RNA–Protein interactions for RNA: ENST00000517097.1

SCARNA3-201, small Cajal body-specific RNA 3, humanhuman

BASIC

Gene SCARNA3, Length 143 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA3-201ENST00000517097 PPP1R3BQ86XI6 285 aa2.95□□□□□ -1.94
SCARNA3-201ENST00000517097 SIAH1Q8IUQ4 282 aa2.95□□□□□ -1.94
SCARNA3-201ENST00000517097 CREBRFQ8IUR6 639 aa2.95□□□□□ -1.94
SCARNA3-201ENST00000517097 HERC6Q8IVU3 1022 aa2.95□□□□□ -1.94
SCARNA3-201ENST00000517097 GLB1L2Q8IW92 636 aa2.95□□□□□ -1.94
SCARNA3-201ENST00000517097 ADGRG2Q8IZP9 1017 aa2.95□□□□□ -1.94
SCARNA3-201ENST00000517097 ANKRD52Q8NB46 1076 aa2.95□□□□□ -1.94
SCARNA3-201ENST00000517097 ARRDC4Q8NCT1 418 aa2.95□□□□□ -1.94
SCARNA3-201ENST00000517097 TTLL11Q8NHH1 800 aa2.95□□□□□ -1.94
SCARNA3-201ENST00000517097 CALML6Q8TD86 181 aa2.95□□□□□ -1.94
SCARNA3-201ENST00000517097 BRIX1Q8TDN6 353 aaKnown RBP2.95□□□□□ -1.94
SCARNA3-201ENST00000517097 OTUD7AQ8TE49 926 aaPredicted RBP2.95□□□□□ -1.94
SCARNA3-201ENST00000517097 UCMAQ8WVF2 138 aa2.95□□□□□ -1.94
SCARNA3-201ENST00000517097 MAML1Q92585 1016 aa2.95□□□□□ -1.94
SCARNA3-201ENST00000517097 RUBCNQ92622 972 aa2.95□□□□□ -1.94
SCARNA3-201ENST00000517097 HTRA1Q92743 480 aa2.95□□□□□ -1.94
SCARNA3-201ENST00000517097 NELL1Q92832 810 aa2.95□□□□□ -1.94
SCARNA3-201ENST00000517097 LENG1Q96BZ8 264 aaPredicted RBP2.95□□□□□ -1.94
SCARNA3-201ENST00000517097 ASIC4Q96FT7 647 aa2.95□□□□□ -1.94
SCARNA3-201ENST00000517097 PAWRQ96IZ0 340 aaKnown RBP2.95□□□□□ -1.94
SCARNA3-201ENST00000517097 MAP6Q96JE9 813 aa2.95□□□□□ -1.94
SCARNA3-201ENST00000517097 HHIPL1Q96JK4 782 aa2.95□□□□□ -1.94
SCARNA3-201ENST00000517097 MEGF10Q96KG7 1140 aa2.95□□□□□ -1.94
SCARNA3-201ENST00000517097 HIST1H2AHQ96KK5 128 aa2.95□□□□□ -1.94
SCARNA3-201ENST00000517097 P2RX7Q99572 595 aaKnown RBP2.95□□□□□ -1.94
SCARNA3-201ENST00000517097 HIST1H2AJQ99878 128 aa2.95□□□□□ -1.94
SCARNA3-201ENST00000517097 TREX2Q9BQ50 279 aaPredicted RBP2.95□□□□□ -1.94
SCARNA3-201ENST00000517097 SDF4Q9BRK5 362 aa2.95□□□□□ -1.94
SCARNA3-201ENST00000517097 FDXACB1Q9BRP7 624 aaPredicted RBP2.95□□□□□ -1.94
SCARNA3-201ENST00000517097 LSM14BQ9BX40 385 aaKnown RBP2.95□□□□□ -1.94
SCARNA3-201ENST00000517097 AMNQ9BXJ7 453 aa2.95□□□□□ -1.94
SCARNA3-201ENST00000517097 AP1M1Q9BXS5 423 aa2.95□□□□□ -1.94
SCARNA3-201ENST00000517097 TRIM54Q9BYV2 358 aa2.95□□□□□ -1.94
SCARNA3-201ENST00000517097 LMAN2LQ9H0V9 348 aa2.95□□□□□ -1.94
SCARNA3-201ENST00000517097 DHX36Q9H2U1 1008 aaKnown RBP2.95□□□□□ -1.94
SCARNA3-201ENST00000517097 WDCPQ9H6R7 721 aa2.95□□□□□ -1.94
SCARNA3-201ENST00000517097 SMURF2Q9HAU4 748 aa2.95□□□□□ -1.94
SCARNA3-201ENST00000517097 SH3GLB2Q9NR46 395 aa2.95□□□□□ -1.94
SCARNA3-201ENST00000517097 SLTMQ9NWH9 1034 aaKnown RBP eCLIP2.95□□□□□ -1.94
SCARNA3-201ENST00000517097 CALCOCO1Q9P1Z2 691 aa2.95□□□□□ -1.94
SCARNA3-201ENST00000517097 SRP68Q9UHB9 627 aaKnown RBP2.95□□□□□ -1.94
SCARNA3-201ENST00000517097 FEM1BQ9UK73 627 aa2.95□□□□□ -1.94
SCARNA3-201ENST00000517097 GPR34Q9UPC5 381 aa2.95□□□□□ -1.94
SCARNA3-201ENST00000517097 SCAF8Q9UPN6 1271 aaKnown RBP2.95□□□□□ -1.94
SCARNA3-201ENST00000517097 TRIM43BA6NCK2 446 aa2.94□□□□□ -1.94
SCARNA3-201ENST00000517097 SYNDIG1LA6NDD5 238 aa2.94□□□□□ -1.94
SCARNA3-201ENST00000517097 TOR1BO14657 336 aa2.94□□□□□ -1.94
SCARNA3-201ENST00000517097 PIP5K1BO14986 540 aa2.94□□□□□ -1.94
SCARNA3-201ENST00000517097 THAP12O43422 761 aa2.94□□□□□ -1.94
SCARNA3-201ENST00000517097 AKR1B10O60218 316 aa2.94□□□□□ -1.94
SCARNA3-201ENST00000517097 TBC1D4O60343 1298 aa2.94□□□□□ -1.94
SCARNA3-201ENST00000517097 USO1O60763 962 aaKnown RBP2.94□□□□□ -1.94
SCARNA3-201ENST00000517097 TMEM127O75204 238 aa2.94□□□□□ -1.94
SCARNA3-201ENST00000517097 FAM155BO75949 473 aa2.94□□□□□ -1.94
SCARNA3-201ENST00000517097 SEC24DO94855 1032 aaPredicted RBP2.94□□□□□ -1.94
SCARNA3-201ENST00000517097 ENDOD1O94919 500 aa2.94□□□□□ -1.94
SCARNA3-201ENST00000517097 H2AFB1P0C5Y9 115 aa2.94□□□□□ -1.94
SCARNA3-201ENST00000517097 H2AFB2P0C5Z0 115 aa2.94□□□□□ -1.94
SCARNA3-201ENST00000517097 MSL3P1P0C860 447 aa2.94□□□□□ -1.94
SCARNA3-201ENST00000517097 HDCP19113 662 aa2.94□□□□□ -1.94
SCARNA3-201ENST00000517097 PTGS1P23219 599 aa2.94□□□□□ -1.94
SCARNA3-201ENST00000517097 ADSLP30566 484 aaPredicted RBP2.94□□□□□ -1.94
SCARNA3-201ENST00000517097 GALNSP34059 522 aa2.94□□□□□ -1.94
SCARNA3-201ENST00000517097 THBS2P35442 1172 aa2.94□□□□□ -1.94
SCARNA3-201ENST00000517097 SLC6A9P48067 706 aa2.94□□□□□ -1.94
SCARNA3-201ENST00000517097 MAN2A2P49641 1150 aa2.94□□□□□ -1.94
SCARNA3-201ENST00000517097 FLT3LGP49771 235 aa2.94□□□□□ -1.94
SCARNA3-201ENST00000517097 NRG3P56975 720 aa2.94□□□□□ -1.94
SCARNA3-201ENST00000517097 NRG1Q02297 640 aaPredicted RBP2.94□□□□□ -1.94
SCARNA3-201ENST00000517097 CYP27A1Q02318 531 aa2.94□□□□□ -1.94
SCARNA3-201ENST00000517097 MVKQ03426 396 aa2.94□□□□□ -1.94
SCARNA3-201ENST00000517097 MGAT5Q09328 741 aa2.94□□□□□ -1.94
SCARNA3-201ENST00000517097 PLCL1Q15111 1095 aa2.94□□□□□ -1.94
SCARNA3-201ENST00000517097 DLGAP5Q15398 846 aa2.94□□□□□ -1.94
SCARNA3-201ENST00000517097 SURF1Q15526 300 aa2.94□□□□□ -1.94
SCARNA3-201ENST00000517097 SLC14A2Q15849 920 aa2.94□□□□□ -1.94
SCARNA3-201ENST00000517097 MEA1Q16626 185 aa2.94□□□□□ -1.94
SCARNA3-201ENST00000517097 FLYWCH1Q4VC44 716 aa2.94□□□□□ -1.94
SCARNA3-201ENST00000517097 ARTNQ5T4W7 220 aa2.94□□□□□ -1.94
SCARNA3-201ENST00000517097 RRAGBQ5VZM2 374 aa2.94□□□□□ -1.94
SCARNA3-201ENST00000517097 LRSAM1Q6UWE0 723 aa2.94□□□□□ -1.94
SCARNA3-201ENST00000517097 GADL1Q6ZQY3 521 aa2.94□□□□□ -1.94
SCARNA3-201ENST00000517097 RINLQ6ZS11 566 aa2.94□□□□□ -1.94
SCARNA3-201ENST00000517097 UNC13DQ70J99 1090 aa2.94□□□□□ -1.94
SCARNA3-201ENST00000517097 MILR1Q7Z6M3 343 aa2.94□□□□□ -1.94
SCARNA3-201ENST00000517097 C2CD5Q86YS7 1000 aa2.94□□□□□ -1.94
SCARNA3-201ENST00000517097 DCP2Q8IU60 420 aaKnown RBP2.94□□□□□ -1.94
SCARNA3-201ENST00000517097 CLEC10AQ8IUN9 316 aa2.94□□□□□ -1.94
SCARNA3-201ENST00000517097 TSPYL6Q8N831 410 aa2.94□□□□□ -1.94
SCARNA3-201ENST00000517097 NKAIN3Q8N8D7 197 aa2.94□□□□□ -1.94
SCARNA3-201ENST00000517097 FAM181AQ8N9Y4 354 aa2.94□□□□□ -1.94
SCARNA3-201ENST00000517097 GLIS1Q8NBF1 620 aa2.94□□□□□ -1.94
SCARNA3-201ENST00000517097 OR6B3Q8NGW1 331 aa2.94□□□□□ -1.94
SCARNA3-201ENST00000517097 IFI44Q8TCB0 444 aa2.94□□□□□ -1.94
SCARNA3-201ENST00000517097 KBTBD7Q8WVZ9 684 aa2.94□□□□□ -1.94
SCARNA3-201ENST00000517097 RFFLQ8WZ73 363 aa2.94□□□□□ -1.94
SCARNA3-201ENST00000517097 HOXB13Q92826 284 aaPredicted RBP2.94□□□□□ -1.94
SCARNA3-201ENST00000517097 TRIM43Q96BQ3 446 aaPredicted RBP2.94□□□□□ -1.94
SCARNA3-201ENST00000517097 HVCN1Q96D96 273 aa2.94□□□□□ -1.94
SCARNA3-201ENST00000517097 EID2BQ96D98 161 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms