RNA–Protein interactions for RNA: ENST00000517138.1

SCARNA1-201, small Cajal body-specific RNA 1, humanhuman

BASIC

Gene SCARNA1, Length 166 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA1-201ENST00000517138 UNC119BA6NIH7 251 aa6.98□□□□□ -1.29
SCARNA1-201ENST00000517138 ALG1L2C9J202 215 aa6.98□□□□□ -1.29
SCARNA1-201ENST00000517138 LAG3P18627 525 aa6.98□□□□□ -1.29
SCARNA1-201ENST00000517138 KIF23Q02241 960 aaPredicted RBP6.98□□□□□ -1.29
SCARNA1-201ENST00000517138 UBXN2BQ14CS0 331 aa6.98□□□□□ -1.29
SCARNA1-201ENST00000517138 TIGD2Q4W5G0 525 aa6.98□□□□□ -1.29
SCARNA1-201ENST00000517138 BRDTQ58F21 947 aaPredicted RBP6.98□□□□□ -1.29
SCARNA1-201ENST00000517138 TSHZ3Q63HK5 1081 aa6.98□□□□□ -1.29
SCARNA1-201ENST00000517138 SEM1Q6ZVN7 128 aa6.98□□□□□ -1.29
SCARNA1-201ENST00000517138 ULK2Q8IYT8 1036 aa6.98□□□□□ -1.29
SCARNA1-201ENST00000517138 FAM177A1Q8N128 213 aaPredicted RBP6.98□□□□□ -1.29
SCARNA1-201ENST00000517138 AMER2Q8N7J2 671 aa6.98□□□□□ -1.29
SCARNA1-201ENST00000517138 OR56A1Q8NGH5 318 aa6.98□□□□□ -1.29
SCARNA1-201ENST00000517138 KAT5Q92993 513 aa6.98□□□□□ -1.29
SCARNA1-201ENST00000517138 CHFRQ96EP1 664 aa6.98□□□□□ -1.29
SCARNA1-201ENST00000517138 MYEOVQ96EZ4 313 aa6.98□□□□□ -1.29
SCARNA1-201ENST00000517138 KLHL11Q9NVR0 708 aa6.98□□□□□ -1.29
SCARNA1-201ENST00000517138 AATKQ6ZMQ8 1374 aa6.97□□□□□ -1.29
SCARNA1-201ENST00000517138 CCDC154A6NI56 674 aa6.97□□□□□ -1.29
SCARNA1-201ENST00000517138 TMEM200CA6NKL6 621 aa6.97□□□□□ -1.29
SCARNA1-201ENST00000517138 RNASET2O00584 256 aaKnown RBP6.97□□□□□ -1.29
SCARNA1-201ENST00000517138 ZRANB2O95218 330 aaKnown RBP eCLIP6.97□□□□□ -1.29
SCARNA1-201ENST00000517138 ABHD16AO95870 558 aa6.97□□□□□ -1.29
SCARNA1-201ENST00000517138 SBK3P0C264 359 aa6.97□□□□□ -1.29
SCARNA1-201ENST00000517138 SLC6A4P31645 630 aa6.97□□□□□ -1.29
SCARNA1-201ENST00000517138 PCSK4Q6UW60 755 aa6.97□□□□□ -1.29
SCARNA1-201ENST00000517138 PNMA8AQ86V59 439 aaPredicted RBP6.97□□□□□ -1.29
SCARNA1-201ENST00000517138 SYNE4Q8N205 404 aa6.97□□□□□ -1.29
SCARNA1-201ENST00000517138 CPEB3Q8NE35 698 aaKnown RBP6.97□□□□□ -1.29
SCARNA1-201ENST00000517138 SSH1Q8WYL5 1049 aa6.97□□□□□ -1.29
SCARNA1-201ENST00000517138 COA7Q96BR5 231 aa6.97□□□□□ -1.29
SCARNA1-201ENST00000517138 LOC105371045A0A1W2PR82 267 aa6.96□□□□□ -1.3
SCARNA1-201ENST00000517138 ANKRD62A6NC57 917 aa6.96□□□□□ -1.3
SCARNA1-201ENST00000517138 POMCP01189 267 aa6.96□□□□□ -1.3
SCARNA1-201ENST00000517138 DPTQ07507 201 aa6.96□□□□□ -1.3
SCARNA1-201ENST00000517138 GJC2Q5T442 439 aaPredicted RBP6.96□□□□□ -1.3
SCARNA1-201ENST00000517138 KCNV1Q6PIU1 500 aa6.96□□□□□ -1.3
SCARNA1-201ENST00000517138 PLXDC1Q8IUK5 500 aa6.96□□□□□ -1.3
SCARNA1-201ENST00000517138 RHOT2Q8IXI1 618 aa6.96□□□□□ -1.3
SCARNA1-201ENST00000517138 CYFIP2Q96F07 1278 aa6.96□□□□□ -1.3
SCARNA1-201ENST00000517138 TMX3Q96JJ7 454 aa6.96□□□□□ -1.3
SCARNA1-201ENST00000517138 DMRTA2Q96SC8 542 aa6.96□□□□□ -1.3
SCARNA1-201ENST00000517138 TTPALQ9BTX7 342 aa6.96□□□□□ -1.3
SCARNA1-201ENST00000517138 MANSC1Q9H8J5 431 aa6.96□□□□□ -1.3
SCARNA1-201ENST00000517138 PCDHB1Q9Y5F3 818 aa6.96□□□□□ -1.3
SCARNA1-201ENST00000517138 COL4A3Q01955 1670 aa6.96□□□□□ -1.3
SCARNA1-201ENST00000517138 MARCH11A6NNE9 402 aa6.95□□□□□ -1.3
SCARNA1-201ENST00000517138 DIRC3C9JPN6 131 aa6.95□□□□□ -1.3
SCARNA1-201ENST00000517138 ZNF280AP59817 542 aaPredicted RBP6.95□□□□□ -1.3
SCARNA1-201ENST00000517138 TGFB2P61812 414 aa6.95□□□□□ -1.3
SCARNA1-201ENST00000517138 FSTL1Q12841 308 aa6.95□□□□□ -1.3
SCARNA1-201ENST00000517138 TP53BP2Q13625 1128 aa6.95□□□□□ -1.3
SCARNA1-201ENST00000517138 DRC7Q8IY82 874 aa6.95□□□□□ -1.3
SCARNA1-201ENST00000517138 IFI44Q8TCB0 444 aa6.95□□□□□ -1.3
SCARNA1-201ENST00000517138 WDR11Q9BZH6 1224 aa6.95□□□□□ -1.3
SCARNA1-201ENST00000517138 GSTO2Q9H4Y5 243 aa6.95□□□□□ -1.3
SCARNA1-201ENST00000517138 HOMER2Q9NSB8 354 aa6.95□□□□□ -1.3
SCARNA1-201ENST00000517138 USP25Q9UHP3 1055 aa6.95□□□□□ -1.3
SCARNA1-201ENST00000517138 GRID2IPA4D2P6 1211 aa6.94□□□□□ -1.3
SCARNA1-201ENST00000517138 KIAA0391O15091 583 aaKnown RBP6.94□□□□□ -1.3
SCARNA1-201ENST00000517138 NOMO3P69849 1222 aa6.94□□□□□ -1.3
SCARNA1-201ENST00000517138 KRT85P78386 507 aa6.94□□□□□ -1.3
SCARNA1-201ENST00000517138 OCA2Q04671 838 aa6.94□□□□□ -1.3
SCARNA1-201ENST00000517138 RESTQ13127 1097 aa6.94□□□□□ -1.3
SCARNA1-201ENST00000517138 UAP1L1Q3KQV9 507 aa6.94□□□□□ -1.3
SCARNA1-201ENST00000517138 NOMO2Q5JPE7 1267 aa6.94□□□□□ -1.3
SCARNA1-201ENST00000517138 LY6G5CQ5SRR4 150 aa6.94□□□□□ -1.3
SCARNA1-201ENST00000517138 EFCAB2Q5VUJ9 269 aa6.94□□□□□ -1.3
SCARNA1-201ENST00000517138 B3GNTL1Q67FW5 361 aaPredicted RBP6.94□□□□□ -1.3
SCARNA1-201ENST00000517138 AGAP2Q99490 1192 aa6.94□□□□□ -1.3
SCARNA1-201ENST00000517138 TDP1Q9NUW8 608 aa6.94□□□□□ -1.3
SCARNA1-201ENST00000517138 ATP11BQ9Y2G3 1177 aa6.94□□□□□ -1.3
SCARNA1-201ENST00000517138 MRFAP1Q9Y605 127 aa6.94□□□□□ -1.3
SCARNA1-201ENST00000517138 FPGT-TNNI3KV9GXZ4 949 aa6.94□□□□□ -1.3
SCARNA1-201ENST00000517138 GAGE12BA1L429 117 aa6.93□□□□□ -1.3
SCARNA1-201ENST00000517138 CDHR4A6H8M9 788 aa6.93□□□□□ -1.3
SCARNA1-201ENST00000517138 GAGE12HA6NDE8 117 aa6.93□□□□□ -1.3
SCARNA1-201ENST00000517138 FOXN1O15353 648 aa6.93□□□□□ -1.3
SCARNA1-201ENST00000517138 SPDEFO95238 335 aa6.93□□□□□ -1.3
SCARNA1-201ENST00000517138 CFIP05156 583 aa6.93□□□□□ -1.3
SCARNA1-201ENST00000517138 ZEB1P37275 1124 aaPredicted RBP6.93□□□□□ -1.3
SCARNA1-201ENST00000517138 SLC16A1P53985 500 aa6.93□□□□□ -1.3
SCARNA1-201ENST00000517138 CTXN1P60606 82 aa6.93□□□□□ -1.3
SCARNA1-201ENST00000517138 LAIR1Q6GTX8 287 aa6.93□□□□□ -1.3
SCARNA1-201ENST00000517138 MIGA2Q7L4E1 593 aa6.93□□□□□ -1.3
SCARNA1-201ENST00000517138 MAPKAPK5Q8IW41 473 aa6.93□□□□□ -1.3
SCARNA1-201ENST00000517138 GPR150Q8NGU9 434 aa6.93□□□□□ -1.3
SCARNA1-201ENST00000517138 ASB10Q8WXI3 467 aa6.93□□□□□ -1.3
SCARNA1-201ENST00000517138 HDAC10Q969S8 669 aa6.93□□□□□ -1.3
SCARNA1-201ENST00000517138 MRGPRX4Q96LA9 322 aa6.93□□□□□ -1.3
SCARNA1-201ENST00000517138 CEP89Q96ST8 783 aa6.93□□□□□ -1.3
SCARNA1-201ENST00000517138 SLC13A1Q9BZW2 595 aa6.93□□□□□ -1.3
SCARNA1-201ENST00000517138 SERHL2Q9H4I8 314 aa6.93□□□□□ -1.3
SCARNA1-201ENST00000517138 FAM30AQ9NZY2 134 aa6.93□□□□□ -1.3
SCARNA1-201ENST00000517138 SAP30BPQ9UHR5 308 aaKnown RBP6.93□□□□□ -1.3
SCARNA1-201ENST00000517138 A0A087X1B8 175 aa6.92□□□□□ -1.3
SCARNA1-201ENST00000517138 A0A1B0GTW7 788 aa6.92□□□□□ -1.3
SCARNA1-201ENST00000517138 FGFR4P22455 802 aa6.92□□□□□ -1.3
SCARNA1-201ENST00000517138 GCSHP23434 173 aa6.92□□□□□ -1.3
SCARNA1-201ENST00000517138 DDX6P26196 483 aaKnown RBP eCLIP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms