNACT1-204ENST00000517494 PODXLO00592 558 aa16.71■□□□□ 0.27
CSGALNACT1-204ENST00000517494 NEK4P51957 841 aa16.71■□□□□ 0.27
CSGALNACT1-204ENST00000517494 GNL2Q13823 731 aaKnown RBP16.71■□□□□ 0.27
CSGALNACT1-204ENST00000517494 PDZD4Q76G19 769 aaPredicted RBP16.71■□□□□ 0.27
CSGALNACT1-204ENST00000517494 RTL10Q7L3V2 364 aa16.71■□□□□ 0.27
CSGALNACT1-204ENST00000517494 TCEAL4Q96EI5 215 aa16.71■□□□□ 0.27
CSGALNACT1-204ENST00000517494 NELL2Q99435 816 aa16.71■□□□□ 0.27
CSGALNACT1-204ENST00000517494 CDT1Q9H211 546 aa16.71■□□□□ 0.27
CSGALNACT1-204ENST00000517494 SLC38A7Q9NVC3 462 aa16.71■□□□□ 0.27
CSGALNACT1-204ENST00000517494 DLL3Q9NYJ7 618 aa16.71■□□□□ 0.27
CSGALNACT1-204ENST00000517494 USP18Q9UMW8 372 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms